RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	PLEC	Q15149	4684 aa	Known RBP	12.7	□□□□□ -0.38
MBD1-221	ENST00000589867	SMCO3	A2RU48	225 aa		12.69	□□□□□ -0.38
MBD1-221	ENST00000589867	KNCN	A6PVL3	124 aa		12.69	□□□□□ -0.38
MBD1-221	ENST00000589867	C3orf84	H3BNL1	204 aa		12.69	□□□□□ -0.38
MBD1-221	ENST00000589867	UBE2C	O00762	179 aa		12.69	□□□□□ -0.38
MBD1-221	ENST00000589867	DEDD	O75618	318 aa		12.69	□□□□□ -0.38
MBD1-221	ENST00000589867	FABP1	P07148	127 aa		12.69	□□□□□ -0.38
MBD1-221	ENST00000589867	AP2S1	P53680	142 aa	Predicted RBP	12.69	□□□□□ -0.38
MBD1-221	ENST00000589867	CASC10	Q5T4H9	136 aa		12.69	□□□□□ -0.38
MBD1-221	ENST00000589867	C1orf194	Q5T5A4	169 aa		12.69	□□□□□ -0.38
MBD1-221	ENST00000589867	OR10P1	Q8NGE3	313 aa		12.69	□□□□□ -0.38
MBD1-221	ENST00000589867	RNF183	Q96D59	192 aa		12.69	□□□□□ -0.38
MBD1-221	ENST00000589867	NRN1	Q9NPD7	142 aa		12.69	□□□□□ -0.38
MBD1-221	ENST00000589867	TP53TG1	Q9Y2A0	90 aa		12.69	□□□□□ -0.38
MBD1-221	ENST00000589867	PLP1	P60201	277 aa		12.68	□□□□□ -0.38
MBD1-221	ENST00000589867	TRPT1	Q86TN4	253 aa	Known RBP	12.68	□□□□□ -0.38
MBD1-221	ENST00000589867	BPIFC	Q8NFQ6	507 aa		12.68	□□□□□ -0.38
MBD1-221	ENST00000589867	CSTL1	Q9H114	145 aa		12.68	□□□□□ -0.38
MBD1-221	ENST00000589867	SLC25A32	Q9H2D1	315 aa		12.68	□□□□□ -0.38
MBD1-221	ENST00000589867	NPVF	Q9HCQ7	196 aa		12.68	□□□□□ -0.38
MBD1-221	ENST00000589867	SLC45A2	Q9UMX9	530 aa		12.68	□□□□□ -0.38
MBD1-221	ENST00000589867	IGSF23	A1L1A6	192 aa		12.67	□□□□□ -0.38
MBD1-221	ENST00000589867	ZNF98	A6NK75	572 aa		12.67	□□□□□ -0.38
MBD1-221	ENST00000589867		H0YIZ8	118 aa		12.67	□□□□□ -0.38
MBD1-221	ENST00000589867	SPRY2	O43597	315 aa		12.67	□□□□□ -0.38
MBD1-221	ENST00000589867	PRAF2	O60831	178 aa		12.67	□□□□□ -0.38
MBD1-221	ENST00000589867	CFD	P00746	253 aa	Predicted RBP	12.67	□□□□□ -0.38
MBD1-221	ENST00000589867	DEFB1	P60022	68 aa		12.67	□□□□□ -0.38
MBD1-221	ENST00000589867	EWSR1	Q01844	656 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
MBD1-221	ENST00000589867	SLC38A11	Q08AI6	406 aa		12.67	□□□□□ -0.38
MBD1-221	ENST00000589867	PATE2	Q6UY27	113 aa		12.67	□□□□□ -0.38
MBD1-221	ENST00000589867	GGACT	Q9BVM4	153 aa		12.67	□□□□□ -0.38
MBD1-221	ENST00000589867	GPN1	Q9HCN4	374 aa	Predicted RBP	12.67	□□□□□ -0.38
MBD1-221	ENST00000589867	SEPSECS	Q9HD40	501 aa	Known RBP	12.67	□□□□□ -0.38
MBD1-221	ENST00000589867		H3BRN7	92 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867		L7N2F9	121 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	GOSR2	O14653	212 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	CST7	O76096	145 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	ORM2	P19652	201 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	NUP62	P37198	522 aa	Predicted RBP	12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	H2BFS	P57053	126 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	S100A10	P60903	97 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	VAMP2	P63027	116 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	PSMG4	Q5JS54	123 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	TMEM252	Q8N6L7	170 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	MGST2	Q99735	147 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	SCRT1	Q9BWW7	348 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	LYRM2	Q9NU23	88 aa	Predicted RBP	12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	DOK5	Q9P104	306 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	DNAH1	Q9P2D7	4330 aa		12.66	□□□□□ -0.38
MBD1-221	ENST00000589867	CAV2	P51636	162 aa		12.65	□□□□□ -0.38
MBD1-221	ENST00000589867	DEFA1	P59665	94 aa		12.65	□□□□□ -0.38
MBD1-221	ENST00000589867	DEFA3	P59666	94 aa		12.65	□□□□□ -0.38
MBD1-221	ENST00000589867	VWC2	Q2TAL6	325 aa		12.65	□□□□□ -0.38
MBD1-221	ENST00000589867	TEPP	Q6URK8	271 aa		12.65	□□□□□ -0.38
MBD1-221	ENST00000589867	OR1B1	Q8NGR6	318 aa		12.65	□□□□□ -0.38
MBD1-221	ENST00000589867	AGPAT2	O15120	278 aa		12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	LINC00869	P0C866	280 aa		12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	LYL1	P12980	280 aa		12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	C4BPB	P20851	252 aa		12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	BCAP31	P51572	246 aa		12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	ACTL10	Q5JWF8	245 aa		12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	GDF5OS	Q5U4N7	250 aa		12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	ZFAND6	Q6FIF0	208 aa		12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	OR8I2	Q8N0Y5	310 aa		12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	SHANK2-AS3	Q9BTD1	123 aa		12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	NMES1	Q9C002	83 aa		12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	OR5AC2	Q9NZP5	309 aa		12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	MGAT4C	Q9UBM8	478 aa		12.64	□□□□□ -0.39
MBD1-221	ENST00000589867	SELENOT	P62341	195 aa		12.63	□□□□□ -0.39
MBD1-221	ENST00000589867	STH	Q8IWL8	128 aa		12.63	□□□□□ -0.39
MBD1-221	ENST00000589867	TMEM217	Q8N7C4	229 aa		12.63	□□□□□ -0.39
MBD1-221	ENST00000589867	PPP1R14B	Q96C90	147 aa		12.63	□□□□□ -0.39
MBD1-221	ENST00000589867	C20orf173	Q96LM9	149 aa		12.63	□□□□□ -0.39
MBD1-221	ENST00000589867	UHRF2	Q96PU4	802 aa		12.63	□□□□□ -0.39
MBD1-221	ENST00000589867	TMEM147	Q9BVK8	224 aa		12.63	□□□□□ -0.39
MBD1-221	ENST00000589867	SLC25A22	Q9H936	323 aa		12.63	□□□□□ -0.39
MBD1-221	ENST00000589867	FBXL17	Q9UF56	701 aa		12.63	□□□□□ -0.39
MBD1-221	ENST00000589867	PFDN2	Q9UHV9	154 aa		12.63	□□□□□ -0.39
MBD1-221	ENST00000589867		A0A0J9YWU9	116 aa		12.62	□□□□□ -0.39
MBD1-221	ENST00000589867		H3BMM0	161 aa		12.62	□□□□□ -0.39
MBD1-221	ENST00000589867	MRPS12	O15235	138 aa	Known RBP	12.62	□□□□□ -0.39
MBD1-221	ENST00000589867	HYPM	O75409	117 aa		12.62	□□□□□ -0.39
MBD1-221	ENST00000589867	CA1	P00915	261 aa	Predicted RBP	12.62	□□□□□ -0.39
MBD1-221	ENST00000589867	SULT1A1	P50225	295 aa		12.62	□□□□□ -0.39
MBD1-221	ENST00000589867	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		12.62	□□□□□ -0.39
MBD1-221	ENST00000589867	RNF126	Q9BV68	326 aa		12.62	□□□□□ -0.39
MBD1-221	ENST00000589867	WDR83OS	Q9Y284	106 aa		12.62	□□□□□ -0.39
MBD1-221	ENST00000589867	TRAV8-2	A0A0B4J237	113 aa		12.61	□□□□□ -0.39
MBD1-221	ENST00000589867	PVALB	P20472	110 aa	Predicted RBP	12.61	□□□□□ -0.39
MBD1-221	ENST00000589867	MORN5	Q5VZ52	161 aa		12.61	□□□□□ -0.39
MBD1-221	ENST00000589867	CSNK1G2-AS1	Q8NCQ2	148 aa		12.61	□□□□□ -0.39
MBD1-221	ENST00000589867	TMEM37	Q8WXS4	190 aa		12.61	□□□□□ -0.39
MBD1-221	ENST00000589867	RSG1	Q9BU20	258 aa		12.61	□□□□□ -0.39
MBD1-221	ENST00000589867	ARL6	Q9H0F7	186 aa		12.61	□□□□□ -0.39
MBD1-221	ENST00000589867	HIGD1A	Q9Y241	93 aa		12.61	□□□□□ -0.39
MBD1-221	ENST00000589867	ALMS1	Q8TCU4	4167 aa		12.61	□□□□□ -0.39
MBD1-221	ENST00000589867	RYR2	Q92736	4967 aa		12.6	□□□□□ -0.39
MBD1-221	ENST00000589867	HLA-DRB4	P13762	266 aa		12.6	□□□□□ -0.39

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