RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 TMEM200BQ69YZ2 307 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 TCF24Q7RTU0 167 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 ZNF738Q8NE65 137 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 OR1B1Q8NGR6 318 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 TMEM186Q96B77 213 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 CHCHD1Q96BP2 118 aaKnown RBP8.7□□□□□ -1.02
VPS4B-206ENST00000591475 MLST8Q9BVC4 326 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 ZNF492Q9P255 531 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 RPH3ALQ9UNE2 315 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 COX11Q9Y6N1 276 aa8.7□□□□□ -1.02
VPS4B-206ENST00000591475 CADP27708 2225 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 IGLC7A0M8Q6 106 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 TOMM40O96008 361 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 P01737 135 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 NBEAP1P0C6P0 100 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 CD40P25942 277 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 UQCRFS1P47985 274 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 CCL8P80075 99 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 UNQ5815/PRO19632Q6UWF5 114 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 MUC15Q8N387 334 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 LINC00311Q8N616 119 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 C8orf31Q8N9H6 132 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 C5orf17Q8NAS9 161 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 C22orf15Q8WYQ4 148 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 RNASE6Q93091 150 aaKnown RBP8.69□□□□□ -1.02
VPS4B-206ENST00000591475 URB1-AS1Q96HZ7 61 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 SGK494Q96LW2 274 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 PRSS22Q9GZN4 317 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 CLEC5AQ9NY25 188 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 C1RLQ9NZP8 487 aa8.69□□□□□ -1.02
VPS4B-206ENST00000591475 A0A1W2PPI3 338 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 FAM90A27PA6NNH2 459 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 C22orf46C9J442 243 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 CCL25O15444 150 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 TMEM108Q6UXF1 575 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 C22orf34Q6ZV56 151 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 KIR3DL3Q8N743 410 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 NUP37Q8NFH4 326 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 OR4F17Q8NGA8 305 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 H1FXQ92522 213 aaKnown RBP8.68□□□□□ -1.02
VPS4B-206ENST00000591475 TRGV9Q99603 122 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 GFRA4Q9GZZ7 299 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 NGBQ9NPG2 151 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 C19orf71A6NCJ1 209 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 OR4C46A6NHA9 309 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 CRXO43186 299 aaPredicted RBP8.68□□□□□ -1.02
VPS4B-206ENST00000591475 SLC25A17O43808 307 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 LTAP01374 205 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 CRYGCP07315 174 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 MC5RP33032 325 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 UBE2V1Q13404 147 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 DIAPH2-AS1Q14236 149 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 FAM120AOSQ5T036 256 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 LEMD1Q68G75 181 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 SPATA12Q7Z6I5 190 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 ZNF843Q8N446 348 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 DAZAP1Q96EP5 407 aaKnown RBP8.68□□□□□ -1.02
VPS4B-206ENST00000591475 PGLYRP4Q96LB8 373 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 ST20Q9HBF5 79 aa8.68□□□□□ -1.02
VPS4B-206ENST00000591475 IGHV1-24A0A0C4DH33 117 aa8.67□□□□□ -1.02
VPS4B-206ENST00000591475 PRB1P04280 392 aa8.67□□□□□ -1.02
VPS4B-206ENST00000591475 FOXA3P55318 350 aaPredicted RBP8.67□□□□□ -1.02
VPS4B-206ENST00000591475 LINC00322Q6ZN03 302 aaPredicted RBP8.67□□□□□ -1.02
VPS4B-206ENST00000591475 RBPMS2Q6ZRY4 209 aaKnown RBP8.67□□□□□ -1.02
VPS4B-206ENST00000591475 GTSF1Q8WW33 167 aa8.67□□□□□ -1.02
VPS4B-206ENST00000591475 ST6GALNAC6Q969X2 333 aa8.67□□□□□ -1.02
VPS4B-206ENST00000591475 PPIAL4EA0A075B759 164 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 SH2D7A6NKC9 451 aaPredicted RBP8.66□□□□□ -1.02
VPS4B-206ENST00000591475 C17orf100A8MU93 164 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 PPIAL4DF5H284 164 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 SYS1-DBNDD2H3BUS1 97 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 NDUFB3O43676 98 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 LEPROTL1O95214 131 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 TCRAP04437 139 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 THBDP07204 575 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 PPIAL4FP0DN26 164 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 GP9P14770 177 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 LGALS7P47929 136 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 PVRIGQ6DKI7 326 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 Q9H3A6 140 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 TPSG1Q9NRR2 321 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 NAV3Q8IVL0 2385 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 FAM231BA6NCW3 169 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 CHEK1O14757 476 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 FCN3O75636 299 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 ZNF137PP52743 207 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 CDSNQ15517 529 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 LRRC10Q5BKY1 277 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 HCP5Q6MZN7 132 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 Q6ZVH6 145 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 WFDC8Q8IUA0 241 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 TMEM191AQ9H0A3 160 aa8.66□□□□□ -1.02
VPS4B-206ENST00000591475 HIVEP3Q5T1R4 2406 aa8.65□□□□□ -1.02
VPS4B-206ENST00000591475 LOC102724200A0A096LPH7 203 aaPredicted RBP8.65□□□□□ -1.02
VPS4B-206ENST00000591475 M0QZ24 198 aa8.65□□□□□ -1.02
VPS4B-206ENST00000591475 ENSAO43768 121 aaKnown RBP8.65□□□□□ -1.02
VPS4B-206ENST00000591475 OR5AL1P0C617 328 aa8.65□□□□□ -1.02
VPS4B-206ENST00000591475 PLP1P60201 277 aa8.65□□□□□ -1.02
VPS4B-206ENST00000591475 MRGPRG-AS1Q2M3A8 158 aa8.65□□□□□ -1.02
VPS4B-206ENST00000591475 PRR31Q5SQ13 230 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms