RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 hADV38S2A0JD32 116 aa12.41□□□□□ -0.42
PNKP-204ENST00000594661 ERVK-16P61578 105 aa12.41□□□□□ -0.42
PNKP-204ENST00000594661 C5orf64Q2M2E5 130 aa12.41□□□□□ -0.42
PNKP-204ENST00000594661 C2orf91Q6ZV80 131 aa12.41□□□□□ -0.42
PNKP-204ENST00000594661 VKORC1L1Q8N0U8 176 aa12.41□□□□□ -0.42
PNKP-204ENST00000594661 OR4A16Q8NH70 328 aa12.41□□□□□ -0.42
PNKP-204ENST00000594661 OR4A5Q8NH83 315 aa12.41□□□□□ -0.42
PNKP-204ENST00000594661 MBD6Q96DN6 1003 aa12.41□□□□□ -0.42
PNKP-204ENST00000594661 ABCA4P78363 2273 aa12.41□□□□□ -0.42
PNKP-204ENST00000594661 SYS1-DBNDD2H3BUS1 97 aa12.41□□□□□ -0.42
PNKP-204ENST00000594661 SAA2P0DJI9 122 aaPredicted RBP12.41□□□□□ -0.42
PNKP-204ENST00000594661 KIR2DS2P43631 304 aa12.41□□□□□ -0.42
PNKP-204ENST00000594661 GCSAMLQ5JQS6 135 aa12.41□□□□□ -0.42
PNKP-204ENST00000594661 ZNF841Q6ZN19 808 aa12.41□□□□□ -0.42
PNKP-204ENST00000594661 FAM90A9PA6NNJ1 464 aa12.4□□□□□ -0.42
PNKP-204ENST00000594661 CCL3L1P16619 93 aa12.4□□□□□ -0.42
PNKP-204ENST00000594661 USF1P22415 310 aaPredicted RBP12.4□□□□□ -0.42
PNKP-204ENST00000594661 COL8A2P25067 703 aa12.4□□□□□ -0.42
PNKP-204ENST00000594661 CD300EQ496F6 205 aaPredicted RBP12.4□□□□□ -0.42
PNKP-204ENST00000594661 TMEM97Q5BJF2 176 aa12.4□□□□□ -0.42
PNKP-204ENST00000594661 TMEM191AQ9H0A3 160 aa12.4□□□□□ -0.42
PNKP-204ENST00000594661 THYN1Q9P016 225 aa12.4□□□□□ -0.42
PNKP-204ENST00000594661 WDR83OSQ9Y284 106 aa12.4□□□□□ -0.42
PNKP-204ENST00000594661 IZUMO1RA6ND01 250 aa12.4□□□□□ -0.43
PNKP-204ENST00000594661 RRHO14718 337 aa12.4□□□□□ -0.43
PNKP-204ENST00000594661 NDUFB3O43676 98 aa12.4□□□□□ -0.43
PNKP-204ENST00000594661 HTR1DP28221 377 aa12.4□□□□□ -0.43
PNKP-204ENST00000594661 TMEM200BQ69YZ2 307 aa12.4□□□□□ -0.43
PNKP-204ENST00000594661 ITLN2Q8WWU7 325 aaPredicted RBP12.4□□□□□ -0.43
PNKP-204ENST00000594661 DDB2Q92466 427 aa12.4□□□□□ -0.43
PNKP-204ENST00000594661 H1FXQ92522 213 aaKnown RBP12.4□□□□□ -0.43
PNKP-204ENST00000594661 RPUSD1Q9UJJ7 312 aaKnown RBP12.4□□□□□ -0.43
PNKP-204ENST00000594661 ISLRO14498 428 aa12.39□□□□□ -0.43
PNKP-204ENST00000594661 AREGP15514 252 aa12.39□□□□□ -0.43
PNKP-204ENST00000594661 SLC35B1P78383 322 aa12.39□□□□□ -0.43
PNKP-204ENST00000594661 MEF2CQ06413 473 aaPredicted RBP12.39□□□□□ -0.43
PNKP-204ENST00000594661 RAB31Q13636 194 aa12.39□□□□□ -0.43
PNKP-204ENST00000594661 RNASEKQ6P5S7 137 aaKnown RBP12.39□□□□□ -0.43
PNKP-204ENST00000594661 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.39□□□□□ -0.43
PNKP-204ENST00000594661 TMEM140Q9NV12 185 aa12.39□□□□□ -0.43
PNKP-204ENST00000594661 ZNRD1Q9P1U0 126 aa12.39□□□□□ -0.43
PNKP-204ENST00000594661 GAGE12HA6NDE8 117 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 A6NDN8 102 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 OR2J3O76001 311 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 PPOXP50336 477 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 FAM162BQ5T6X4 162 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 OR10AG1Q8NH19 301 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 OR2T6Q8NHC8 308 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 VSTM2AQ8TAG5 236 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 SPATA25Q9BR10 227 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 ZNF331Q9NQX6 463 aaPredicted RBP12.38□□□□□ -0.43
PNKP-204ENST00000594661 KAAG1Q9UBP8 84 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 CFAP46Q8IYW2 2715 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 TRAV3A0A0B4J244 114 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 C15orf62A8K5M9 175 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 COX8AP10176 69 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 ZNF714Q96N38 554 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 ACACBO00763 2458 aa12.38□□□□□ -0.43
PNKP-204ENST00000594661 SPTBN1Q01082 2364 aaKnown RBP12.38□□□□□ -0.43
PNKP-204ENST00000594661 TET2Q6N021 2002 aaPredicted RBP12.37□□□□□ -0.43
PNKP-204ENST00000594661 A0A0G2JLM5 398 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 TEX48A0A1B0GUV7 120 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 H3BUT2 72 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 GNG4P50150 75 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 TCL1AP56279 114 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 TMEM30BQ3MIR4 351 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 CENPWQ5EE01 88 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 CCDC144NLQ6NUI1 221 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 URB1-AS1Q96HZ7 61 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 RNASE7Q9H1E1 156 aaKnown RBP12.37□□□□□ -0.43
PNKP-204ENST00000594661 IGSF10Q6WRI0 2623 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 A0A1W2PPR1 153 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 LY6HO94772 140 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 HIST1H1EP10412 219 aaKnown RBP12.37□□□□□ -0.43
PNKP-204ENST00000594661 OPRK1P41145 380 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 SLC25A48Q6ZT89 311 aaKnown RBP12.37□□□□□ -0.43
PNKP-204ENST00000594661 BPIFA4PQ86YQ2 179 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 OR52E5Q8NH55 327 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 MRAP2Q96G30 205 aa12.37□□□□□ -0.43
PNKP-204ENST00000594661 HEYLQ9NQ87 328 aaPredicted RBP12.37□□□□□ -0.43
PNKP-204ENST00000594661 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.36□□□□□ -0.43
PNKP-204ENST00000594661 MPDU1O75352 247 aa12.36□□□□□ -0.43
PNKP-204ENST00000594661 GCHFRP30047 84 aa12.36□□□□□ -0.43
PNKP-204ENST00000594661 C11orf71Q6IPW1 123 aa12.36□□□□□ -0.43
PNKP-204ENST00000594661 FOXI2Q6ZQN5 318 aa12.36□□□□□ -0.43
PNKP-204ENST00000594661 ADTRPQ96IZ2 230 aa12.36□□□□□ -0.43
PNKP-204ENST00000594661 A0A1W2PPM0 123 aa12.35□□□□□ -0.43
PNKP-204ENST00000594661 FXYD3Q14802 87 aa12.35□□□□□ -0.43
PNKP-204ENST00000594661 MTURNQ8N3F0 131 aa12.35□□□□□ -0.43
PNKP-204ENST00000594661 C19orf84I3L1E1 186 aa12.35□□□□□ -0.43
PNKP-204ENST00000594661 RALYQ9UKM9 306 aaKnown RBP12.35□□□□□ -0.43
PNKP-204ENST00000594661 TSSC4Q9Y5U2 329 aaPredicted RBP12.35□□□□□ -0.43
PNKP-204ENST00000594661 SPCS1Q9Y6A9 102 aa12.35□□□□□ -0.43
PNKP-204ENST00000594661 HELTA6NFD8 242 aa12.34□□□□□ -0.43
PNKP-204ENST00000594661 VDAC2P45880 294 aaPredicted RBP12.34□□□□□ -0.43
PNKP-204ENST00000594661 DLX6P56179 175 aa12.34□□□□□ -0.43
PNKP-204ENST00000594661 PDLIM3Q53GG5 364 aaPredicted RBP12.34□□□□□ -0.43
PNKP-204ENST00000594661 PERPQ96FX8 193 aa12.34□□□□□ -0.43
PNKP-204ENST00000594661 TCF19Q9Y242 345 aa12.34□□□□□ -0.43
PNKP-204ENST00000594661 C15orf61A6NNL5 157 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms