RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 PSMB3P49720 205 aa11.13□□□□□ -0.63
TRIM28-203ENST00000593582 PAX9P55771 341 aa11.13□□□□□ -0.63
TRIM28-203ENST00000593582 ZNF846Q147U1 533 aa11.13□□□□□ -0.63
TRIM28-203ENST00000593582 PLECQ15149 4684 aaKnown RBP11.13□□□□□ -0.63
TRIM28-203ENST00000593582 SAMD13Q5VXD3 122 aa11.13□□□□□ -0.63
TRIM28-203ENST00000593582 ZBTB8BQ8NAP8 495 aaPredicted RBP11.13□□□□□ -0.63
TRIM28-203ENST00000593582 TMEM147Q9BVK8 224 aa11.13□□□□□ -0.63
TRIM28-203ENST00000593582 WDR12Q9GZL7 423 aaKnown RBP11.13□□□□□ -0.63
TRIM28-203ENST00000593582 MFFQ9GZY8 342 aa11.13□□□□□ -0.63
TRIM28-203ENST00000593582 KLK5Q9Y337 293 aaPredicted RBP11.13□□□□□ -0.63
TRIM28-203ENST00000593582 DNAH1Q9P2D7 4330 aa11.13□□□□□ -0.63
TRIM28-203ENST00000593582 METTL15P1P0C7V9 234 aa11.12□□□□□ -0.63
TRIM28-203ENST00000593582 GATA2P23769 480 aaPredicted RBP11.12□□□□□ -0.63
TRIM28-203ENST00000593582 GALR1P47211 349 aa11.12□□□□□ -0.63
TRIM28-203ENST00000593582 TAS2R30P59541 319 aa11.12□□□□□ -0.63
TRIM28-203ENST00000593582 TMEM14EPQ6UXP3 125 aa11.12□□□□□ -0.63
TRIM28-203ENST00000593582 OR10P1Q8NGE3 313 aa11.12□□□□□ -0.63
TRIM28-203ENST00000593582 OR1B1Q8NGR6 318 aa11.12□□□□□ -0.63
TRIM28-203ENST00000593582 C11orf45Q8TAV5 145 aa11.12□□□□□ -0.63
TRIM28-203ENST00000593582 S100ZQ8WXG8 99 aa11.12□□□□□ -0.63
TRIM28-203ENST00000593582 LINC00052Q96N35 136 aa11.12□□□□□ -0.63
TRIM28-203ENST00000593582 C1QTNF4Q9BXJ3 329 aa11.12□□□□□ -0.63
TRIM28-203ENST00000593582 SLC25A22Q9H936 323 aa11.12□□□□□ -0.63
TRIM28-203ENST00000593582 FAM240BA0A1B0GVZ2 78 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 ZNF98A6NK75 572 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 PMS2P5A8MQ11 134 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 FAM25EA8MYX2 175 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 H3BMM0 161 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 DEFB4AO15263 64 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 TSC22D2O75157 780 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 IL5P05113 134 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 HLA-DRB4P13762 266 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 MEOX2P50222 304 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 RRAS2P62070 204 aaPredicted RBP11.11□□□□□ -0.63
TRIM28-203ENST00000593582 DLK1P80370 383 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 MZT2BQ6NZ67 158 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 TMEM182Q6ZP80 229 aaPredicted RBP11.11□□□□□ -0.63
TRIM28-203ENST00000593582 CYP2G1PQ6ZSU1 146 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 ZNF431Q8TF32 576 aaPredicted RBP11.11□□□□□ -0.63
TRIM28-203ENST00000593582 PHLDA1Q8WV24 401 aaPredicted RBP11.11□□□□□ -0.63
TRIM28-203ENST00000593582 CLEC5AQ9NY25 188 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 TBC1D24Q9ULP9 559 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 RCL1Q9Y2P8 373 aaKnown RBP11.11□□□□□ -0.63
TRIM28-203ENST00000593582 HLA-DRB4X5D2U9 266 aa11.11□□□□□ -0.63
TRIM28-203ENST00000593582 C7orf66A4D0T2 115 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 ZNF705EA8MWA4 302 aaPredicted RBP11.1□□□□□ -0.63
TRIM28-203ENST00000593582 FNDC10F2Z333 226 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 ISLRO14498 428 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 CCSO14618 274 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 MBPP02686 304 aaPredicted RBP11.1□□□□□ -0.63
TRIM28-203ENST00000593582 H2AFB2P0C5Z0 115 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 MIFP14174 115 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 NANOS2P60321 138 aaKnown RBP11.1□□□□□ -0.63
TRIM28-203ENST00000593582 SELENOTP62341 195 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 FOXI2Q6ZQN5 318 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 Q8NAQ8 132 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 GPR82Q96P67 336 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 SEC22CQ9BRL7 303 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 SLC25A32Q9H2D1 315 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 NPVFQ9HCQ7 196 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 MGAT4CQ9UBM8 478 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 AGRNO00468 2067 aa11.1□□□□□ -0.63
TRIM28-203ENST00000593582 C5orf51A6NDU8 294 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 L7N2F9 121 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 SOCS3O14543 225 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 CCNKO75909 580 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 RAP2BP61225 183 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 VAMP2P63027 116 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 TEPPQ6URK8 271 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 S100A7AQ86SG5 101 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 C12orf45Q8N5I9 185 aaPredicted RBP11.09□□□□□ -0.63
TRIM28-203ENST00000593582 CSNK1G2-AS1Q8NCQ2 148 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 C16orf92Q96LL3 132 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 RSG1Q9BU20 258 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 SAV1Q9H4B6 383 aaPredicted RBP11.09□□□□□ -0.63
TRIM28-203ENST00000593582 DOK5Q9P104 306 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 XCL2Q9UBD3 114 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 HIGD1AQ9Y241 93 aa11.09□□□□□ -0.63
TRIM28-203ENST00000593582 IGHV4-28A0A0C4DH34 117 aa11.08□□□□□ -0.64
TRIM28-203ENST00000593582 HYPMO75409 117 aa11.08□□□□□ -0.64
TRIM28-203ENST00000593582 LINC00869P0C866 280 aa11.08□□□□□ -0.64
TRIM28-203ENST00000593582 GDF5OSQ5U4N7 250 aa11.08□□□□□ -0.64
TRIM28-203ENST00000593582 SPATA31B1PQ5VZV4 182 aa11.08□□□□□ -0.64
TRIM28-203ENST00000593582 LINC00476Q8WZB0 136 aa11.08□□□□□ -0.64
TRIM28-203ENST00000593582 GGACTQ9BVM4 153 aa11.08□□□□□ -0.64
TRIM28-203ENST00000593582 SLC25A39Q9BZJ4 359 aaPredicted RBP11.08□□□□□ -0.64
TRIM28-203ENST00000593582 IGKV3-20P01619 116 aa11.07□□□□□ -0.64
TRIM28-203ENST00000593582 OR5G3P0C626 314 aa11.07□□□□□ -0.64
TRIM28-203ENST00000593582 RBMY1A1P0DJD3 496 aaKnown RBP11.07□□□□□ -0.64
TRIM28-203ENST00000593582 RBMY1CP0DJD4 496 aa11.07□□□□□ -0.64
TRIM28-203ENST00000593582 DEFB1P60022 68 aa11.07□□□□□ -0.64
TRIM28-203ENST00000593582 ASAH1Q13510 395 aa11.07□□□□□ -0.64
TRIM28-203ENST00000593582 RBMY1FQ15415 496 aaKnown RBP11.07□□□□□ -0.64
TRIM28-203ENST00000593582 EBLN2Q6P2I7 272 aa11.07□□□□□ -0.64
TRIM28-203ENST00000593582 OR4B1Q8NGF8 309 aa11.07□□□□□ -0.64
TRIM28-203ENST00000593582 C2orf50Q96LR7 162 aa11.07□□□□□ -0.64
TRIM28-203ENST00000593582 SHANK2-AS3Q9BTD1 123 aa11.07□□□□□ -0.64
TRIM28-203ENST00000593582 SCRT1Q9BWW7 348 aa11.07□□□□□ -0.64
TRIM28-203ENST00000593582 HRH4Q9H3N8 390 aa11.07□□□□□ -0.64
TRIM28-203ENST00000593582 RPRMQ9NS64 109 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms