RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 FAM74A3Q4VXF1 159 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 CTRB2Q6GPI1 263 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 LCNL1Q6ZST4 164 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 CYP2G1PQ6ZSU1 146 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 SLC35E3Q7Z769 313 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 STXBP6Q8NFX7 210 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 OR4X2Q8NGF9 303 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 ACY3Q96HD9 319 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 RITA1Q96K30 269 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 NKX6-2Q9C056 277 aaPredicted RBP6.08□□□□□ -1.44
VMP1-204ENST00000587259 TMEM167BQ9NRX6 74 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 U3KQK5 164 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 STAB2Q8WWQ8 2551 aa6.08□□□□□ -1.44
VMP1-204ENST00000587259 A0A1B0GV50 99 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 E7EUB6 86 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 F6UZH7 168 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 COX7A2P2O60397 106 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 CLN5O75503 358 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 OR5G3P0C626 314 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 AREGP15514 252 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 OR10J1P30954 320 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 NPBWR1P48145 328 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 RND2P52198 227 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 ICAM4Q14773 271 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 ZNF726P1Q15940 193 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 HAGHQ16775 308 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 DEFB136Q30KP8 78 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 MIC13Q5XKP0 118 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 TTC9CQ8N5M4 171 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 Q8N9W7 124 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 OR4X1Q8NH49 305 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 RBM14Q96PK6 669 aaKnown RBP6.07□□□□□ -1.44
VMP1-204ENST00000587259 NIPSNAP3BQ9BS92 247 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 SCRT1Q9BWW7 348 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 TMEM231Q9H6L2 316 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 VSIRQ9H7M9 311 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 TECRQ9NZ01 308 aaKnown RBP6.07□□□□□ -1.44
VMP1-204ENST00000587259 FUT9Q9Y231 359 aa6.07□□□□□ -1.44
VMP1-204ENST00000587259 PSMB11A5LHX3 300 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 LINC01548A6NM66 108 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 B4DEV8 164 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 YIF1AO95070 293 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 LINC00869P0C866 280 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 ADCYAP1P18509 176 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 CX3CL1P78423 397 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 SSBP2P81877 361 aaPredicted RBP6.06□□□□□ -1.44
VMP1-204ENST00000587259 SRSF3P84103 164 aaKnown RBP6.06□□□□□ -1.44
VMP1-204ENST00000587259 FAM78BQ5VT40 261 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 IQCF2Q8IXL9 164 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 KLHL30-AS1Q8NEE0 82 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 NPIPB3Q92617 1050 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 ATP6V0BQ99437 205 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 TXN2Q99757 166 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 TCEAL7Q9BRU2 100 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 RFNGQ9Y644 331 aa6.06□□□□□ -1.44
VMP1-204ENST00000587259 EPPK1P58107 5090 aaKnown RBP6.05□□□□□ -1.44
VMP1-204ENST00000587259 IGKV1OR2-108A0A075B7D4 117 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 I3L2K1 104 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 HMGB3O15347 200 aaKnown RBP6.05□□□□□ -1.44
VMP1-204ENST00000587259 REG1AP05451 166 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 SRP19P09132 144 aaKnown RBP6.05□□□□□ -1.44
VMP1-204ENST00000587259 ARL14EPLP0DKL9 152 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 C8orf88P0DMB2 117 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 FCGR2BP31994 310 aaPredicted RBP6.05□□□□□ -1.44
VMP1-204ENST00000587259 CRIP2P52943 208 aaPredicted RBP6.05□□□□□ -1.44
VMP1-204ENST00000587259 FGF8P55075 233 aaPredicted RBP6.05□□□□□ -1.44
VMP1-204ENST00000587259 MFAP4P55083 255 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 PLP1P60201 277 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 CCL20P78556 96 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 KLK9Q2XQG4 91 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 AKIRIN2Q53H80 203 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 FAM209BQ5JX69 171 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 C10orf113Q5VZT2 155 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 C5orf56Q8N8D9 126 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 CLRN3Q8NCR9 226 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 VN1R17PQ8TDU5 208 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 RXFP4Q8TDU9 374 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 DPF1Q92782 380 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 RAX2Q96IS3 184 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 UHRF2Q96PU4 802 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 FNDC4Q9H6D8 234 aaPredicted RBP6.05□□□□□ -1.44
VMP1-204ENST00000587259 DNAJC4Q9NNZ3 241 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 ZNF580Q9UK33 172 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 KLK9Q9UKQ9 250 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 RYR2Q92736 4967 aa6.05□□□□□ -1.44
VMP1-204ENST00000587259 IGLV11-55A0A075B6I3 123 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 IGHV7-81A0A0B4J1V7 117 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 C11orf94C9JXX5 98 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 H3BUA1 57 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 M0R036 132 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 FCN1O00602 326 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 GNG7O60262 68 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 OR7C2O60412 319 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 HYPMO75409 117 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 BRI3O95415 125 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 GCHFRP30047 84 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 YPEL3P61236 119 aaPredicted RBP6.04□□□□□ -1.44
VMP1-204ENST00000587259 CASC10Q5T4H9 136 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 SSX7Q7RTT5 188 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 CYB561D1Q8N8Q1 229 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms