RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 SMR3AQ99954 134 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 SCRT1Q9BWW7 348 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 SLC35B3Q9H1N7 401 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 DOK5Q9P104 306 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 CSMD2Q7Z408 3487 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 NIPBLQ6KC79 2804 aaeCLIP8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 BMPR1BO00238 502 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 OR7C2O60412 319 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 IL4P05112 153 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 ARL14EPLP0DKL9 152 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 ZP3P21754 424 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 LORP23490 312 aaPredicted RBP8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 PSMB8P28062 276 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 HILS1P60008 231 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 KRTAP21-3Q3LHN1 58 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 SPATA31B1PQ5VZV4 182 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 ZNF343Q6P1L6 599 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 RARRES2Q99969 163 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 CHRDL1Q9BU40 450 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 PAXXQ9BUH6 204 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 NKX6-2Q9C056 277 aaPredicted RBP8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 KLK15Q9H2R5 256 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 OR51M1Q9H341 326 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 TMPRSS5Q9H3S3 457 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 ARL2-SNX15V9GYD0 113 aa8.15□□□□□ -1.1
CHMP1B-202ENST00000588284 F8W036 122 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 PAGE4O60829 102 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 ADMP35318 185 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 ARL3P36405 182 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 ICAM4Q14773 271 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 Q6ZSV7 163 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 ZNF329Q86UD4 541 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 RNF152Q8N8N0 203 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 OR5AU1Q8NGC0 362 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 OR4X2Q8NGF9 303 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 RXFP4Q8TDU9 374 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 FAM167A-AS1Q96KT0 104 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 CCDC140Q96MF4 163 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 SEC11CQ9BY50 192 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 SLC25A39Q9BZJ4 359 aaPredicted RBP8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 TMEM231Q9H6L2 316 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 GNB4Q9HAV0 340 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 SERTAD4Q9NUC0 356 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 RABAC1Q9UI14 185 aa8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 PUS1Q9Y606 427 aaKnown RBP eCLIP8.14□□□□□ -1.11
CHMP1B-202ENST00000588284 TRAV5A0A0B4J249 113 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 GGCTO75223 188 aaKnown RBP8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 EIF3GO75821 320 aaKnown RBP eCLIP8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 SRP19P09132 144 aaKnown RBP8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 DEFA5Q01523 94 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 MEF2BQ02080 365 aaPredicted RBP8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 TMEM95Q3KNT9 176 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 SOHLH1Q5JUK2 328 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 TOMM20LQ6UXN7 152 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 BPIFA4PQ86YQ2 179 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 WFDC12Q8WWY7 111 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 TMEM190Q8WZ59 177 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 UBE2E2Q96LR5 201 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 UHRF2Q96PU4 802 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 SHANK2-AS3Q9BTD1 123 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 SLC25A2Q9BXI2 301 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 C16orf95Q9H693 158 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 ESM1Q9NQ30 184 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 TMEM14CQ9P0S9 112 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 PEF1Q9UBV8 284 aaKnown RBP8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 AKAP9Q99996 3911 aa8.13□□□□□ -1.11
CHMP1B-202ENST00000588284 A0A1W2PRE2 83 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 ZNF98A6NK75 572 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 ADARB2-AS1A8MUL3 147 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 F6UZH7 168 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 TMEM250H0YL14 139 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 H3BRN7 92 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 NDUFA4O00483 81 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 PDE6DO43924 150 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 SFTA3P0C7M3 94 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 HIST1H1EP10412 219 aaKnown RBP8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 NPPCP23582 126 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 FAM106AQ4KMX7 169 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 C10orf91Q5T1B1 145 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 CST9LP1Q5W188 147 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 KLHDC1Q8N7A1 406 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 LINC00052Q96N35 136 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 MAP1AP78559 2803 aaPredicted RBP8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 FBN3Q75N90 2809 aa8.12□□□□□ -1.11
CHMP1B-202ENST00000588284 C9JQL5 133 aa8.11□□□□□ -1.11
CHMP1B-202ENST00000588284 C11orf94C9JXX5 98 aa8.11□□□□□ -1.11
CHMP1B-202ENST00000588284 TCF21O43680 179 aa8.11□□□□□ -1.11
CHMP1B-202ENST00000588284 CRLF1O75462 422 aa8.11□□□□□ -1.11
CHMP1B-202ENST00000588284 NDUFA7O95182 113 aa8.11□□□□□ -1.11
CHMP1B-202ENST00000588284 IGHV3-11P01762 117 aa8.11□□□□□ -1.11
CHMP1B-202ENST00000588284 NBEAP1P0C6P0 100 aa8.11□□□□□ -1.11
CHMP1B-202ENST00000588284 RPL7P18124 248 aaKnown RBP8.11□□□□□ -1.11
CHMP1B-202ENST00000588284 UBE2L3P68036 154 aaKnown RBP8.11□□□□□ -1.11
CHMP1B-202ENST00000588284 KIAA0141Q14154 515 aaPredicted RBP8.11□□□□□ -1.11
CHMP1B-202ENST00000588284 USF2Q15853 346 aaPredicted RBP8.11□□□□□ -1.11
CHMP1B-202ENST00000588284 FAM74A3Q4VXF1 159 aa8.11□□□□□ -1.11
CHMP1B-202ENST00000588284 C1orf194Q5T5A4 169 aa8.11□□□□□ -1.11
CHMP1B-202ENST00000588284 OR4F17Q8NGA8 305 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms