RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 S100A10P60903 97 aa11.55□□□□□ -0.56
LIG3-215ENST00000592690 RAB32Q13637 225 aa11.55□□□□□ -0.56
LIG3-215ENST00000592690 CASC10Q5T4H9 136 aa11.55□□□□□ -0.56
LIG3-215ENST00000592690 CYP2G1PQ6ZSU1 146 aa11.55□□□□□ -0.56
LIG3-215ENST00000592690 BPIFCQ8NFQ6 507 aa11.55□□□□□ -0.56
LIG3-215ENST00000592690 PPP1R14BQ96C90 147 aa11.55□□□□□ -0.56
LIG3-215ENST00000592690 MGAT4CQ9UBM8 478 aa11.55□□□□□ -0.56
LIG3-215ENST00000592690 PFDN2Q9UHV9 154 aa11.55□□□□□ -0.56
LIG3-215ENST00000592690 KNCNA6PVL3 124 aa11.54□□□□□ -0.56
LIG3-215ENST00000592690 LYL1P12980 280 aa11.54□□□□□ -0.56
LIG3-215ENST00000592690 ORM2P19652 201 aa11.54□□□□□ -0.56
LIG3-215ENST00000592690 BCAP31P51572 246 aa11.54□□□□□ -0.56
LIG3-215ENST00000592690 PSMG4Q5JS54 123 aa11.54□□□□□ -0.56
LIG3-215ENST00000592690 RNF183Q96D59 192 aa11.54□□□□□ -0.56
LIG3-215ENST00000592690 MARVELD1Q9BSK0 173 aa11.54□□□□□ -0.56
LIG3-215ENST00000592690 CSTL1Q9H114 145 aa11.54□□□□□ -0.56
LIG3-215ENST00000592690 TP53TG1Q9Y2A0 90 aa11.54□□□□□ -0.56
LIG3-215ENST00000592690 FAM24AA6NFZ4 105 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 FNDC10F2Z333 226 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 GOSR2O14653 212 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 PRAF2O60831 178 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 SIX6O95475 246 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 CAV2P51636 162 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 SLC38A11Q08AI6 406 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 C1orf194Q5T5A4 169 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 ZFAND6Q6FIF0 208 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 TRPT1Q86TN4 253 aaKnown RBP11.53□□□□□ -0.56
LIG3-215ENST00000592690 STHQ8IWL8 128 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 OR1B1Q8NGR6 318 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 SLC25A32Q9H2D1 315 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 NPVFQ9HCQ7 196 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 DOK5Q9P104 306 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 FBXL17Q9UF56 701 aa11.53□□□□□ -0.56
LIG3-215ENST00000592690 ZNF98A6NK75 572 aa11.52□□□□□ -0.57
LIG3-215ENST00000592690 CST7O76096 145 aa11.52□□□□□ -0.57
LIG3-215ENST00000592690 LINC00869P0C866 280 aa11.52□□□□□ -0.57
LIG3-215ENST00000592690 PVALBP20472 110 aaPredicted RBP11.52□□□□□ -0.57
LIG3-215ENST00000592690 ACTL10Q5JWF8 245 aa11.52□□□□□ -0.57
LIG3-215ENST00000592690 TEPPQ6URK8 271 aa11.52□□□□□ -0.57
LIG3-215ENST00000592690 OR8I2Q8N0Y5 310 aa11.52□□□□□ -0.57
LIG3-215ENST00000592690 SLC25A22Q9H936 323 aa11.52□□□□□ -0.57
LIG3-215ENST00000592690 SLC45A2Q9UMX9 530 aa11.52□□□□□ -0.57
LIG3-215ENST00000592690 IGSF23A1L1A6 192 aa11.51□□□□□ -0.57
LIG3-215ENST00000592690 SOCS3O14543 225 aa11.51□□□□□ -0.57
LIG3-215ENST00000592690 DEDDO75618 318 aa11.51□□□□□ -0.57
LIG3-215ENST00000592690 CA1P00915 261 aaPredicted RBP11.51□□□□□ -0.57
LIG3-215ENST00000592690 SNRPD3P62318 126 aaKnown RBP11.51□□□□□ -0.57
LIG3-215ENST00000592690 TMEM217Q8N7C4 229 aa11.51□□□□□ -0.57
LIG3-215ENST00000592690 TMEM147Q9BVK8 224 aa11.51□□□□□ -0.57
LIG3-215ENST00000592690 GGACTQ9BVM4 153 aa11.51□□□□□ -0.57
LIG3-215ENST00000592690 SCRT1Q9BWW7 348 aa11.51□□□□□ -0.57
LIG3-215ENST00000592690 SEPSECSQ9HD40 501 aaKnown RBP11.51□□□□□ -0.57
LIG3-215ENST00000592690 LYRM2Q9NU23 88 aaPredicted RBP11.51□□□□□ -0.57
LIG3-215ENST00000592690 CSMD3Q7Z407 3707 aa11.51□□□□□ -0.57
LIG3-215ENST00000592690 H3BRN7 92 aa11.5□□□□□ -0.57
LIG3-215ENST00000592690 AGPAT2O15120 278 aa11.5□□□□□ -0.57
LIG3-215ENST00000592690 DEFB1P60022 68 aa11.5□□□□□ -0.57
LIG3-215ENST00000592690 PLP1P60201 277 aa11.5□□□□□ -0.57
LIG3-215ENST00000592690 SELENOTP62341 195 aa11.5□□□□□ -0.57
LIG3-215ENST00000592690 C17orf77Q96MU5 243 aa11.5□□□□□ -0.57
LIG3-215ENST00000592690 MGST2Q99735 147 aa11.5□□□□□ -0.57
LIG3-215ENST00000592690 SLC25A39Q9BZJ4 359 aaPredicted RBP11.5□□□□□ -0.57
LIG3-215ENST00000592690 HIGD1AQ9Y241 93 aa11.5□□□□□ -0.57
LIG3-215ENST00000592690 A0A0J9YWU9 116 aa11.49□□□□□ -0.57
LIG3-215ENST00000592690 GIG44P09565 113 aaPredicted RBP11.49□□□□□ -0.57
LIG3-215ENST00000592690 OR5G3P0C626 314 aa11.49□□□□□ -0.57
LIG3-215ENST00000592690 C4BPBP20851 252 aa11.49□□□□□ -0.57
LIG3-215ENST00000592690 EWSR1Q01844 656 aaKnown RBP eCLIP11.49□□□□□ -0.57
LIG3-215ENST00000592690 TMEM252Q8N6L7 170 aa11.49□□□□□ -0.57
LIG3-215ENST00000592690 UHRF2Q96PU4 802 aa11.49□□□□□ -0.57
LIG3-215ENST00000592690 ARL6Q9H0F7 186 aa11.49□□□□□ -0.57
LIG3-215ENST00000592690 DYNC2H1Q8NCM8 4307 aaKnown RBP11.49□□□□□ -0.57
LIG3-215ENST00000592690 STARD9Q9P2P6 4700 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 HYPMO75409 117 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 GALR1P47211 349 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 PSMB3P49720 205 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 SULT1A1P50225 295 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 H2BFSP57053 126 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 RAP2BP61225 183 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 LRRC37A5PQ49AS3 106 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 GDF5OSQ5U4N7 250 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 PATE2Q6UY27 113 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 ZNF546Q86UE3 836 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 GATAD1Q8WUU5 269 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 LINC00052Q96N35 136 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 SHANK2-AS3Q9BTD1 123 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 NMES1Q9C002 83 aa11.48□□□□□ -0.57
LIG3-215ENST00000592690 UBE2L5PA0A1B0GUS4 154 aa11.47□□□□□ -0.57
LIG3-215ENST00000592690 SSNA1O43805 119 aa11.47□□□□□ -0.57
LIG3-215ENST00000592690 SPP1P10451 314 aa11.47□□□□□ -0.57
LIG3-215ENST00000592690 ID1P41134 155 aa11.47□□□□□ -0.57
LIG3-215ENST00000592690 VWC2Q2TAL6 325 aa11.47□□□□□ -0.57
LIG3-215ENST00000592690 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.47□□□□□ -0.57
LIG3-215ENST00000592690 STX12Q86Y82 276 aa11.47□□□□□ -0.57
LIG3-215ENST00000592690 RSG1Q9BU20 258 aa11.47□□□□□ -0.57
LIG3-215ENST00000592690 UQCC1Q9NVA1 299 aa11.47□□□□□ -0.57
LIG3-215ENST00000592690 OR5AC2Q9NZP5 309 aa11.47□□□□□ -0.57
LIG3-215ENST00000592690 H0YIZ8 118 aa11.46□□□□□ -0.57
LIG3-215ENST00000592690 H3BMM0 161 aa11.46□□□□□ -0.57
LIG3-215ENST00000592690 ISLRO14498 428 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms