RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 BEAN1Q3B7T3 259 aa8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 RPL7L1Q6DKI1 246 aaKnown RBP8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 KCNRGQ8N5I3 272 aa8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 SCGB1C1Q8TD33 95 aa8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 PARD6GQ9BYG4 376 aaPredicted RBP8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 GPR61Q9BZJ8 451 aa8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 ARL6Q9H0F7 186 aa8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 CYTL1Q9NRR1 136 aa8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 SLC39A9Q9NUM3 307 aa8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 TECRQ9NZ01 308 aaKnown RBP8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 PKD1L1Q8TDX9 2849 aa8.07□□□□□ -1.12
SMARCA4-213ENST00000587988 ZNF785A8K8V0 405 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 BUB3O43684 328 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 HYPMO75409 117 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 OR5G3P0C626 314 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 EGFEM1PQ0D2K5 195 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 ZNF266Q14584 549 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 LGALSLQ3ZCW2 172 aaPredicted RBP8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 GCSAMLQ5JQS6 135 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 FAM90A2PQ658T7 463 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 C16orf54Q6UWD8 224 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 TMEM61Q8N0U2 210 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 TMEM37Q8WXS4 190 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 UHRF2Q96PU4 802 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 ARV1Q9H2C2 271 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 HIGD1AQ9Y241 93 aa8.06□□□□□ -1.12
SMARCA4-213ENST00000587988 IGKV3-7A0A075B6H7 116 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 A0A0D9SG52 128 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 A0A1W2PS18 150 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 ZNF98A6NK75 572 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 H3BRN7 92 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 KPRPQ5T749 579 aaPredicted RBP8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 MORN5Q5VZ52 161 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 LEMD1Q68G75 181 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 Q6ZRG5 221 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 TMUB2Q71RG4 321 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 TCF24Q7RTU0 167 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 ZNF709Q8N972 641 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 HSD17B11Q8NBQ5 300 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 GLMPQ8WWB7 406 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 PPP1R14BQ96C90 147 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 NARS2Q96I59 477 aaKnown RBP8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 HYLS1Q96M11 299 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 ARPC5LQ9BPX5 153 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 SCRT1Q9BWW7 348 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 SLC25A39Q9BZJ4 359 aaPredicted RBP8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 DNAJC4Q9NNZ3 241 aa8.05□□□□□ -1.12
SMARCA4-213ENST00000587988 C17orf112F2Z3M2 114 aa8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 TAAR5O14804 337 aa8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 COX7A2P2O60397 106 aa8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 PRB2P02812 416 aaPredicted RBP8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 ATP6V0CP27449 155 aa8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 ZFP69Q49AA0 526 aa8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 PXDC1Q5TGL8 231 aa8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 LCN12Q6JVE5 192 aa8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 RBPMS2Q6ZRY4 209 aaKnown RBP8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 LINC00305Q7Z4B0 112 aa8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 OR2K2Q8NGT1 345 aa8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 PRR25Q96S07 402 aa8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 SHANK2-AS3Q9BTD1 123 aa8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 SH3BGRL3Q9H299 93 aa8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 TMEM231Q9H6L2 316 aa8.04□□□□□ -1.12
SMARCA4-213ENST00000587988 ELOA3CA0A087WX78 387 aaPredicted RBP8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 BORCS7-ASMTA0A0B4J1R7 106 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 TRAV5A0A0B4J249 113 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 TRAV25A0A0B4J276 109 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 TSPAN4O14817 238 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 BCL2L11O43521 198 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 GP9P14770 177 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 BMI1P35226 326 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 NKX2-5P52952 324 aaPredicted RBP8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 GUCA2BQ16661 112 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 FFAR4Q5NUL3 377 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 C10orf113Q5VZT2 155 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 LAMTOR1Q6IAA8 161 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 SIGLEC15Q6ZMC9 328 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 GBGT1Q8N5D6 347 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 OR1L4Q8NGR5 311 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 GRAMD2BQ96HH9 432 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 SLC25A32Q9H2D1 315 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 SLC25A22Q9H936 323 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 ZNF256Q9Y2P7 627 aaPredicted RBP8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 TIMM9Q9Y5J7 89 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 MGAM2Q2M2H8 2515 aa8.03□□□□□ -1.12
SMARCA4-213ENST00000587988 SORL1Q92673 2214 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 KANTRA0A1W2PQU2 76 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 JTBO76095 146 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 TFPI2P48307 235 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 RPL11P62913 178 aaKnown RBP8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 C1orf194Q5T5A4 169 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 SPATA31B1PQ5VZV4 182 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 WFDC3Q8IUB2 231 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 OR8I2Q8N0Y5 310 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 C9orf62Q8N4C0 152 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 GATAD1Q8WUU5 269 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 C17orf77Q96MU5 243 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 PFDN5Q99471 154 aa8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 PSMG3Q9BT73 122 aaPredicted RBP8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 ZNF471Q9BX82 626 aaPredicted RBP8.02□□□□□ -1.13
SMARCA4-213ENST00000587988 MS4A6AQ9H2W1 248 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms