RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 PRSS22Q9GZN4 317 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 TMEM160Q9NX00 188 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 MRPL27Q9P0M9 148 aaKnown RBP9.39□□□□□ -0.91
CCBE1-203ENST00000589116 LINC00527Q9UJ94 153 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 OR2T8A6NH00 312 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 F6UZH7 168 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 IGLV1-40P01703 118 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 TRGV3P03979 118 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 CTSGP08311 255 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 MORN5Q5VZ52 161 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 FAM90A2PQ658T7 463 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 ZNF600Q6ZNG1 722 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 Q6ZS46 218 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 SIGLECL1Q8N7X8 197 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 ZNF491Q8N8L2 437 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 OR4F5Q8NH21 305 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 CCDC140Q96MF4 163 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 NOL4LQ96MY1 436 aaPredicted RBP9.39□□□□□ -0.91
CCBE1-203ENST00000589116 MS4A10Q96PG2 267 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 OR4F4Q96R69 305 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 YAE1D1Q9NRH1 226 aa9.39□□□□□ -0.91
CCBE1-203ENST00000589116 TMEM89A2RUT3 159 aa9.38□□□□□ -0.91
CCBE1-203ENST00000589116 FAM74A7A6NL05 159 aa9.38□□□□□ -0.91
CCBE1-203ENST00000589116 IGHV3-23P01764 117 aa9.38□□□□□ -0.91
CCBE1-203ENST00000589116 IL4P05112 153 aa9.38□□□□□ -0.91
CCBE1-203ENST00000589116 S100A7P31151 101 aa9.38□□□□□ -0.91
CCBE1-203ENST00000589116 GPR183P32249 361 aa9.38□□□□□ -0.91
CCBE1-203ENST00000589116 TPPP2P59282 170 aa9.38□□□□□ -0.91
CCBE1-203ENST00000589116 UBE2G2P60604 165 aa9.38□□□□□ -0.91
CCBE1-203ENST00000589116 UBE2L3P68036 154 aaKnown RBP9.38□□□□□ -0.91
CCBE1-203ENST00000589116 CST9LP1Q5W188 147 aa9.38□□□□□ -0.91
CCBE1-203ENST00000589116 IL17RELQ6ZVW7 336 aa9.38□□□□□ -0.91
CCBE1-203ENST00000589116 PAXXQ9BUH6 204 aa9.38□□□□□ -0.91
CCBE1-203ENST00000589116 SLC25A39Q9BZJ4 359 aaPredicted RBP9.38□□□□□ -0.91
CCBE1-203ENST00000589116 NKX6-2Q9C056 277 aaPredicted RBP9.38□□□□□ -0.91
CCBE1-203ENST00000589116 OR51M1Q9H341 326 aa9.38□□□□□ -0.91
CCBE1-203ENST00000589116 RNF24Q9Y225 148 aa9.38□□□□□ -0.91
CCBE1-203ENST00000589116 TRAV5A0A0B4J249 113 aa9.37□□□□□ -0.91
CCBE1-203ENST00000589116 A0A1W2PRE2 83 aa9.37□□□□□ -0.91
CCBE1-203ENST00000589116 H3BRN7 92 aa9.37□□□□□ -0.91
CCBE1-203ENST00000589116 TGOLN2O43493 480 aa9.37□□□□□ -0.91
CCBE1-203ENST00000589116 ADMP35318 185 aa9.37□□□□□ -0.91
CCBE1-203ENST00000589116 FAM74A3Q4VXF1 159 aa9.37□□□□□ -0.91
CCBE1-203ENST00000589116 NIPSNAP3BQ9BS92 247 aa9.37□□□□□ -0.91
CCBE1-203ENST00000589116 SHANK2-AS3Q9BTD1 123 aa9.37□□□□□ -0.91
CCBE1-203ENST00000589116 A0A0G2JLM5 398 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 HAX1O00165 279 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 WIPF1O43516 503 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 IGHG4P01861 327 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 CLEC3BP05452 202 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 OR10J4P0C629 311 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 ATP5G3P48201 142 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 CEBPGP53567 150 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 RELQ04864 619 aaPredicted RBP9.36□□□□□ -0.91
CCBE1-203ENST00000589116 FAM209BQ5JX69 171 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 CLRN3Q8NCR9 226 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 CHRDL1Q9BU40 450 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 ZNF702PQ9H963 129 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 TMEM14CQ9P0S9 112 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 YTHDF2Q9Y5A9 579 aaKnown RBP9.36□□□□□ -0.91
CCBE1-203ENST00000589116 BMPR1BO00238 502 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 PF4V1P10720 104 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 GP9P14770 177 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 USF2Q15853 346 aaPredicted RBP9.36□□□□□ -0.91
CCBE1-203ENST00000589116 ATRAIDQ6UW56 229 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 CLEC19AQ6UXS0 136 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 Q8N2B8 174 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 FXYD5Q96DB9 178 aa9.36□□□□□ -0.91
CCBE1-203ENST00000589116 PUS1Q9Y606 427 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCBE1-203ENST00000589116 HIVEP2P31629 2446 aa9.35□□□□□ -0.91
CCBE1-203ENST00000589116 H3BQ15 152 aa9.35□□□□□ -0.91
CCBE1-203ENST00000589116 SCO1O75880 301 aa9.35□□□□□ -0.91
CCBE1-203ENST00000589116 PYYP10082 97 aa9.35□□□□□ -0.91
CCBE1-203ENST00000589116 SLC35B1P78383 322 aa9.35□□□□□ -0.91
CCBE1-203ENST00000589116 PNRC1Q12796 327 aaPredicted RBP9.35□□□□□ -0.91
CCBE1-203ENST00000589116 TMEM95Q3KNT9 176 aa9.35□□□□□ -0.91
CCBE1-203ENST00000589116 TMEM190Q8WZ59 177 aa9.35□□□□□ -0.91
CCBE1-203ENST00000589116 TMEM158Q8WZ71 300 aa9.35□□□□□ -0.91
CCBE1-203ENST00000589116 C11orf52Q96A22 123 aa9.35□□□□□ -0.91
CCBE1-203ENST00000589116 PARLQ9H300 379 aa9.35□□□□□ -0.91
CCBE1-203ENST00000589116 ZNF727A8MUV8 499 aa9.34□□□□□ -0.91
CCBE1-203ENST00000589116 PSMB8P28062 276 aa9.34□□□□□ -0.91
CCBE1-203ENST00000589116 RAB9AP51151 201 aa9.34□□□□□ -0.91
CCBE1-203ENST00000589116 KIAA0141Q14154 515 aaPredicted RBP9.34□□□□□ -0.91
CCBE1-203ENST00000589116 RHEBQ15382 184 aa9.34□□□□□ -0.91
CCBE1-203ENST00000589116 AWAT1Q58HT5 328 aa9.34□□□□□ -0.91
CCBE1-203ENST00000589116 BPIFA4PQ86YQ2 179 aa9.34□□□□□ -0.91
CCBE1-203ENST00000589116 TVP23CQ96ET8 276 aa9.34□□□□□ -0.91
CCBE1-203ENST00000589116 SMIM7Q9BQ49 75 aa9.34□□□□□ -0.91
CCBE1-203ENST00000589116 TCEAL7Q9BRU2 100 aa9.34□□□□□ -0.91
CCBE1-203ENST00000589116 ZFAND3Q9H8U3 227 aa9.34□□□□□ -0.91
CCBE1-203ENST00000589116 RABAC1Q9UI14 185 aa9.34□□□□□ -0.91
CCBE1-203ENST00000589116 MXRA5Q9NR99 2828 aa9.34□□□□□ -0.91
CCBE1-203ENST00000589116 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.33□□□□□ -0.92
CCBE1-203ENST00000589116 DNAJC9-AS1A6NH13 148 aa9.33□□□□□ -0.92
CCBE1-203ENST00000589116 ZNF98A6NK75 572 aa9.33□□□□□ -0.92
CCBE1-203ENST00000589116 CLDN34H7C241 214 aa9.33□□□□□ -0.92
CCBE1-203ENST00000589116 M0R036 132 aa9.33□□□□□ -0.92
CCBE1-203ENST00000589116 ARL3P36405 182 aa9.33□□□□□ -0.92
CCBE1-203ENST00000589116 ZNF343Q6P1L6 599 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms