RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 NSD1Q96L73 2696 aaPredicted RBP11.77□□□□□ -0.52
VRK3-207ENST00000594092 CYSRT1A8MQ03 144 aa11.77□□□□□ -0.52
VRK3-207ENST00000594092 CLEC3BP05452 202 aa11.77□□□□□ -0.52
VRK3-207ENST00000594092 PSMB8P28062 276 aa11.77□□□□□ -0.52
VRK3-207ENST00000594092 CD81P60033 236 aa11.77□□□□□ -0.52
VRK3-207ENST00000594092 UBE2G2P60604 165 aa11.77□□□□□ -0.52
VRK3-207ENST00000594092 LYZP61626 148 aa11.77□□□□□ -0.52
VRK3-207ENST00000594092 CLEC19AQ6UXS0 136 aa11.77□□□□□ -0.52
VRK3-207ENST00000594092 Q6ZSV7 163 aa11.77□□□□□ -0.52
VRK3-207ENST00000594092 OR4F5Q8NH21 305 aa11.77□□□□□ -0.52
VRK3-207ENST00000594092 UHRF2Q96PU4 802 aa11.77□□□□□ -0.52
VRK3-207ENST00000594092 OR4F4Q96R69 305 aa11.77□□□□□ -0.52
VRK3-207ENST00000594092 TMEM89A2RUT3 159 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 C11orf94C9JXX5 98 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 CST9LP1Q5W188 147 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 ATRAIDQ6UW56 229 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 OR51G1Q8NGK1 321 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 ATP6V0BQ99437 205 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 TXNDC17Q9BRA2 123 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 SLC25A2Q9BXI2 301 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 GAR1Q9NY12 217 aaKnown RBP11.76□□□□□ -0.53
VRK3-207ENST00000594092 TMEM250H0YL14 139 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 NUPL2O15504 423 aaKnown RBP11.76□□□□□ -0.53
VRK3-207ENST00000594092 SLC35B1P78383 322 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 MORN5Q5VZ52 161 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 OR5AU1Q8NGC0 362 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 HIGD1AQ9Y241 93 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 ARL2-SNX15V9GYD0 113 aa11.76□□□□□ -0.53
VRK3-207ENST00000594092 TRAV5A0A0B4J249 113 aa11.75□□□□□ -0.53
VRK3-207ENST00000594092 TGOLN2O43493 480 aa11.75□□□□□ -0.53
VRK3-207ENST00000594092 PDE6DO43924 150 aa11.75□□□□□ -0.53
VRK3-207ENST00000594092 RPL15P61313 204 aaKnown RBP11.75□□□□□ -0.53
VRK3-207ENST00000594092 FAM90A2PQ658T7 463 aa11.75□□□□□ -0.53
VRK3-207ENST00000594092 ZNF491Q8N8L2 437 aa11.75□□□□□ -0.53
VRK3-207ENST00000594092 CLRN3Q8NCR9 226 aa11.75□□□□□ -0.53
VRK3-207ENST00000594092 Q8WTZ3 238 aa11.75□□□□□ -0.53
VRK3-207ENST00000594092 ZNF503Q96F45 646 aa11.75□□□□□ -0.53
VRK3-207ENST00000594092 ZNF414Q96IQ9 312 aa11.75□□□□□ -0.53
VRK3-207ENST00000594092 FAM167A-AS1Q96KT0 104 aa11.75□□□□□ -0.53
VRK3-207ENST00000594092 NF1P21359 2839 aa11.75□□□□□ -0.53
VRK3-207ENST00000594092 FN1P02751 2386 aaKnown RBP11.75□□□□□ -0.53
VRK3-207ENST00000594092 A0A0G2JLM5 398 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 WI2-2373I1.2A0A1W2PRP0 233 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 OR2C1O95371 312 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 IGHV3-11P01762 117 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 IL4P05112 153 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 ATP5G3P48201 142 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 FOXE3Q13461 319 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 KIAA0141Q14154 515 aaPredicted RBP11.74□□□□□ -0.53
VRK3-207ENST00000594092 TEX38Q6PEX7 206 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 STXBP6Q8NFX7 210 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 RNF125Q96EQ8 232 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 NIPSNAP3BQ9BS92 247 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 PUS1Q9Y606 427 aaKnown RBP eCLIP11.74□□□□□ -0.53
VRK3-207ENST00000594092 F8P00451 2351 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 FAM74A7A6NL05 159 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 F6UZH7 168 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 ELANEP08246 267 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 UBE2L3P68036 154 aaKnown RBP11.74□□□□□ -0.53
VRK3-207ENST00000594092 SUN5Q8TC36 379 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 PAXXQ9BUH6 204 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 OR51M1Q9H341 326 aa11.74□□□□□ -0.53
VRK3-207ENST00000594092 MRPL27Q9P0M9 148 aaKnown RBP11.74□□□□□ -0.53
VRK3-207ENST00000594092 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.73□□□□□ -0.53
VRK3-207ENST00000594092 IGHV3-35A0A0C4DH35 117 aa11.73□□□□□ -0.53
VRK3-207ENST00000594092 PPP5D1E7EU14 171 aa11.73□□□□□ -0.53
VRK3-207ENST00000594092 M0R036 132 aa11.73□□□□□ -0.53
VRK3-207ENST00000594092 CRYBA1P05813 215 aa11.73□□□□□ -0.53
VRK3-207ENST00000594092 OR10J4P0C629 311 aa11.73□□□□□ -0.53
VRK3-207ENST00000594092 ZNF343Q6P1L6 599 aa11.73□□□□□ -0.53
VRK3-207ENST00000594092 ZNF600Q6ZNG1 722 aa11.73□□□□□ -0.53
VRK3-207ENST00000594092 S100A7AQ86SG5 101 aa11.73□□□□□ -0.53
VRK3-207ENST00000594092 JMJD8Q96S16 334 aa11.73□□□□□ -0.53
VRK3-207ENST00000594092 GNB4Q9HAV0 340 aa11.73□□□□□ -0.53
VRK3-207ENST00000594092 YTHDF2Q9Y5A9 579 aaKnown RBP11.73□□□□□ -0.53
VRK3-207ENST00000594092 H3BQ15 152 aa11.72□□□□□ -0.53
VRK3-207ENST00000594092 TRBV12-3P01733 135 aa11.72□□□□□ -0.53
VRK3-207ENST00000594092 RPLP1P05386 114 aaKnown RBP11.72□□□□□ -0.53
VRK3-207ENST00000594092 BTN1A1Q13410 526 aa11.72□□□□□ -0.53
VRK3-207ENST00000594092 USF2Q15853 346 aaPredicted RBP11.72□□□□□ -0.53
VRK3-207ENST00000594092 RNF152Q8N8N0 203 aa11.72□□□□□ -0.53
VRK3-207ENST00000594092 OR4X2Q8NGF9 303 aa11.72□□□□□ -0.53
VRK3-207ENST00000594092 MYOZ3Q8TDC0 251 aa11.72□□□□□ -0.53
VRK3-207ENST00000594092 SLC25A39Q9BZJ4 359 aaPredicted RBP11.72□□□□□ -0.53
VRK3-207ENST00000594092 ZNF727A8MUV8 499 aa11.72□□□□□ -0.53
VRK3-207ENST00000594092 CRLF1O75462 422 aa11.72□□□□□ -0.53
VRK3-207ENST00000594092 PYYP10082 97 aa11.72□□□□□ -0.53
VRK3-207ENST00000594092 ARL3P36405 182 aa11.72□□□□□ -0.53
VRK3-207ENST00000594092 FAM74A3Q4VXF1 159 aa11.72□□□□□ -0.53
VRK3-207ENST00000594092 AWAT1Q58HT5 328 aa11.72□□□□□ -0.53
VRK3-207ENST00000594092 RPUSD4Q96CM3 377 aaKnown RBP11.72□□□□□ -0.53
VRK3-207ENST00000594092 TVP23CQ96ET8 276 aa11.72□□□□□ -0.53
VRK3-207ENST00000594092 RELQ04864 619 aaPredicted RBP11.71□□□□□ -0.54
VRK3-207ENST00000594092 TOMM20LQ6UXN7 152 aa11.71□□□□□ -0.54
VRK3-207ENST00000594092 KLHDC1Q8N7A1 406 aa11.71□□□□□ -0.54
VRK3-207ENST00000594092 SMIM7Q9BQ49 75 aa11.71□□□□□ -0.54
VRK3-207ENST00000594092 C20orf24Q9BUV8 137 aa11.71□□□□□ -0.54
VRK3-207ENST00000594092 PARLQ9H300 379 aa11.71□□□□□ -0.54
VRK3-207ENST00000594092 A0A1W2PRE2 83 aa11.7□□□□□ -0.54
VRK3-207ENST00000594092 RHEBQ15382 184 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms