RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 WNK2Q9Y3S1 2297 aa11.65□□□□□ -0.54
CCDC43-203ENST00000588210 SMIM27A0A1W2PRY6 76 aa11.65□□□□□ -0.54
CCDC43-203ENST00000588210 F2Z2F3 143 aa11.65□□□□□ -0.54
CCDC43-203ENST00000588210 CCL3L1P16619 93 aa11.65□□□□□ -0.54
CCDC43-203ENST00000588210 IBA57Q5T440 356 aaKnown RBP11.65□□□□□ -0.54
CCDC43-203ENST00000588210 C8orf31Q8N9H6 132 aa11.65□□□□□ -0.54
CCDC43-203ENST00000588210 OR5AU1Q8NGC0 362 aa11.65□□□□□ -0.54
CCDC43-203ENST00000588210 FLYWCH2Q96CP2 140 aaKnown RBP11.65□□□□□ -0.54
CCDC43-203ENST00000588210 HSPB9Q9BQS6 159 aa11.65□□□□□ -0.54
CCDC43-203ENST00000588210 NSD1Q96L73 2696 aaPredicted RBP11.65□□□□□ -0.54
CCDC43-203ENST00000588210 FN1P02751 2386 aaKnown RBP11.64□□□□□ -0.55
CCDC43-203ENST00000588210 AMY1AP04745 511 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 NUTF2P61970 127 aaKnown RBP11.64□□□□□ -0.55
CCDC43-203ENST00000588210 FXYD3Q14802 87 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 OR10J3Q5JRS4 329 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 MORN5Q5VZ52 161 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 TMEM200BQ69YZ2 307 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 TOMM20LQ6UXN7 152 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 LINC00311Q8N616 119 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 OR4C13Q8NGP0 309 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 OR1L4Q8NGR5 311 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 OR2T6Q8NHC8 308 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 C20orf144Q9BQM9 153 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 SNHG12Q9BXW3 62 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 ZNF430Q9H8G1 570 aaPredicted RBP11.64□□□□□ -0.55
CCDC43-203ENST00000588210 DNAJC4Q9NNZ3 241 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 NAT8BQ9UHF3 227 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 SONP18583 2426 aaKnown RBP11.64□□□□□ -0.55
CCDC43-203ENST00000588210 CGB1A6NKQ9 187 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 IL17RELQ6ZVW7 336 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 THAP8Q8NA92 274 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 GNB4Q9HAV0 340 aa11.64□□□□□ -0.55
CCDC43-203ENST00000588210 TRAV5A0A0B4J249 113 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 TCRBV4S1A1TA0A5B7 111 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 E7EUB6 86 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 COX7A2P2O60397 106 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 HLA-DQA1P01909 254 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 BPIFB3P59826 476 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 WT1-ASQ06250 92 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 MRPL52Q86TS9 123 aaKnown RBP11.63□□□□□ -0.55
CCDC43-203ENST00000588210 TGIF2LXQ8IUE1 241 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 SAMD10Q9BYL1 202 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 M0R143 59 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 IGLV2-23P01705 113 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 MGST1P10620 155 aaKnown RBP11.63□□□□□ -0.55
CCDC43-203ENST00000588210 SRD5A1P18405 259 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 RAB4AP20338 218 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 REG1BP48304 166 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 SUB1P53999 127 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCDC43-203ENST00000588210 KIR3DL3Q8N743 410 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 OR10X1Q8NGY0 326 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 FNDC4Q9H6D8 234 aaPredicted RBP11.63□□□□□ -0.55
CCDC43-203ENST00000588210 WASHC3Q9Y3C0 194 aa11.63□□□□□ -0.55
CCDC43-203ENST00000588210 IGKV1D-37A0A075B6S9 117 aa11.62□□□□□ -0.55
CCDC43-203ENST00000588210 IZUMO1RA6ND01 250 aa11.62□□□□□ -0.55
CCDC43-203ENST00000588210 BRS3P32247 399 aa11.62□□□□□ -0.55
CCDC43-203ENST00000588210 COMPP49747 757 aaPredicted RBP11.62□□□□□ -0.55
CCDC43-203ENST00000588210 ZNF137PP52743 207 aa11.62□□□□□ -0.55
CCDC43-203ENST00000588210 ARF6P62330 175 aa11.62□□□□□ -0.55
CCDC43-203ENST00000588210 SSBP2P81877 361 aaPredicted RBP11.62□□□□□ -0.55
CCDC43-203ENST00000588210 TMEM183BQ1AE95 376 aa11.62□□□□□ -0.55
CCDC43-203ENST00000588210 C10orf113Q5VZT2 155 aa11.62□□□□□ -0.55
CCDC43-203ENST00000588210 FAM231DQ6ZW35 169 aa11.62□□□□□ -0.55
CCDC43-203ENST00000588210 ST6GALNAC6Q969X2 333 aa11.62□□□□□ -0.55
CCDC43-203ENST00000588210 PAXXQ9BUH6 204 aa11.62□□□□□ -0.55
CCDC43-203ENST00000588210 ZNF355PQ9NSJ1 428 aa11.62□□□□□ -0.55
CCDC43-203ENST00000588210 ZFHX3Q15911 3703 aa11.62□□□□□ -0.55
CCDC43-203ENST00000588210 NAV3Q8IVL0 2385 aa11.62□□□□□ -0.55
CCDC43-203ENST00000588210 TOX4O94842 621 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 CD33P20138 364 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 TCL1AP56279 114 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 C1orf122Q6ZSJ8 110 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 ZNF329Q86UD4 541 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 KCNS1Q96KK3 526 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 SIRPDQ9H106 197 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 ONECUT1Q9UBC0 465 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 M0R1W7 72 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 SPINK4O60575 86 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 FSHBP01225 129 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 GPX1P07203 203 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 SCGB2A2Q13296 93 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 C10orf55Q5SWW7 151 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 RASL11AQ6T310 242 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 PATE2Q6UY27 113 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 SIGLECL1Q8N7X8 197 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 WIPF2Q8TF74 440 aaPredicted RBP11.61□□□□□ -0.55
CCDC43-203ENST00000588210 ZNF586Q9NXT0 402 aa11.61□□□□□ -0.55
CCDC43-203ENST00000588210 AMMECR1Q9Y4X0 333 aaPredicted RBP11.61□□□□□ -0.55
CCDC43-203ENST00000588210 BMPR1BO00238 502 aa11.6□□□□□ -0.55
CCDC43-203ENST00000588210 PEX7O00628 323 aa11.6□□□□□ -0.55
CCDC43-203ENST00000588210 PYYP10082 97 aa11.6□□□□□ -0.55
CCDC43-203ENST00000588210 HOXB4P17483 251 aaPredicted RBP11.6□□□□□ -0.55
CCDC43-203ENST00000588210 DLX6P56179 175 aa11.6□□□□□ -0.55
CCDC43-203ENST00000588210 DIAPH2-AS1Q14236 149 aa11.6□□□□□ -0.55
CCDC43-203ENST00000588210 MRPL54Q6P161 138 aaKnown RBP11.6□□□□□ -0.55
CCDC43-203ENST00000588210 NPIPB3Q92617 1050 aa11.6□□□□□ -0.55
CCDC43-203ENST00000588210 FXYD5Q96DB9 178 aa11.6□□□□□ -0.55
CCDC43-203ENST00000588210 SERTAD4Q9NUC0 356 aa11.6□□□□□ -0.55
CCDC43-203ENST00000588210 FBXL7Q9UJT9 491 aa11.6□□□□□ -0.55
CCDC43-203ENST00000588210 SLC35B1P78383 322 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms