RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 DNAJC4Q9NNZ3 241 aa17.33■□□□□ 0.37
ACTN4-210ENST00000588618 PFDN2Q9UHV9 154 aa17.33■□□□□ 0.37
ACTN4-210ENST00000588618 HIGD1AQ9Y241 93 aa17.33■□□□□ 0.37
ACTN4-210ENST00000588618 IFNA7P01567 189 aa17.33■□□□□ 0.36
ACTN4-210ENST00000588618 MYCNOSP40205 109 aa17.33■□□□□ 0.36
ACTN4-210ENST00000588618 FHL3Q13643 280 aa17.33■□□□□ 0.36
ACTN4-210ENST00000588618 USF2Q15853 346 aaPredicted RBP17.33■□□□□ 0.36
ACTN4-210ENST00000588618 TMEM41BQ5BJD5 291 aa17.33■□□□□ 0.36
ACTN4-210ENST00000588618 OR10G4Q8NGN3 311 aa17.33■□□□□ 0.36
ACTN4-210ENST00000588618 OR10G9Q8NGN4 311 aa17.33■□□□□ 0.36
ACTN4-210ENST00000588618 OR10G7Q8NGN6 311 aa17.33■□□□□ 0.36
ACTN4-210ENST00000588618 GATAD1Q8WUU5 269 aa17.33■□□□□ 0.36
ACTN4-210ENST00000588618 UFC1Q9Y3C8 167 aa17.33■□□□□ 0.36
ACTN4-210ENST00000588618 RAB2AP61019 212 aa17.32■□□□□ 0.36
ACTN4-210ENST00000588618 PATE2Q6UY27 113 aa17.32■□□□□ 0.36
ACTN4-210ENST00000588618 TMEM37Q8WXS4 190 aa17.32■□□□□ 0.36
ACTN4-210ENST00000588618 NARS2Q96I59 477 aaKnown RBP17.32■□□□□ 0.36
ACTN4-210ENST00000588618 DAZ1Q9NQZ3 744 aaKnown RBP17.32■□□□□ 0.36
ACTN4-210ENST00000588618 VWFP04275 2813 aa17.32■□□□□ 0.36
ACTN4-210ENST00000588618 A0A1W2PPV4 95 aa17.31■□□□□ 0.36
ACTN4-210ENST00000588618 NPPCP23582 126 aa17.31■□□□□ 0.36
ACTN4-210ENST00000588618 FHITP49789 147 aa17.31■□□□□ 0.36
ACTN4-210ENST00000588618 KLF5Q13887 457 aaPredicted RBP17.31■□□□□ 0.36
ACTN4-210ENST00000588618 RPRMQ9NS64 109 aa17.31■□□□□ 0.36
ACTN4-210ENST00000588618 LGALS9O00182 355 aa17.3■□□□□ 0.36
ACTN4-210ENST00000588618 ZNF207O43670 478 aaKnown RBP17.3■□□□□ 0.36
ACTN4-210ENST00000588618 EIF3GO75821 320 aaKnown RBP eCLIP17.3■□□□□ 0.364e-7■□□□□ 10.8
ACTN4-210ENST00000588618 RAB5CP51148 216 aa17.3■□□□□ 0.36
ACTN4-210ENST00000588618 FAM78BQ5VT40 261 aa17.3■□□□□ 0.36
ACTN4-210ENST00000588618 LINC00305Q7Z4B0 112 aa17.3■□□□□ 0.36
ACTN4-210ENST00000588618 REC114Q7Z4M0 266 aa17.3■□□□□ 0.36
ACTN4-210ENST00000588618 RNF2Q99496 336 aa17.3■□□□□ 0.36
ACTN4-210ENST00000588618 PEMTQ9UBM1 199 aa17.3■□□□□ 0.36
ACTN4-210ENST00000588618 RHOBP62745 196 aa17.3■□□□□ 0.36
ACTN4-210ENST00000588618 UHRF2Q96PU4 802 aa17.3■□□□□ 0.36
ACTN4-210ENST00000588618 MRPL27Q9P0M9 148 aaKnown RBP17.3■□□□□ 0.36
ACTN4-210ENST00000588618 TRRAPQ9Y4A5 3859 aa17.29■□□□□ 0.36
ACTN4-210ENST00000588618 SULT1A2P50226 295 aa17.29■□□□□ 0.36
ACTN4-210ENST00000588618 FAM122CQ6P4D5 195 aa17.29■□□□□ 0.36
ACTN4-210ENST00000588618 RPP25LQ8N5L8 163 aaKnown RBP17.29■□□□□ 0.36
ACTN4-210ENST00000588618 RNF141Q8WVD5 230 aa17.29■□□□□ 0.36
ACTN4-210ENST00000588618 DLX4Q92988 240 aaPredicted RBP17.29■□□□□ 0.36
ACTN4-210ENST00000588618 SSX7Q7RTT5 188 aa17.28■□□□□ 0.36
ACTN4-210ENST00000588618 ACTR3CQ9C0K3 210 aaPredicted RBP17.28■□□□□ 0.36
ACTN4-210ENST00000588618 UBQLN2Q9UHD9 624 aa17.28■□□□□ 0.36
ACTN4-210ENST00000588618 RNF24Q9Y225 148 aa17.28■□□□□ 0.36
ACTN4-210ENST00000588618 K7EMT4 169 aa17.27■□□□□ 0.36
ACTN4-210ENST00000588618 CDC34P49427 236 aaPredicted RBP17.27■□□□□ 0.36
ACTN4-210ENST00000588618 ZNF726P1Q15940 193 aa17.27■□□□□ 0.36
ACTN4-210ENST00000588618 TM4SF20Q53R12 229 aa17.27■□□□□ 0.36
ACTN4-210ENST00000588618 MORN5Q5VZ52 161 aa17.27■□□□□ 0.36
ACTN4-210ENST00000588618 SPATA31B1PQ5VZV4 182 aa17.27■□□□□ 0.36
ACTN4-210ENST00000588618 DPPA3Q6W0C5 159 aa17.27■□□□□ 0.36
ACTN4-210ENST00000588618 OR9G4Q8NGQ1 327 aa17.27■□□□□ 0.36
ACTN4-210ENST00000588618 FAM213BQ8TBF2 198 aa17.27■□□□□ 0.36
ACTN4-210ENST00000588618 MRPL32Q9BYC8 188 aaKnown RBP17.27■□□□□ 0.36
ACTN4-210ENST00000588618 SLC25A39Q9BZJ4 359 aaPredicted RBP17.27■□□□□ 0.36
ACTN4-210ENST00000588618 A8MWP6 167 aa17.27■□□□□ 0.35
ACTN4-210ENST00000588618 BMI1P35226 326 aa17.27■□□□□ 0.35
ACTN4-210ENST00000588618 PCNPQ8WW12 178 aaKnown RBP17.27■□□□□ 0.35
ACTN4-210ENST00000588618 SEPSECSQ9HD40 501 aaKnown RBP17.27■□□□□ 0.35
ACTN4-210ENST00000588618 FUT9Q9Y231 359 aa17.27■□□□□ 0.35
ACTN4-210ENST00000588618 A0A1W2PS18 150 aa17.26■□□□□ 0.35
ACTN4-210ENST00000588618 M0QZ24 198 aa17.26■□□□□ 0.35
ACTN4-210ENST00000588618 OVOL1O14753 267 aa17.26■□□□□ 0.35
ACTN4-210ENST00000588618 CRYBB3P26998 211 aa17.26■□□□□ 0.35
ACTN4-210ENST00000588618 SLC25A22Q9H936 323 aa17.26■□□□□ 0.35
ACTN4-210ENST00000588618 TAS2R45P59539 299 aa17.25■□□□□ 0.35
ACTN4-210ENST00000588618 GRAMD2BQ96HH9 432 aa17.25■□□□□ 0.35
ACTN4-210ENST00000588618 SHANK2-AS3Q9BTD1 123 aa17.25■□□□□ 0.35
ACTN4-210ENST00000588618 IGHV3-49A0A0A0MS15 119 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 ZNF705EA8MWA4 302 aaPredicted RBP17.24■□□□□ 0.35
ACTN4-210ENST00000588618 EDN2P20800 178 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 TMEM231Q9H6L2 316 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 ANK2Q01484 3957 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 IGHV3OR16-13A0A075B7E8 117 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 IGHV3-74A0A0B4J1X5 117 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 IGHV7-4-1A0A0J9YVY3 117 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 TMEM213A2RRL7 107 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 ZNF98A6NK75 572 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 H3BRN7 92 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 LRRC20Q8TCA0 184 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 MARC2Q969Z3 335 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 MDFIQ99750 246 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 ELOVL1Q9BW60 279 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 SCRT1Q9BWW7 348 aa17.24■□□□□ 0.35
ACTN4-210ENST00000588618 IGHV3-66A0A0C4DH42 116 aa17.23■□□□□ 0.35
ACTN4-210ENST00000588618 CTXND1A0A1B0GTU2 59 aa17.23■□□□□ 0.35
ACTN4-210ENST00000588618 SEC14L6B5MCN3 397 aa17.23■□□□□ 0.35
ACTN4-210ENST00000588618 LEMD1Q68G75 181 aa17.23■□□□□ 0.35
ACTN4-210ENST00000588618 ZNF767PQ75MW2 155 aa17.23■□□□□ 0.35
ACTN4-210ENST00000588618 MIR17HGQ75NE6 70 aa17.23■□□□□ 0.35
ACTN4-210ENST00000588618 OR8I2Q8N0Y5 310 aa17.23■□□□□ 0.35
ACTN4-210ENST00000588618 RAB24Q969Q5 203 aa17.23■□□□□ 0.35
ACTN4-210ENST00000588618 TECRQ9NZ01 308 aaKnown RBP17.23■□□□□ 0.35
ACTN4-210ENST00000588618 C2orf70A6NJV1 201 aa17.22■□□□□ 0.35
ACTN4-210ENST00000588618 RGS13O14921 159 aa17.22■□□□□ 0.35
ACTN4-210ENST00000588618 HMGB3O15347 200 aaKnown RBP17.22■□□□□ 0.35
ACTN4-210ENST00000588618 APOHP02749 345 aaPredicted RBP17.22■□□□□ 0.35
ACTN4-210ENST00000588618 C8orf88P0DMB2 117 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms