RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 C11orf42Q8N5U0 333 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 TCTEX1D1Q8N7M0 179 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 OR51G1Q8NGK1 321 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 OR1P1Q8NH06 330 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 SCGB1C1Q8TD33 95 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 LRRC29Q8WV35 223 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 TMEM170AQ8WVE7 144 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 RSG1Q9BU20 258 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 MAP1LC3BQ9GZQ8 125 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 OR51I2Q9H344 312 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 VSIRQ9H7M9 311 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 MANBALQ9NQG1 85 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 TUBG2Q9NRH3 451 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 PSENENQ9NZ42 101 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 IL36RNQ9UBH0 155 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 HSPB7Q9UBY9 170 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 CACNG5Q9UF02 275 aa5.92□□□□□ -1.46
SMAD4-209ENST00000589941 GCGP01275 180 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 IGKV1D-33P01593 117 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 IGKV1-33P01594 117 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 MBP02144 154 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 AMBPP02760 352 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 PGA5P0DJD9 388 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 GP9P14770 177 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 FGF7P21781 194 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 RPL23P62829 140 aaKnown RBP5.91□□□□□ -1.46
SMAD4-209ENST00000589941 GNG3P63215 75 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 MEF2BQ02080 365 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-209ENST00000589941 TMEM267Q0VDI3 215 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-209ENST00000589941 TMEM241Q24JQ0 296 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 MRPL21Q7Z2W9 205 aaKnown RBP5.91□□□□□ -1.46
SMAD4-209ENST00000589941 C5orf24Q7Z6I8 188 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 C11orf53Q8IXP5 236 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 Q8IYB0 196 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 FAM58AQ8N1B3 248 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 OR10J5Q8NHC4 309 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 BTF3L4Q96K17 158 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 PACRGQ96M98 296 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-209ENST00000589941 OR4C12Q96R67 309 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 IMMP2LQ96T52 175 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 TMEM147Q9BVK8 224 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 SLC25A10Q9UBX3 287 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-209ENST00000589941 LINC00527Q9UJ94 153 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 URGCP-MRPS24S4R325 110 aa5.91□□□□□ -1.46
SMAD4-209ENST00000589941 MYCBP2O75592 4640 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 SMCO3A2RU48 225 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 GAGE12JA6NER3 117 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 A8MWP6 167 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 TSTD3H0UI37 97 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 SLC31A2O15432 143 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 ZNF737O75373 536 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 HRASP01112 189 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 GZMBP10144 247 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 FABP4P15090 132 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 CCL3L1P16619 93 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 GPM6AP51674 278 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 TAS2R60P59551 318 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 RAB4BP61018 213 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 PAX5Q02548 391 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 TNFRSF9Q07011 255 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 SLC38A11Q08AI6 406 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 ZNF146Q15072 292 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 BSXQ3C1V8 233 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 ACOT6Q3I5F7 207 aaPredicted RBP5.9□□□□□ -1.46
SMAD4-209ENST00000589941 LRRC10Q5BKY1 277 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 ACTL10Q5JWF8 245 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 LCN15Q6UWW0 184 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 C16orf82Q7Z2V1 217 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 TMEM144Q7Z5S9 345 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 MRPL52Q86TS9 123 aaKnown RBP5.9□□□□□ -1.46
SMAD4-209ENST00000589941 NDUFAF3Q9BU61 184 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 RBKSQ9H477 322 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 HES4Q9HCC6 221 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 HILPDAQ9Y5L2 63 aa5.9□□□□□ -1.46
SMAD4-209ENST00000589941 LRP1BQ9NZR2 4599 aa5.9□□□□□ -1.47
SMAD4-209ENST00000589941 ZFP92A6NM28 416 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 ANKRD30BLA7E2S9 258 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 CEBPZOSA8MTT3 80 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 PPP5D1E7EU14 171 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 H3BP45 60 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 SLC33A1O00400 549 aaPredicted RBP5.89□□□□□ -1.47
SMAD4-209ENST00000589941 RAB29O14966 203 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 RHBDL1O75783 438 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 BRI3O95415 125 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 METTL15P1P0C7V9 234 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 GZMHP20718 246 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 NANOS2P60321 138 aaKnown RBP5.89□□□□□ -1.47
SMAD4-209ENST00000589941 Q3ZCU0 254 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 WDR82Q6UXN9 313 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 DRAM1Q8N682 238 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 OR51H1Q8NH63 302 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 SMIM7Q9BQ49 75 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 TXNDC17Q9BRA2 123 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 SLC25A33Q9BSK2 321 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 PARLQ9H300 379 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 KCNIP1Q9NZI2 227 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 OR6C3Q9NZP0 311 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 OR1A1Q9P1Q5 309 aa5.89□□□□□ -1.47
SMAD4-209ENST00000589941 TRAV9-1A0A075B6T8 112 aa5.88□□□□□ -1.47
SMAD4-209ENST00000589941 A0A087X0M5 115 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms