RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 GATCO43716 136 aaKnown RBP8.45□□□□□ -1.06
ZNF540-208ENST00000589857 AMY1AP04745 511 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 SLC25A5P05141 298 aaKnown RBP8.45□□□□□ -1.06
ZNF540-208ENST00000589857 REG1AP05451 166 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 NBEAP1P0C6P0 100 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 HNF1AP20823 631 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 CX3CL1P78423 397 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 TMEM183BQ1AE95 376 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 CLEC12BQ2HXU8 276 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 PDZD11Q5EBL8 140 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 PATE2Q6UY27 113 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 BAGE2Q86Y30 109 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 TMEM158Q8WZ71 300 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 GRAMD2BQ96HH9 432 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 ZNF48Q96MX3 618 aaPredicted RBP8.45□□□□□ -1.06
ZNF540-208ENST00000589857 ATG101Q9BSB4 218 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 ZNF331Q9NQX6 463 aaPredicted RBP8.45□□□□□ -1.06
ZNF540-208ENST00000589857 OTORQ9NRC9 128 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 EPDR1Q9UM22 224 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 AKAP6Q13023 2319 aa8.45□□□□□ -1.06
ZNF540-208ENST00000589857 TRAV5A0A0B4J249 113 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 SMIM27A0A1W2PRY6 76 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 IZUMO1RA6ND01 250 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 ZNF705GA8MUZ8 300 aaPredicted RBP8.44□□□□□ -1.06
ZNF540-208ENST00000589857 INAFM1C9JVW0 142 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 I3L2K1 104 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 K7EQM0 130 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 FCN1O00602 326 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 AMBPP02760 352 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 IGLC1P0CG04 106 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 CRISP2P16562 243 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 EFNA4P52798 201 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 TPPP2P59282 170 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 PKIAP61925 76 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 ARF6P62330 175 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 CTAG1AP78358 180 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 HES1Q14469 280 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 FXYD3Q14802 87 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 USF2Q15853 346 aaPredicted RBP8.44□□□□□ -1.06
ZNF540-208ENST00000589857 IQCJQ1A5X6 159 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 GFI1BQ5VTD9 330 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 LYPD1Q8N2G4 141 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 GBGT1Q8N5D6 347 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 OR4F17Q8NGA8 305 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 IGFBPL1Q8WX77 278 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 CFHR4Q92496 578 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 RITA1Q96K30 269 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 WNT10AQ9GZT5 417 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 MRPL18Q9H0U6 180 aaKnown RBP8.44□□□□□ -1.06
ZNF540-208ENST00000589857 SERTAD4Q9NUC0 356 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 SOX21Q9Y651 276 aaPredicted RBP8.44□□□□□ -1.06
ZNF540-208ENST00000589857 HIVEP2P31629 2446 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 JMJD1CQ15652 2540 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 DSCAMO60469 2012 aa8.44□□□□□ -1.06
ZNF540-208ENST00000589857 TRBV6-1A0A0K0K1D8 114 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 SLC17A3O00476 420 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 CRLF1O75462 422 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 TOMM40O96008 361 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 RD3LP0DJH9 198 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 PYYP10082 97 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 CNTFRP26992 372 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 BRS3P32247 399 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 MYCNOSP40205 109 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 MFAP4P55083 255 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 LYZP61626 148 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 SSBP2P81877 361 aaPredicted RBP8.43□□□□□ -1.06
ZNF540-208ENST00000589857 Q0VG73 95 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 C5orf64Q2M2E5 130 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 CT83Q5H943 113 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 FAM162BQ5T6X4 162 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 ZNF562Q6V9R5 426 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 ATP5L2Q7Z4Y8 100 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 BPIFA4PQ86YQ2 179 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 OR8I2Q8N0Y5 310 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 CMTM2Q8TAZ6 248 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 GPR82Q96P67 336 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 LPAR2Q9HBW0 351 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 ZNF492Q9P255 531 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 NAT8BQ9UHF3 227 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 KLF12Q9Y4X4 402 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 CSPG4Q6UVK1 2322 aa8.43□□□□□ -1.06
ZNF540-208ENST00000589857 SERTM2A0A1B0GWG4 89 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 PGPA6NDG6 321 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 SNURFLB1AK76 121 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 FAM106CPP0CH98 169 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 ESDP10768 282 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 GP9P14770 177 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 ADMP35318 185 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 IER3P46695 156 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 MFAP2P55001 183 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 OR5I1Q13606 314 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 EBI3Q14213 229 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 OR10J3Q5JRS4 329 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 VMO1Q7Z5L0 202 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 WIPF2Q8TF74 440 aaPredicted RBP8.42□□□□□ -1.06
ZNF540-208ENST00000589857 ARPC1AQ92747 370 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 DAZAP1Q96EP5 407 aaKnown RBP8.42□□□□□ -1.06
ZNF540-208ENST00000589857 NOL4LQ96MY1 436 aaPredicted RBP8.42□□□□□ -1.06
ZNF540-208ENST00000589857 TXN2Q99757 166 aa8.42□□□□□ -1.06
ZNF540-208ENST00000589857 DSCAML1Q8TD84 2053 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms