RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 TEPPQ6URK8 271 aa12.16□□□□□ -0.46
DNMT1-221ENST00000589538 Q6ZWC4 215 aa12.16□□□□□ -0.46
DNMT1-221ENST00000589538 STPG3Q8N7X2 389 aa12.16□□□□□ -0.46
DNMT1-221ENST00000589538 NMES1Q9C002 83 aa12.16□□□□□ -0.46
DNMT1-221ENST00000589538 GOSR2O14653 212 aa12.15□□□□□ -0.46
DNMT1-221ENST00000589538 SNRPD3P62318 126 aaKnown RBP12.15□□□□□ -0.46
DNMT1-221ENST00000589538 SAMD13Q5VXD3 122 aa12.15□□□□□ -0.46
DNMT1-221ENST00000589538 STX12Q86Y82 276 aa12.15□□□□□ -0.46
DNMT1-221ENST00000589538 TMEM147Q9BVK8 224 aa12.15□□□□□ -0.46
DNMT1-221ENST00000589538 LYRM2Q9NU23 88 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-221ENST00000589538 RNF24Q9Y225 148 aa12.15□□□□□ -0.46
DNMT1-221ENST00000589538 TP53TG1Q9Y2A0 90 aa12.15□□□□□ -0.46
DNMT1-221ENST00000589538 PTTG1O95997 202 aa12.14□□□□□ -0.47
DNMT1-221ENST00000589538 RPL35AP18077 110 aaKnown RBP12.14□□□□□ -0.47
DNMT1-221ENST00000589538 PLP1P60201 277 aa12.14□□□□□ -0.47
DNMT1-221ENST00000589538 HBG1P69891 147 aa12.14□□□□□ -0.47
DNMT1-221ENST00000589538 HBG2P69892 147 aa12.14□□□□□ -0.47
DNMT1-221ENST00000589538 SLC38A11Q08AI6 406 aa12.14□□□□□ -0.47
DNMT1-221ENST00000589538 ZNF546Q86UE3 836 aa12.14□□□□□ -0.47
DNMT1-221ENST00000589538 STHQ8IWL8 128 aa12.14□□□□□ -0.47
DNMT1-221ENST00000589538 OR8I2Q8N0Y5 310 aa12.14□□□□□ -0.47
DNMT1-221ENST00000589538 C11orf1Q9H5F2 150 aa12.14□□□□□ -0.47
DNMT1-221ENST00000589538 C3orf84H3BNL1 204 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 SSNA1O43805 119 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 HYPMO75409 117 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 ZNF688P0C7X2 276 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 ORM2P19652 201 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 S100A11P31949 105 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 GALR1P47211 349 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 SULT1A1P50225 295 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 RAP2BP61225 183 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 ARL16Q0P5N6 197 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 RAB31Q13636 194 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 PXDC1Q5TGL8 231 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 FAM24BQ8N5W8 94 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 OR1B1Q8NGR6 318 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 GPR82Q96P67 336 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 CSTL1Q9H114 145 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 RETNQ9HD89 108 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 NBEAL2Q6ZNJ1 2754 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 TENM3Q9P273 2699 aa12.13□□□□□ -0.47
DNMT1-221ENST00000589538 FAM24AA6NFZ4 105 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 ZNF98A6NK75 572 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 CST7O76096 145 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 LINC00869P0C866 280 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 GATA2P23769 480 aaPredicted RBP12.12□□□□□ -0.47
DNMT1-221ENST00000589538 ID1P41134 155 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 MEOX2P50222 304 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 ZNF124Q15973 351 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 LEMD1Q68G75 181 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 TMEM252Q8N6L7 170 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 MUC7Q8TAX7 377 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 OVOL2Q9BRP0 275 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 EDA2RQ9HAV5 297 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 UQCC1Q9NVA1 299 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 HIGD1AQ9Y241 93 aa12.12□□□□□ -0.47
DNMT1-221ENST00000589538 E5RGE8 158 aa12.11□□□□□ -0.47
DNMT1-221ENST00000589538 AGPAT2O15120 278 aa12.11□□□□□ -0.47
DNMT1-221ENST00000589538 SPRY2O43597 315 aa12.11□□□□□ -0.47
DNMT1-221ENST00000589538 SIX6O95475 246 aa12.11□□□□□ -0.47
DNMT1-221ENST00000589538 PET100P0DJ07 73 aa12.11□□□□□ -0.47
DNMT1-221ENST00000589538 ATP6V1FQ16864 119 aa12.11□□□□□ -0.47
DNMT1-221ENST00000589538 TMEM41BQ5BJD5 291 aa12.11□□□□□ -0.47
DNMT1-221ENST00000589538 TMEM182Q6ZP80 229 aaPredicted RBP12.11□□□□□ -0.47
DNMT1-221ENST00000589538 SLC25A31Q9H0C2 315 aa12.11□□□□□ -0.47
DNMT1-221ENST00000589538 HUWE1Q7Z6Z7 4374 aaKnown RBP12.11□□□□□ -0.47
DNMT1-221ENST00000589538 OR5G3P0C626 314 aa12.1□□□□□ -0.47
DNMT1-221ENST00000589538 PSMB3P49720 205 aa12.1□□□□□ -0.47
DNMT1-221ENST00000589538 PSMG4Q5JS54 123 aa12.1□□□□□ -0.47
DNMT1-221ENST00000589538 TMEM217Q8N7C4 229 aa12.1□□□□□ -0.47
DNMT1-221ENST00000589538 GATAD1Q8WUU5 269 aa12.1□□□□□ -0.47
DNMT1-221ENST00000589538 RNF183Q96D59 192 aa12.1□□□□□ -0.47
DNMT1-221ENST00000589538 SLC25A39Q9BZJ4 359 aaPredicted RBP12.1□□□□□ -0.47
DNMT1-221ENST00000589538 SLC25A22Q9H936 323 aa12.1□□□□□ -0.47
DNMT1-221ENST00000589538 IGSF23A1L1A6 192 aa12.09□□□□□ -0.47
DNMT1-221ENST00000589538 H3BRN7 92 aa12.09□□□□□ -0.47
DNMT1-221ENST00000589538 SPP1P10451 314 aa12.09□□□□□ -0.47
DNMT1-221ENST00000589538 H2BFSP57053 126 aa12.09□□□□□ -0.47
DNMT1-221ENST00000589538 VWC2Q2TAL6 325 aa12.09□□□□□ -0.47
DNMT1-221ENST00000589538 DEFB135Q30KP9 77 aa12.09□□□□□ -0.47
DNMT1-221ENST00000589538 MORN3Q6PF18 240 aaPredicted RBP12.09□□□□□ -0.47
DNMT1-221ENST00000589538 IL17DQ8TAD2 202 aa12.09□□□□□ -0.47
DNMT1-221ENST00000589538 SHANK2-AS3Q9BTD1 123 aa12.09□□□□□ -0.47
DNMT1-221ENST00000589538 ARL6Q9H0F7 186 aa12.09□□□□□ -0.47
DNMT1-221ENST00000589538 SLC25A32Q9H2D1 315 aa12.09□□□□□ -0.47
DNMT1-221ENST00000589538 DOK5Q9P104 306 aa12.09□□□□□ -0.47
DNMT1-221ENST00000589538 ELOA3CA0A087WX78 387 aaPredicted RBP12.08□□□□□ -0.48
DNMT1-221ENST00000589538 ISLRO14498 428 aa12.08□□□□□ -0.48
DNMT1-221ENST00000589538 MPDU1O75352 247 aa12.08□□□□□ -0.48
DNMT1-221ENST00000589538 LYL1P12980 280 aa12.08□□□□□ -0.48
DNMT1-221ENST00000589538 RPL7P18124 248 aaKnown RBP12.08□□□□□ -0.48
DNMT1-221ENST00000589538 CAMLGP49069 296 aa12.08□□□□□ -0.48
DNMT1-221ENST00000589538 BAXQ07812 192 aa12.08□□□□□ -0.48
DNMT1-221ENST00000589538 LRRC37A5PQ49AS3 106 aa12.08□□□□□ -0.48
DNMT1-221ENST00000589538 PPP1R1CQ8WVI7 109 aa12.08□□□□□ -0.48
DNMT1-221ENST00000589538 WDR83OSQ9Y284 106 aa12.08□□□□□ -0.48
DNMT1-221ENST00000589538 CA1P00915 261 aaPredicted RBP12.07□□□□□ -0.48
DNMT1-221ENST00000589538 ACTL10Q5JWF8 245 aa12.07□□□□□ -0.48
DNMT1-221ENST00000589538 Q6ZRG5 221 aa12.07□□□□□ -0.48
DNMT1-221ENST00000589538 TRPT1Q86TN4 253 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms