RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 IGKV1OR2-108A0A075B7D4 117 aa12.95□□□□□ -0.34
H3F3B-209ENST00000589949 C11orf94C9JXX5 98 aa12.95□□□□□ -0.34
H3F3B-209ENST00000589949 PRAF2O60831 178 aa12.95□□□□□ -0.34
H3F3B-209ENST00000589949 TCTAP57738 103 aa12.95□□□□□ -0.34
H3F3B-209ENST00000589949 SNRPD3P62318 126 aaKnown RBP12.95□□□□□ -0.34
H3F3B-209ENST00000589949 OR1S1Q8NH92 325 aa12.95□□□□□ -0.34
H3F3B-209ENST00000589949 SEPSECSQ9HD40 501 aaKnown RBP12.95□□□□□ -0.34
H3F3B-209ENST00000589949 CACFD1Q9UGQ2 172 aa12.95□□□□□ -0.34
H3F3B-209ENST00000589949 DNAH6Q9C0G6 4158 aa12.94□□□□□ -0.34
H3F3B-209ENST00000589949 SOCS3O14543 225 aa12.94□□□□□ -0.34
H3F3B-209ENST00000589949 IAPPP10997 89 aa12.94□□□□□ -0.34
H3F3B-209ENST00000589949 HLA-DRB4P13762 266 aa12.94□□□□□ -0.34
H3F3B-209ENST00000589949 GPX4P36969 197 aaPredicted RBP12.94□□□□□ -0.34
H3F3B-209ENST00000589949 BCAP31P51572 246 aa12.94□□□□□ -0.34
H3F3B-209ENST00000589949 FXYD7P58549 80 aa12.94□□□□□ -0.34
H3F3B-209ENST00000589949 OR2F1Q13607 317 aa12.94□□□□□ -0.34
H3F3B-209ENST00000589949 TMED4Q7Z7H5 227 aa12.94□□□□□ -0.34
H3F3B-209ENST00000589949 KRTAP17-1Q9BYP8 105 aa12.94□□□□□ -0.34
H3F3B-209ENST00000589949 HLA-DRB4X5D2U9 266 aa12.94□□□□□ -0.34
H3F3B-209ENST00000589949 IGHV4-4A0A075B6R2 117 aa12.93□□□□□ -0.34
H3F3B-209ENST00000589949 TRAV10A0A0B4J240 114 aa12.93□□□□□ -0.34
H3F3B-209ENST00000589949 ZFP92A6NM28 416 aa12.93□□□□□ -0.34
H3F3B-209ENST00000589949 IGKV3-20P01619 116 aa12.93□□□□□ -0.34
H3F3B-209ENST00000589949 IL5P05113 134 aa12.93□□□□□ -0.34
H3F3B-209ENST00000589949 NKX2-1P43699 371 aaPredicted RBP12.93□□□□□ -0.34
H3F3B-209ENST00000589949 C17orf77Q96MU5 243 aa12.93□□□□□ -0.34
H3F3B-209ENST00000589949 ALG5Q9Y673 324 aa12.93□□□□□ -0.34
H3F3B-209ENST00000589949 HERC2O95714 4834 aa12.93□□□□□ -0.34
H3F3B-209ENST00000589949 C7orf66A4D0T2 115 aa12.92□□□□□ -0.34
H3F3B-209ENST00000589949 LYZP61626 148 aa12.92□□□□□ -0.34
H3F3B-209ENST00000589949 SRPXP78539 464 aa12.92□□□□□ -0.34
H3F3B-209ENST00000589949 TMEM128Q5BJH2 165 aa12.92□□□□□ -0.34
H3F3B-209ENST00000589949 OR8G2PQ6IF36 304 aa12.92□□□□□ -0.34
H3F3B-209ENST00000589949 ZNF705AQ6ZN79 300 aaPredicted RBP12.92□□□□□ -0.34
H3F3B-209ENST00000589949 ZNF705FA8MVS1 300 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-209ENST00000589949 PRSS46E5RG02 174 aa12.91□□□□□ -0.34
H3F3B-209ENST00000589949 ZNF705DP0CH99 300 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-209ENST00000589949 ZNF705BP0CI00 300 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-209ENST00000589949 ANXA3P12429 323 aa12.91□□□□□ -0.34
H3F3B-209ENST00000589949 ANXA7P20073 488 aaKnown RBP12.91□□□□□ -0.34
H3F3B-209ENST00000589949 ATP5IP56385 69 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-209ENST00000589949 LRTM2Q8N967 370 aa12.91□□□□□ -0.34
H3F3B-209ENST00000589949 ZNF709Q8N972 641 aa12.91□□□□□ -0.34
H3F3B-209ENST00000589949 CHAC2Q8WUX2 184 aa12.91□□□□□ -0.34
H3F3B-209ENST00000589949 SLC35E1Q96K37 410 aa12.91□□□□□ -0.34
H3F3B-209ENST00000589949 LINC00052Q96N35 136 aa12.91□□□□□ -0.34
H3F3B-209ENST00000589949 GPN1Q9HCN4 374 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-209ENST00000589949 HECTD4Q9Y4D8 3996 aa12.91□□□□□ -0.34
H3F3B-209ENST00000589949 F6UB75 175 aa12.9□□□□□ -0.34
H3F3B-209ENST00000589949 UBE2MP61081 183 aaKnown RBP12.9□□□□□ -0.34
H3F3B-209ENST00000589949 PPP1R1AQ13522 171 aa12.9□□□□□ -0.34
H3F3B-209ENST00000589949 TMEM182Q6ZP80 229 aaPredicted RBP12.9□□□□□ -0.34
H3F3B-209ENST00000589949 C20orf173Q96LM9 149 aa12.9□□□□□ -0.34
H3F3B-209ENST00000589949 TRGV9Q99603 122 aa12.9□□□□□ -0.34
H3F3B-209ENST00000589949 RNF126Q9BV68 326 aa12.9□□□□□ -0.34
H3F3B-209ENST00000589949 C1QTNF4Q9BXJ3 329 aa12.9□□□□□ -0.34
H3F3B-209ENST00000589949 MAGT1Q9H0U3 335 aa12.9□□□□□ -0.34
H3F3B-209ENST00000589949 SAV1Q9H4B6 383 aaPredicted RBP12.9□□□□□ -0.34
H3F3B-209ENST00000589949 DEFB131BA0A096LNP1 70 aa12.89□□□□□ -0.35
H3F3B-209ENST00000589949 DUXBA0A1W2PPF3 345 aa12.89□□□□□ -0.35
H3F3B-209ENST00000589949 SNRPGP15A8MWD9 76 aa12.89□□□□□ -0.35
H3F3B-209ENST00000589949 OR4E1P0C645 316 aa12.89□□□□□ -0.35
H3F3B-209ENST00000589949 VAMP1P23763 118 aa12.89□□□□□ -0.35
H3F3B-209ENST00000589949 NUTF2P61970 127 aaKnown RBP12.89□□□□□ -0.35
H3F3B-209ENST00000589949 C1orf194Q5T5A4 169 aa12.89□□□□□ -0.35
H3F3B-209ENST00000589949 THAP8Q8NA92 274 aa12.89□□□□□ -0.35
H3F3B-209ENST00000589949 SLC35B3Q9H1N7 401 aa12.89□□□□□ -0.35
H3F3B-209ENST00000589949 SFT2D2O95562 160 aa12.88□□□□□ -0.35
H3F3B-209ENST00000589949 SLC25A6P12236 298 aa12.88□□□□□ -0.35
H3F3B-209ENST00000589949 GATA2P23769 480 aaPredicted RBP12.88□□□□□ -0.35
H3F3B-209ENST00000589949 PSMB3P49720 205 aa12.88□□□□□ -0.35
H3F3B-209ENST00000589949 FOXI2Q6ZQN5 318 aa12.88□□□□□ -0.35
H3F3B-209ENST00000589949 NEU1Q99519 415 aa12.88□□□□□ -0.35
H3F3B-209ENST00000589949 SEC22CQ9BRL7 303 aa12.88□□□□□ -0.35
H3F3B-209ENST00000589949 PLA2G2EQ9NZK7 142 aa12.88□□□□□ -0.35
H3F3B-209ENST00000589949 PAIP2BQ9ULR5 123 aaKnown RBP12.88□□□□□ -0.35
H3F3B-209ENST00000589949 WRBO00258 174 aa12.87□□□□□ -0.35
H3F3B-209ENST00000589949 PFDN1O60925 122 aa12.87□□□□□ -0.35
H3F3B-209ENST00000589949 AMBPP02760 352 aa12.87□□□□□ -0.35
H3F3B-209ENST00000589949 NUP62P37198 522 aaPredicted RBP12.87□□□□□ -0.35
H3F3B-209ENST00000589949 EMP1P54849 157 aa12.87□□□□□ -0.35
H3F3B-209ENST00000589949 C4orf46Q504U0 113 aa12.87□□□□□ -0.35
H3F3B-209ENST00000589949 ZNF431Q8TF32 576 aaPredicted RBP12.87□□□□□ -0.35
H3F3B-209ENST00000589949 CLUHP3Q96NS8 147 aa12.87□□□□□ -0.35
H3F3B-209ENST00000589949 SLC25A32Q9H2D1 315 aa12.87□□□□□ -0.35
H3F3B-209ENST00000589949 IGHV3OR16-12A0A075B7B8 117 aa12.86□□□□□ -0.35
H3F3B-209ENST00000589949 SYNGR2O43760 224 aa12.86□□□□□ -0.35
H3F3B-209ENST00000589949 HOXB5P09067 269 aa12.86□□□□□ -0.35
H3F3B-209ENST00000589949 RRAS2P62070 204 aaPredicted RBP12.86□□□□□ -0.35
H3F3B-209ENST00000589949 RAB11AP62491 216 aa12.86□□□□□ -0.35
H3F3B-209ENST00000589949 OR8I2Q8N0Y5 310 aa12.86□□□□□ -0.35
H3F3B-209ENST00000589949 C1orf158Q8N1D5 194 aa12.86□□□□□ -0.35
H3F3B-209ENST00000589949 OR4B1Q8NGF8 309 aa12.86□□□□□ -0.35
H3F3B-209ENST00000589949 MED28Q9H204 178 aa12.86□□□□□ -0.35
H3F3B-209ENST00000589949 TMED3Q9Y3Q3 217 aa12.86□□□□□ -0.35
H3F3B-209ENST00000589949 KIAA1109Q2LD37 5005 aa12.85□□□□□ -0.35
H3F3B-209ENST00000589949 A0A0J9YX75 114 aa12.85□□□□□ -0.35
H3F3B-209ENST00000589949 ID1P41134 155 aa12.85□□□□□ -0.35
H3F3B-209ENST00000589949 PAX9P55771 341 aa12.85□□□□□ -0.35
H3F3B-209ENST00000589949 FAM78BQ5VT40 261 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms