RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-208	ENST00000587263	PINX1	Q96BK5	328 aa	Known RBP	10.81	□□□□□ -0.68
RANBP3-208	ENST00000587263	C5orf30	Q96GV9	206 aa		10.81	□□□□□ -0.68
RANBP3-208	ENST00000587263	PBDC1	Q9BVG4	233 aa		10.81	□□□□□ -0.68
RANBP3-208	ENST00000587263	GGACT	Q9BVM4	153 aa		10.81	□□□□□ -0.68
RANBP3-208	ENST00000587263	SMIM3	Q9BZL3	60 aa		10.81	□□□□□ -0.68
RANBP3-208	ENST00000587263	MAGT1	Q9H0U3	335 aa		10.81	□□□□□ -0.68
RANBP3-208	ENST00000587263	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.81	□□□□□ -0.68
RANBP3-208	ENST00000587263	UFC1	Q9Y3C8	167 aa		10.81	□□□□□ -0.68
RANBP3-208	ENST00000587263	TIMM9	Q9Y5J7	89 aa		10.81	□□□□□ -0.68
RANBP3-208	ENST00000587263	OR4C46	A6NHA9	309 aa		10.8	□□□□□ -0.68
RANBP3-208	ENST00000587263	IGHV3-23	P01764	117 aa		10.8	□□□□□ -0.68
RANBP3-208	ENST00000587263	HBE1	P02100	147 aa		10.8	□□□□□ -0.68
RANBP3-208	ENST00000587263	MYOD1	P15172	320 aa		10.8	□□□□□ -0.68
RANBP3-208	ENST00000587263	CAMLG	P49069	296 aa		10.8	□□□□□ -0.68
RANBP3-208	ENST00000587263	SPCS3	P61009	180 aa		10.8	□□□□□ -0.68
RANBP3-208	ENST00000587263	ERVK-16	P61578	105 aa		10.8	□□□□□ -0.68
RANBP3-208	ENST00000587263	C10orf55	Q5SWW7	151 aa		10.8	□□□□□ -0.68
RANBP3-208	ENST00000587263	OSR1	Q8TAX0	266 aa	Predicted RBP	10.8	□□□□□ -0.68
RANBP3-208	ENST00000587263	SCGB1C1	Q8TD33	95 aa		10.8	□□□□□ -0.68
RANBP3-208	ENST00000587263	BSCL2	Q96G97	398 aa	Predicted RBP	10.8	□□□□□ -0.68
RANBP3-208	ENST00000587263	GPHA2	Q96T91	129 aa		10.8	□□□□□ -0.68
RANBP3-208	ENST00000587263	DYNC1H1	Q14204	4646 aa	Known RBP	10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	MARCH11	A6NNE9	402 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	NPIPB5	A8MRT5	1133 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	RTL8C	O15255	209 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	S1PR2	O95136	353 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	KRAS	P01116	189 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	ATP6V0C	P27449	155 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	UNQ9165/PRO28630	Q6UXU0	137 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263		Q6ZRG5	221 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	OR2G3	Q8NGZ4	309 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	OR11H2	Q8NH07	326 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	OR5B3	Q8NH48	314 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	CSTL1	Q9H114	145 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	HRH4	Q9H3N8	390 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	UQCC1	Q9NVA1	299 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263		S4R3C0	116 aa		10.79	□□□□□ -0.68
RANBP3-208	ENST00000587263	LINC00473	A8K010	186 aa		10.78	□□□□□ -0.68
RANBP3-208	ENST00000587263	HRAS	P01112	189 aa		10.78	□□□□□ -0.68
RANBP3-208	ENST00000587263	SAA1	P0DJI8	122 aa	Predicted RBP	10.78	□□□□□ -0.68
RANBP3-208	ENST00000587263	ADM	P35318	185 aa		10.78	□□□□□ -0.68
RANBP3-208	ENST00000587263	SNCA	P37840	140 aa		10.78	□□□□□ -0.68
RANBP3-208	ENST00000587263	VWC2	Q2TAL6	325 aa		10.78	□□□□□ -0.68
RANBP3-208	ENST00000587263	SUN5	Q8TC36	379 aa		10.78	□□□□□ -0.68
RANBP3-208	ENST00000587263	FANCD2OS	Q96PS1	177 aa		10.78	□□□□□ -0.68
RANBP3-208	ENST00000587263	RBKS	Q9H477	322 aa		10.78	□□□□□ -0.68
RANBP3-208	ENST00000587263	DNAH17	Q9UFH2	4485 aa		10.77	□□□□□ -0.68
RANBP3-208	ENST00000587263	TRBV7-1	A0A0A6YYK4	115 aa		10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	TEX22	C9J3V5	150 aa		10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	CST7	O76096	145 aa		10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	SNAPIN	O95295	136 aa		10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	MB	P02144	154 aa		10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	HIST1H1B	P16401	226 aa	Known RBP	10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	G6PC	P35575	357 aa		10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	CLINT1	Q14677	625 aa		10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	AKR1C8P	Q5T2L2	129 aa		10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	C19orf35	Q6ZS72	473 aa		10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	HSD17B11	Q8NBQ5	300 aa		10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	OR4A5	Q8NH83	315 aa		10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	DTD1	Q8TEA8	209 aa		10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	FKBP11	Q9NYL4	201 aa		10.77	□□□□□ -0.69
RANBP3-208	ENST00000587263	APOC3	P02656	99 aa		10.76	□□□□□ -0.69
RANBP3-208	ENST00000587263	CLEC3B	P05452	202 aa		10.76	□□□□□ -0.69
RANBP3-208	ENST00000587263	IL6R	P08887	468 aa	Predicted RBP	10.76	□□□□□ -0.69
RANBP3-208	ENST00000587263	TAGLN2	P37802	199 aa	Known RBP	10.76	□□□□□ -0.69
RANBP3-208	ENST00000587263	OR10P1	Q8NGE3	313 aa		10.76	□□□□□ -0.69
RANBP3-208	ENST00000587263	OR4A16	Q8NH70	328 aa		10.76	□□□□□ -0.69
RANBP3-208	ENST00000587263	MBD3L1	Q8WWY6	194 aa		10.76	□□□□□ -0.69
RANBP3-208	ENST00000587263	TMEM147	Q9BVK8	224 aa		10.76	□□□□□ -0.69
RANBP3-208	ENST00000587263	TREM1	Q9NP99	234 aa		10.76	□□□□□ -0.69
RANBP3-208	ENST00000587263	IGHV4-4	A0A075B6R2	117 aa		10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	FNDC10	F2Z333	226 aa		10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	DEFB4A	O15263	64 aa		10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	FCGR3B	O75015	233 aa		10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	MPDU1	O75352	247 aa		10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	CRYGC	P07315	174 aa		10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	H2AFB1	P0C5Y9	115 aa		10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	RPL27A	P46776	148 aa	Known RBP	10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	KLK9	Q2XQG4	91 aa		10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	SLC25A24	Q6NUK1	477 aa		10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	ZNF575	Q86XF7	245 aa		10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	OR10G4	Q8NGN3	311 aa		10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	NARS2	Q96I59	477 aa	Known RBP	10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	WDR61	Q9GZS3	305 aa	Known RBP	10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	KLK9	Q9UKQ9	250 aa		10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	PRND	Q9UKY0	176 aa		10.75	□□□□□ -0.69
RANBP3-208	ENST00000587263	TRAV10	A0A0B4J240	114 aa		10.74	□□□□□ -0.69
RANBP3-208	ENST00000587263	PMS2P5	A8MQ11	134 aa		10.74	□□□□□ -0.69
RANBP3-208	ENST00000587263		F8W036	122 aa		10.74	□□□□□ -0.69
RANBP3-208	ENST00000587263	DEFA4	P12838	97 aa		10.74	□□□□□ -0.69
RANBP3-208	ENST00000587263	GPR183	P32249	361 aa		10.74	□□□□□ -0.69
RANBP3-208	ENST00000587263	SLC38A11	Q08AI6	406 aa		10.74	□□□□□ -0.69
RANBP3-208	ENST00000587263	GUK1	Q16774	197 aa		10.74	□□□□□ -0.69
RANBP3-208	ENST00000587263	SPANXN5	Q5MJ07	72 aa		10.74	□□□□□ -0.69
RANBP3-208	ENST00000587263	PVRIG	Q6DKI7	326 aa		10.74	□□□□□ -0.69
RANBP3-208	ENST00000587263	APRG1	Q8IVJ8	170 aa		10.74	□□□□□ -0.69
RANBP3-208	ENST00000587263	TMEM190	Q8WZ59	177 aa		10.74	□□□□□ -0.69
RANBP3-208	ENST00000587263	SCRT1	Q9BWW7	348 aa		10.74	□□□□□ -0.69
RANBP3-208	ENST00000587263	DAZ1	Q9NQZ3	744 aa	Known RBP	10.74	□□□□□ -0.69
RANBP3-208	ENST00000587263	PKD1	P98161	4303 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms