RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 C4BPBP20851 252 aa8.86□□□□□ -0.99
VAT1-206ENST00000589709 VAMP1P23763 118 aa8.86□□□□□ -0.99
VAT1-206ENST00000589709 NUP62P37198 522 aaPredicted RBP8.86□□□□□ -0.99
VAT1-206ENST00000589709 SNRPD3P62318 126 aaKnown RBP8.86□□□□□ -0.99
VAT1-206ENST00000589709 PSMG4Q5JS54 123 aa8.86□□□□□ -0.99
VAT1-206ENST00000589709 RPP25LQ8N5L8 163 aaKnown RBP8.86□□□□□ -0.99
VAT1-206ENST00000589709 RBKSQ9H477 322 aa8.86□□□□□ -0.99
VAT1-206ENST00000589709 NRN1Q9NPD7 142 aa8.86□□□□□ -0.99
VAT1-206ENST00000589709 PRR13Q9NZ81 148 aa8.86□□□□□ -0.99
VAT1-206ENST00000589709 PFDN2Q9UHV9 154 aa8.86□□□□□ -0.99
VAT1-206ENST00000589709 X6R8D5 127 aa8.86□□□□□ -0.99
VAT1-206ENST00000589709 VPS13DQ5THJ4 4388 aa8.86□□□□□ -0.99
VAT1-206ENST00000589709 DNAH10Q8IVF4 4471 aa8.86□□□□□ -0.99
VAT1-206ENST00000589709 DUXBA0A1W2PPF3 345 aa8.85□□□□□ -0.99
VAT1-206ENST00000589709 GIPP09681 153 aaPredicted RBP8.85□□□□□ -0.99
VAT1-206ENST00000589709 RAP2BP61225 183 aa8.85□□□□□ -0.99
VAT1-206ENST00000589709 NUTF2P61970 127 aaKnown RBP8.85□□□□□ -0.99
VAT1-206ENST00000589709 PPP1R1AQ13522 171 aa8.85□□□□□ -0.99
VAT1-206ENST00000589709 FCN2Q15485 313 aa8.85□□□□□ -0.99
VAT1-206ENST00000589709 OR8G2PQ6IF36 304 aa8.85□□□□□ -0.99
VAT1-206ENST00000589709 SIGLEC15Q6ZMC9 328 aa8.85□□□□□ -0.99
VAT1-206ENST00000589709 OR51G1Q8NGK1 321 aa8.85□□□□□ -0.99
VAT1-206ENST00000589709 C1QTNF4Q9BXJ3 329 aa8.85□□□□□ -0.99
VAT1-206ENST00000589709 MGAT4CQ9UBM8 478 aa8.85□□□□□ -0.99
VAT1-206ENST00000589709 H3BMM0 161 aa8.84□□□□□ -0.99
VAT1-206ENST00000589709 PITX3O75364 302 aa8.84□□□□□ -0.99
VAT1-206ENST00000589709 DEDDO75618 318 aa8.84□□□□□ -0.99
VAT1-206ENST00000589709 HLA-DMBP28068 263 aa8.84□□□□□ -0.99
VAT1-206ENST00000589709 CYCSP99999 105 aaKnown RBP8.84□□□□□ -0.99
VAT1-206ENST00000589709 GAMTQ14353 236 aa8.84□□□□□ -0.99
VAT1-206ENST00000589709 LRTM2Q8N967 370 aa8.84□□□□□ -0.99
VAT1-206ENST00000589709 RNF125Q96EQ8 232 aa8.84□□□□□ -0.99
VAT1-206ENST00000589709 ST6GAL2Q96JF0 529 aa8.84□□□□□ -0.99
VAT1-206ENST00000589709 APLNQ9ULZ1 77 aa8.84□□□□□ -0.99
VAT1-206ENST00000589709 IGKV1D-37A0A075B6S9 117 aa8.83□□□□□ -1
VAT1-206ENST00000589709 ELOA3CA0A087WX78 387 aaPredicted RBP8.83□□□□□ -1
VAT1-206ENST00000589709 ZFP92A6NM28 416 aa8.83□□□□□ -1
VAT1-206ENST00000589709 FABP1P07148 127 aa8.83□□□□□ -1
VAT1-206ENST00000589709 SLC25A6P12236 298 aa8.83□□□□□ -1
VAT1-206ENST00000589709 NKX2-1P43699 371 aaPredicted RBP8.83□□□□□ -1
VAT1-206ENST00000589709 ZFP69Q49AA0 526 aa8.83□□□□□ -1
VAT1-206ENST00000589709 C1orf194Q5T5A4 169 aa8.83□□□□□ -1
VAT1-206ENST00000589709 OR11H7Q8NGC8 314 aa8.83□□□□□ -1
VAT1-206ENST00000589709 OR1S1Q8NH92 325 aa8.83□□□□□ -1
VAT1-206ENST00000589709 SLC35E1Q96K37 410 aa8.83□□□□□ -1
VAT1-206ENST00000589709 TRAV10A0A0B4J240 114 aa8.82□□□□□ -1
VAT1-206ENST00000589709 IGLL5B9A064 214 aa8.82□□□□□ -1
VAT1-206ENST00000589709 IFNA21P01568 189 aa8.82□□□□□ -1
VAT1-206ENST00000589709 C1QBP02746 253 aa8.82□□□□□ -1
VAT1-206ENST00000589709 HLA-DRB4P13762 266 aa8.82□□□□□ -1
VAT1-206ENST00000589709 FGL1Q08830 312 aa8.82□□□□□ -1
VAT1-206ENST00000589709 CLUHP3Q96NS8 147 aa8.82□□□□□ -1
VAT1-206ENST00000589709 CLEC5AQ9NY25 188 aa8.82□□□□□ -1
VAT1-206ENST00000589709 HLA-DRB4X5D2U9 266 aa8.82□□□□□ -1
VAT1-206ENST00000589709 GOSR2O14653 212 aa8.81□□□□□ -1
VAT1-206ENST00000589709 MED6O75586 246 aa8.81□□□□□ -1
VAT1-206ENST00000589709 ID1P41134 155 aa8.81□□□□□ -1
VAT1-206ENST00000589709 RAB11AP62491 216 aa8.81□□□□□ -1
VAT1-206ENST00000589709 PRR20EP86478 221 aa8.81□□□□□ -1
VAT1-206ENST00000589709 PRR20CP86479 221 aa8.81□□□□□ -1
VAT1-206ENST00000589709 PRR20DP86480 221 aa8.81□□□□□ -1
VAT1-206ENST00000589709 PRR20BP86481 221 aa8.81□□□□□ -1
VAT1-206ENST00000589709 PRR20AP86496 221 aa8.81□□□□□ -1
VAT1-206ENST00000589709 ZNF90Q03938 601 aa8.81□□□□□ -1
VAT1-206ENST00000589709 GSG1LQ6UXU4 331 aa8.81□□□□□ -1
VAT1-206ENST00000589709 Q6ZTC4 211 aa8.81□□□□□ -1
VAT1-206ENST00000589709 HYLS1Q96M11 299 aa8.81□□□□□ -1
VAT1-206ENST00000589709 NEU1Q99519 415 aa8.81□□□□□ -1
VAT1-206ENST00000589709 TRGV9Q99603 122 aa8.81□□□□□ -1
VAT1-206ENST00000589709 PBDC1Q9BVG4 233 aa8.81□□□□□ -1
VAT1-206ENST00000589709 XCL2Q9UBD3 114 aa8.81□□□□□ -1
VAT1-206ENST00000589709 TMED3Q9Y3Q3 217 aa8.81□□□□□ -1
VAT1-206ENST00000589709 FRAS1Q86XX4 4008 aa8.81□□□□□ -1
VAT1-206ENST00000589709 DNAH6Q9C0G6 4158 aa8.81□□□□□ -1
VAT1-206ENST00000589709 CFDP00746 253 aaPredicted RBP8.8□□□□□ -1
VAT1-206ENST00000589709 CXCL3P19876 107 aa8.8□□□□□ -1
VAT1-206ENST00000589709 PSMB3P49720 205 aa8.8□□□□□ -1
VAT1-206ENST00000589709 SAMD13Q5VXD3 122 aa8.8□□□□□ -1
VAT1-206ENST00000589709 SPATA31B1PQ5VZV4 182 aa8.8□□□□□ -1
VAT1-206ENST00000589709 ZNF705AQ6ZN79 300 aaPredicted RBP8.8□□□□□ -1
VAT1-206ENST00000589709 THAP8Q8NA92 274 aa8.8□□□□□ -1
VAT1-206ENST00000589709 CIB3Q96Q77 187 aaPredicted RBP8.8□□□□□ -1
VAT1-206ENST00000589709 RNF126Q9BV68 326 aa8.8□□□□□ -1
VAT1-206ENST00000589709 IGKV1OR2-108A0A075B7D4 117 aa8.79□□□□□ -1
VAT1-206ENST00000589709 SMIM9A6NGZ8 99 aa8.79□□□□□ -1
VAT1-206ENST00000589709 ZNF705FA8MVS1 300 aaPredicted RBP8.79□□□□□ -1
VAT1-206ENST00000589709 BOLA2-SMG1P6H3BVE0 249 aa8.79□□□□□ -1
VAT1-206ENST00000589709 SOCS3O14543 225 aa8.79□□□□□ -1
VAT1-206ENST00000589709 ZNF705DP0CH99 300 aaPredicted RBP8.79□□□□□ -1
VAT1-206ENST00000589709 ZNF705BP0CI00 300 aaPredicted RBP8.79□□□□□ -1
VAT1-206ENST00000589709 PET100P0DJ07 73 aa8.79□□□□□ -1
VAT1-206ENST00000589709 RPP30P78346 268 aaKnown RBP8.79□□□□□ -1
VAT1-206ENST00000589709 C12orf74Q32Q52 190 aa8.79□□□□□ -1
VAT1-206ENST00000589709 GGNBP1Q5YKI7 109 aa8.79□□□□□ -1
VAT1-206ENST00000589709 FOXI2Q6ZQN5 318 aa8.79□□□□□ -1
VAT1-206ENST00000589709 OR2T35Q8NGX2 323 aa8.79□□□□□ -1
VAT1-206ENST00000589709 NMES1Q9C002 83 aa8.79□□□□□ -1
VAT1-206ENST00000589709 SAV1Q9H4B6 383 aaPredicted RBP8.79□□□□□ -1
VAT1-206ENST00000589709 SLC45A2Q9UMX9 530 aa8.79□□□□□ -1
VAT1-206ENST00000589709 IGHV4-4A0A075B6R2 117 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms