RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 VMO1Q7Z5L0 202 aa10.42□□□□□ -0.74
DNMT1-228ENST00000592705 RNF166Q96A37 237 aaPredicted RBP10.42□□□□□ -0.74
DNMT1-228ENST00000592705 CA1P00915 261 aaPredicted RBP10.41□□□□□ -0.74
DNMT1-228ENST00000592705 OR5AN1Q8NGI8 311 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 MBNL3Q9NUK0 354 aaKnown RBP10.41□□□□□ -0.74
DNMT1-228ENST00000592705 MUC21A0A0G2JKD1 596 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 MUC21A0A140T8X8 626 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 FNDC10F2Z333 226 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 J3QLI3 93 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 NPFFO15130 113 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 MUC21Q5SSG8 566 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 ASCL2Q99929 193 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 TMEM155Q4W5P6 130 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 SLC50A1Q9BRV3 221 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 TECTAO75443 2155 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 LY6G6EA0A0G2JKS1 128 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 H7C2G1 150 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 TMEM167AQ8TBQ9 72 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 U3KQA8 63 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 TMEM178BH3BS89 294 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 TMEM256Q8N2U0 113 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 ST20Q9HBF5 79 aa10.41□□□□□ -0.74
DNMT1-228ENST00000592705 SONP18583 2426 aaKnown RBP10.4□□□□□ -0.74
DNMT1-228ENST00000592705 NOTCH3Q9UM47 2321 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 TRGV2A0A075B6R0 118 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 IGHV3-49A0A0A0MS15 119 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 IGHV3-66A0A0C4DH42 116 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 HBDP02042 147 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 SELLP14151 372 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 ZNF56Q15929 161 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 HS3ST6Q96QI5 342 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 MPDZO75970 2070 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 TMEM262E9PQX1 116 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 SCGB3A1Q96QR1 104 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 ALKBH7Q9BT30 221 aaPredicted RBP10.4□□□□□ -0.74
DNMT1-228ENST00000592705 M0R1W7 72 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 M0R381 172 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 MLNRO43193 412 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 PPBPP02775 128 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 SLX1AQ9BQ83 275 aa10.4□□□□□ -0.74
DNMT1-228ENST00000592705 DEFB113Q30KQ7 82 aa10.4□□□□□ -0.75
DNMT1-228ENST00000592705 MCRIP2Q9BUT9 160 aaKnown RBP10.4□□□□□ -0.75
DNMT1-228ENST00000592705 ZNF256Q9Y2P7 627 aaPredicted RBP10.4□□□□□ -0.75
DNMT1-228ENST00000592705 LEPP41159 167 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 PRSS8Q16651 343 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 MRPL52Q86TS9 123 aaKnown RBP10.39□□□□□ -0.75
DNMT1-228ENST00000592705 LINC01587Q99440 93 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 TRGV9Q99603 122 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 LIME1Q9H400 295 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 E7EQL1 145 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 PAX9P55771 341 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 FAM74A4Q5TZK3 123 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 SLC25A48Q6ZT89 311 aaKnown RBP10.39□□□□□ -0.75
DNMT1-228ENST00000592705 KLHL30-AS1Q8NEE0 82 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 DUX3Q96PT4 197 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 IGKV1D-17A0A075B6S4 117 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 TRAV41A0A0B4J266 112 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 TMEM200BQ69YZ2 307 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 C2orf88Q9BSF0 95 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 HIVEP2P31629 2446 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 WIPF3A6NGB9 483 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 PRB3Q04118 309 aaPredicted RBP10.39□□□□□ -0.75
DNMT1-228ENST00000592705 FAM110DQ8TAY7 271 aaPredicted RBP10.39□□□□□ -0.75
DNMT1-228ENST00000592705 COPS9Q8WXC6 57 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 PRO3102Q9H379 93 aa10.39□□□□□ -0.75
DNMT1-228ENST00000592705 MED12Q93074 2177 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 NCOR2Q9Y618 2525 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.38□□□□□ -0.75
DNMT1-228ENST00000592705 IGLV3-1P01715 115 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 CD24P25063 80 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 ADIPOQQ15848 244 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 SPCS1Q9Y6A9 102 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 TANC1Q9C0D5 1861 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 ITGB1BP1O14713 200 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 CEACAM8P31997 349 aaPredicted RBP10.38□□□□□ -0.75
DNMT1-228ENST00000592705 C3orf36Q3SXR2 165 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 C10orf55Q5SWW7 151 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 FAM169BQ8N8A8 192 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 MS4A6AQ9H2W1 248 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 H0YJW9 148 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 LY6HO94772 140 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 GZMBP10144 247 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 PAX1P15863 534 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 ZNF124Q15973 351 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 C5orf30Q96GV9 206 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 NXT2Q9NPJ8 142 aaKnown RBP10.38□□□□□ -0.75
DNMT1-228ENST00000592705 CACNA1DQ01668 2161 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 PRSS2P07478 247 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 FBLN7Q53RD9 439 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 TMEM219Q86XT9 240 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 GAFA1Q96PS6 74 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 PROK2Q9HC23 129 aa10.38□□□□□ -0.75
DNMT1-228ENST00000592705 MRPL27Q9P0M9 148 aaKnown RBP10.38□□□□□ -0.75
DNMT1-228ENST00000592705 TMEM50AO95807 157 aa10.37□□□□□ -0.75
DNMT1-228ENST00000592705 LMO1P25800 156 aa10.37□□□□□ -0.75
DNMT1-228ENST00000592705 IL15RAQ13261 267 aa10.37□□□□□ -0.75
DNMT1-228ENST00000592705 PLXND1Q9Y4D7 1925 aa10.37□□□□□ -0.75
DNMT1-228ENST00000592705 CEACAM4O75871 244 aa10.37□□□□□ -0.75
DNMT1-228ENST00000592705 PFN1P07737 140 aaKnown RBP10.37□□□□□ -0.75
DNMT1-228ENST00000592705 IGHV1-8P0DP01 117 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms