RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 OR8I2Q8N0Y5 310 aa10.3□□□□□ -0.76
VMP1-206ENST00000587945 THAP8Q8NA92 274 aa10.3□□□□□ -0.76
VMP1-206ENST00000587945 OR4B1Q8NGF8 309 aa10.3□□□□□ -0.76
VMP1-206ENST00000587945 COQ8AQ8NI60 647 aa10.3□□□□□ -0.76
VMP1-206ENST00000587945 SLC25A21Q9BQT8 299 aaPredicted RBP10.3□□□□□ -0.76
VMP1-206ENST00000587945 SAV1Q9H4B6 383 aaPredicted RBP10.3□□□□□ -0.76
VMP1-206ENST00000587945 HERC2O95714 4834 aa10.3□□□□□ -0.76
VMP1-206ENST00000587945 PIGBOS1A0A0B4J2F0 54 aa10.29□□□□□ -0.76
VMP1-206ENST00000587945 F6UB75 175 aa10.29□□□□□ -0.76
VMP1-206ENST00000587945 MED6O75586 246 aa10.29□□□□□ -0.76
VMP1-206ENST00000587945 GATA2P23769 480 aaPredicted RBP10.29□□□□□ -0.76
VMP1-206ENST00000587945 PSMB3P49720 205 aa10.29□□□□□ -0.76
VMP1-206ENST00000587945 GGNBP1Q5YKI7 109 aa10.29□□□□□ -0.76
VMP1-206ENST00000587945 ZNF705AQ6ZN79 300 aaPredicted RBP10.29□□□□□ -0.76
VMP1-206ENST00000587945 TMEM182Q6ZP80 229 aaPredicted RBP10.29□□□□□ -0.76
VMP1-206ENST00000587945 FOXI2Q6ZQN5 318 aa10.29□□□□□ -0.76
VMP1-206ENST00000587945 ZNF709Q8N972 641 aa10.29□□□□□ -0.76
VMP1-206ENST00000587945 SLC35B3Q9H1N7 401 aa10.29□□□□□ -0.76
VMP1-206ENST00000587945 TMED3Q9Y3Q3 217 aa10.29□□□□□ -0.76
VMP1-206ENST00000587945 HECTD4Q9Y4D8 3996 aa10.28□□□□□ -0.76
VMP1-206ENST00000587945 DNAH2Q9P225 4427 aa10.28□□□□□ -0.76
VMP1-206ENST00000587945 ZNF705FA8MVS1 300 aaPredicted RBP10.28□□□□□ -0.76
VMP1-206ENST00000587945 PRSS46E5RG02 174 aa10.28□□□□□ -0.76
VMP1-206ENST00000587945 H3BP45 60 aa10.28□□□□□ -0.76
VMP1-206ENST00000587945 SYNGR2O43760 224 aa10.28□□□□□ -0.76
VMP1-206ENST00000587945 ZNF705DP0CH99 300 aaPredicted RBP10.28□□□□□ -0.76
VMP1-206ENST00000587945 ZNF705BP0CI00 300 aaPredicted RBP10.28□□□□□ -0.76
VMP1-206ENST00000587945 S100A5P33763 92 aa10.28□□□□□ -0.76
VMP1-206ENST00000587945 SPANXN5Q5MJ07 72 aa10.28□□□□□ -0.76
VMP1-206ENST00000587945 CCDC190Q86UF4 302 aa10.28□□□□□ -0.76
VMP1-206ENST00000587945 C20orf173Q96LM9 149 aa10.28□□□□□ -0.76
VMP1-206ENST00000587945 CIB3Q96Q77 187 aaPredicted RBP10.28□□□□□ -0.76
VMP1-206ENST00000587945 RNF126Q9BV68 326 aa10.28□□□□□ -0.76
VMP1-206ENST00000587945 SLC25A32Q9H2D1 315 aa10.28□□□□□ -0.76
VMP1-206ENST00000587945 SLC25A22Q9H936 323 aa10.28□□□□□ -0.76
VMP1-206ENST00000587945 ORM2P19652 201 aa10.27□□□□□ -0.77
VMP1-206ENST00000587945 RPP30P78346 268 aaKnown RBP10.27□□□□□ -0.77
VMP1-206ENST00000587945 FAM78BQ5VT40 261 aa10.27□□□□□ -0.77
VMP1-206ENST00000587945 C17orf77Q96MU5 243 aa10.27□□□□□ -0.77
VMP1-206ENST00000587945 NEU1Q99519 415 aa10.27□□□□□ -0.77
VMP1-206ENST00000587945 RSG1Q9BU20 258 aa10.27□□□□□ -0.77
VMP1-206ENST00000587945 ZNF98A6NK75 572 aa10.26□□□□□ -0.77
VMP1-206ENST00000587945 ISLRO14498 428 aa10.26□□□□□ -0.77
VMP1-206ENST00000587945 ADAP1O75689 374 aa10.26□□□□□ -0.77
VMP1-206ENST00000587945 AMBPP02760 352 aa10.26□□□□□ -0.77
VMP1-206ENST00000587945 PSG9Q00887 426 aa10.26□□□□□ -0.77
VMP1-206ENST00000587945 ACOT7LQ6ZUV0 252 aa10.26□□□□□ -0.77
VMP1-206ENST00000587945 C16orf92Q96LL3 132 aa10.26□□□□□ -0.77
VMP1-206ENST00000587945 PLA2G2EQ9NZK7 142 aa10.26□□□□□ -0.77
VMP1-206ENST00000587945 FLVCR2Q9UPI3 526 aa10.26□□□□□ -0.77
VMP1-206ENST00000587945 FAT2Q9NYQ8 4349 aa10.26□□□□□ -0.77
VMP1-206ENST00000587945 A0A0J9YX75 114 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 LINC00854A0A1B0GVQ3 168 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 C9orf170A2RU37 121 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 SPART-AS1P0CW21 52 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 GALR1P47211 349 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 POLR2GP62487 172 aaKnown RBP eCLIP10.25□□□□□ -0.77
VMP1-206ENST00000587945 AKR1C1Q04828 323 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 IGFL4Q6B9Z1 124 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 EBLN2Q6P2I7 272 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 C1orf158Q8N1D5 194 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 BPIFCQ8NFQ6 507 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 OR1B1Q8NGR6 318 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 DEDD2Q8WXF8 326 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 CLUHP3Q96NS8 147 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 SRRQ9GZT4 340 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 RBM38Q9H0Z9 239 aaKnown RBP10.25□□□□□ -0.77
VMP1-206ENST00000587945 DOK5Q9P104 306 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 STRAPQ9Y3F4 350 aaKnown RBP10.25□□□□□ -0.77
VMP1-206ENST00000587945 RFNGQ9Y644 331 aa10.25□□□□□ -0.77
VMP1-206ENST00000587945 SMCO3A2RU48 225 aa10.24□□□□□ -0.77
VMP1-206ENST00000587945 TMEM189A5PLL7 270 aa10.24□□□□□ -0.77
VMP1-206ENST00000587945 SMIM9A6NGZ8 99 aa10.24□□□□□ -0.77
VMP1-206ENST00000587945 CFDP00746 253 aaPredicted RBP10.24□□□□□ -0.77
VMP1-206ENST00000587945 PAX9P55771 341 aa10.24□□□□□ -0.77
VMP1-206ENST00000587945 ID3Q02535 119 aa10.24□□□□□ -0.77
VMP1-206ENST00000587945 BAK1Q16611 211 aa10.24□□□□□ -0.77
VMP1-206ENST00000587945 SPATA31B1PQ5VZV4 182 aa10.24□□□□□ -0.77
VMP1-206ENST00000587945 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.24□□□□□ -0.77
VMP1-206ENST00000587945 NDUFAF3Q9BU61 184 aa10.24□□□□□ -0.77
VMP1-206ENST00000587945 TMEM147Q9BVK8 224 aa10.24□□□□□ -0.77
VMP1-206ENST00000587945 RPRMQ9NS64 109 aa10.24□□□□□ -0.77
VMP1-206ENST00000587945 GOLT1BQ9Y3E0 138 aa10.24□□□□□ -0.77
VMP1-206ENST00000587945 DNAH17Q9UFH2 4485 aa10.24□□□□□ -0.77
VMP1-206ENST00000587945 NDUFB6O95139 128 aa10.23□□□□□ -0.77
VMP1-206ENST00000587945 MEOX2P50222 304 aa10.23□□□□□ -0.77
VMP1-206ENST00000587945 UBE2MP61081 183 aaKnown RBP10.23□□□□□ -0.77
VMP1-206ENST00000587945 SPANXN2Q5MJ10 180 aa10.23□□□□□ -0.77
VMP1-206ENST00000587945 FAM222AQ5U5X8 452 aa10.23□□□□□ -0.77
VMP1-206ENST00000587945 C7orf50Q9BRJ6 194 aaKnown RBP10.23□□□□□ -0.77
VMP1-206ENST00000587945 PSENENQ9NZ42 101 aa10.23□□□□□ -0.77
VMP1-206ENST00000587945 DKK2Q9UBU2 259 aa10.23□□□□□ -0.77
VMP1-206ENST00000587945 SLC45A2Q9UMX9 530 aa10.23□□□□□ -0.77
VMP1-206ENST00000587945 TRAV8-2A0A0B4J237 113 aa10.22□□□□□ -0.77
VMP1-206ENST00000587945 SSSCA1O60232 199 aa10.22□□□□□ -0.77
VMP1-206ENST00000587945 CCNKO75909 580 aa10.22□□□□□ -0.77
VMP1-206ENST00000587945 INPP1P49441 399 aa10.22□□□□□ -0.77
VMP1-206ENST00000587945 FGL1Q08830 312 aa10.22□□□□□ -0.77
VMP1-206ENST00000587945 SAMD13Q5VXD3 122 aa10.22□□□□□ -0.77
VMP1-206ENST00000587945 TRIQKQ629K1 86 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms