RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 KHDC3LQ587J8 217 aa13.46□□□□□ -0.25
CXXC1-212ENST00000589940 UBE2E2Q96LR5 201 aa13.46□□□□□ -0.25
CXXC1-212ENST00000589940 TOMM20LQ6UXN7 152 aa13.45□□□□□ -0.26
CXXC1-212ENST00000589940 WIPF2Q8TF74 440 aaPredicted RBP13.45□□□□□ -0.26
CXXC1-212ENST00000589940 TMPRSS5Q9H3S3 457 aa13.45□□□□□ -0.26
CXXC1-212ENST00000589940 PMS2P11Q13670 270 aa13.45□□□□□ -0.26
CXXC1-212ENST00000589940 IQCF2Q8IXL9 164 aa13.45□□□□□ -0.26
CXXC1-212ENST00000589940 ZFAND3Q9H8U3 227 aa13.45□□□□□ -0.26
CXXC1-212ENST00000589940 PEF1Q9UBV8 284 aaKnown RBP13.45□□□□□ -0.26
CXXC1-212ENST00000589940 TMA7Q9Y2S6 64 aaKnown RBP13.45□□□□□ -0.26
CXXC1-212ENST00000589940 SETD2Q9BYW2 2564 aaPredicted RBP13.45□□□□□ -0.26
CXXC1-212ENST00000589940 TRAV5A0A0B4J249 113 aa13.44□□□□□ -0.26
CXXC1-212ENST00000589940 GUK1Q16774 197 aa13.44□□□□□ -0.26
CXXC1-212ENST00000589940 UQCC3Q6UW78 93 aa13.44□□□□□ -0.26
CXXC1-212ENST00000589940 PQLC2Q6ZP29 291 aa13.44□□□□□ -0.26
CXXC1-212ENST00000589940 FAM167A-AS1Q96KT0 104 aa13.44□□□□□ -0.26
CXXC1-212ENST00000589940 OR5B12Q96R08 314 aa13.44□□□□□ -0.26
CXXC1-212ENST00000589940 SLC25A2Q9BXI2 301 aa13.44□□□□□ -0.26
CXXC1-212ENST00000589940 SLC25A39Q9BZJ4 359 aaPredicted RBP13.44□□□□□ -0.26
CXXC1-212ENST00000589940 GNG13Q9P2W3 67 aa13.44□□□□□ -0.26
CXXC1-212ENST00000589940 BMPR1BO00238 502 aa13.44□□□□□ -0.26
CXXC1-212ENST00000589940 PSMB3P49720 205 aa13.44□□□□□ -0.26
CXXC1-212ENST00000589940 TOR2AQ5JU69 321 aa13.44□□□□□ -0.26
CXXC1-212ENST00000589940 S100A7AQ86SG5 101 aa13.44□□□□□ -0.26
CXXC1-212ENST00000589940 SCRT1Q9BWW7 348 aa13.44□□□□□ -0.26
CXXC1-212ENST00000589940 OR7C2O60412 319 aa13.43□□□□□ -0.26
CXXC1-212ENST00000589940 LGALS1P09382 135 aaKnown RBP13.43□□□□□ -0.26
CXXC1-212ENST00000589940 GCHFRP30047 84 aa13.43□□□□□ -0.26
CXXC1-212ENST00000589940 SRSF3P84103 164 aaKnown RBP13.43□□□□□ -0.26
CXXC1-212ENST00000589940 TCTEX1D4Q5JR98 221 aa13.43□□□□□ -0.26
CXXC1-212ENST00000589940 OR4F5Q8NH21 305 aa13.43□□□□□ -0.26
CXXC1-212ENST00000589940 SHANK2-AS3Q9BTD1 123 aa13.43□□□□□ -0.26
CXXC1-212ENST00000589940 EIF5A2Q9GZV4 153 aaKnown RBP13.43□□□□□ -0.26
CXXC1-212ENST00000589940 RBFOX3A6NFN3 312 aa13.43□□□□□ -0.26
CXXC1-212ENST00000589940 GGCTO75223 188 aaKnown RBP13.43□□□□□ -0.26
CXXC1-212ENST00000589940 IFNA1P01562 189 aa13.43□□□□□ -0.26
CXXC1-212ENST00000589940 HAGHQ16775 308 aa13.43□□□□□ -0.26
CXXC1-212ENST00000589940 ZNF503Q96F45 646 aa13.43□□□□□ -0.26
CXXC1-212ENST00000589940 RABAC1Q9UI14 185 aa13.43□□□□□ -0.26
CXXC1-212ENST00000589940 H3BRN7 92 aa13.42□□□□□ -0.26
CXXC1-212ENST00000589940 NDUFA4O00483 81 aa13.42□□□□□ -0.26
CXXC1-212ENST00000589940 PPT1P50897 306 aa13.42□□□□□ -0.26
CXXC1-212ENST00000589940 STXBP6Q8NFX7 210 aa13.42□□□□□ -0.26
CXXC1-212ENST00000589940 IGHV3OR16-8A0A075B7F1 116 aa13.41□□□□□ -0.26
CXXC1-212ENST00000589940 CD5P06127 495 aa13.41□□□□□ -0.26
CXXC1-212ENST00000589940 BCL2P10415 239 aa13.41□□□□□ -0.26
CXXC1-212ENST00000589940 CDX1P47902 265 aaPredicted RBP13.41□□□□□ -0.26
CXXC1-212ENST00000589940 LEMD1Q68G75 181 aa13.41□□□□□ -0.26
CXXC1-212ENST00000589940 RARRES2Q99969 163 aa13.41□□□□□ -0.26
CXXC1-212ENST00000589940 TMEM231Q9H6L2 316 aa13.41□□□□□ -0.26
CXXC1-212ENST00000589940 MANBALQ9NQG1 85 aa13.41□□□□□ -0.26
CXXC1-212ENST00000589940 C2CD3Q4AC94 2353 aa13.41□□□□□ -0.26
CXXC1-212ENST00000589940 SRSF2Q01130 221 aaKnown RBP13.41□□□□□ -0.26
CXXC1-212ENST00000589940 TMEM167BQ9NRX6 74 aa13.41□□□□□ -0.26
CXXC1-212ENST00000589940 TEP1Q99973 2627 aaKnown RBP13.41□□□□□ -0.26
CXXC1-212ENST00000589940 LOC102723971A0A1B0GUV8 181 aa13.4□□□□□ -0.26
CXXC1-212ENST00000589940 S100A7P31151 101 aa13.4□□□□□ -0.26
CXXC1-212ENST00000589940 PEA15Q15121 130 aa13.4□□□□□ -0.26
CXXC1-212ENST00000589940 ZNF506Q5JVG8 444 aa13.4□□□□□ -0.26
CXXC1-212ENST00000589940 PAXXQ9BUH6 204 aa13.4□□□□□ -0.26
CXXC1-212ENST00000589940 OR51M1Q9H341 326 aa13.4□□□□□ -0.26
CXXC1-212ENST00000589940 CLPSL1A2RUU4 121 aa13.4□□□□□ -0.26
CXXC1-212ENST00000589940 ZNF98A6NK75 572 aa13.4□□□□□ -0.26
CXXC1-212ENST00000589940 I3L521 148 aa13.4□□□□□ -0.26
CXXC1-212ENST00000589940 TREM1Q9NP99 234 aa13.4□□□□□ -0.26
CXXC1-212ENST00000589940 RNF114Q9Y508 228 aa13.4□□□□□ -0.26
CXXC1-212ENST00000589940 OR10J4P0C629 311 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 PYYP10082 97 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 TAGLN2P37802 199 aaKnown RBP13.39□□□□□ -0.27
CXXC1-212ENST00000589940 UBE2L3P68036 154 aaKnown RBP13.39□□□□□ -0.27
CXXC1-212ENST00000589940 ICAM4Q14773 271 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 SUN5Q8TC36 379 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 C20orf24Q9BUV8 137 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 SMDT1Q9H4I9 107 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 GP9P14770 177 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 KHDC1LQ5JSQ8 128 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 UNQ9165/PRO28630Q6UXU0 137 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 C4orf3Q8WVX3 66 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 WFDC12Q8WWY7 111 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 METTL26Q96S19 204 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 VAX2Q9UIW0 290 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 RNF24Q9Y225 148 aa13.39□□□□□ -0.27
CXXC1-212ENST00000589940 JMJD1CQ15652 2540 aa13.38□□□□□ -0.27
CXXC1-212ENST00000589940 HAX1O00165 279 aa13.38□□□□□ -0.27
CXXC1-212ENST00000589940 PAGE4O60829 102 aa13.38□□□□□ -0.27
CXXC1-212ENST00000589940 PROK1P58294 105 aa13.38□□□□□ -0.27
CXXC1-212ENST00000589940 RXFP4Q8TDU9 374 aa13.38□□□□□ -0.27
CXXC1-212ENST00000589940 TMEM190Q8WZ59 177 aa13.38□□□□□ -0.27
CXXC1-212ENST00000589940 NARS2Q96I59 477 aaKnown RBP13.38□□□□□ -0.27
CXXC1-212ENST00000589940 TMEM14CQ9P0S9 112 aa13.38□□□□□ -0.27
CXXC1-212ENST00000589940 C9JQL5 133 aa13.37□□□□□ -0.27
CXXC1-212ENST00000589940 UBE2G2P60604 165 aa13.37□□□□□ -0.27
CXXC1-212ENST00000589940 RPEL1Q2QD12 228 aa13.37□□□□□ -0.27
CXXC1-212ENST00000589940 GPHB5Q86YW7 130 aa13.37□□□□□ -0.27
CXXC1-212ENST00000589940 FXYD5Q96DB9 178 aa13.37□□□□□ -0.27
CXXC1-212ENST00000589940 HSPB1P04792 205 aaKnown RBP13.37□□□□□ -0.27
CXXC1-212ENST00000589940 CD28P10747 220 aa13.37□□□□□ -0.27
CXXC1-212ENST00000589940 NPPCP23582 126 aa13.37□□□□□ -0.27
CXXC1-212ENST00000589940 CRYBB3P26998 211 aa13.37□□□□□ -0.27
CXXC1-212ENST00000589940 MEF2BQ02080 365 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms