RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 MYCNOSP40205 109 aa17.4■□□□□ 0.38
CIRBP-208ENST00000586548 OCC1Q8TAD7 63 aa17.4■□□□□ 0.38
CIRBP-208ENST00000586548 PSMG3-AS1Q96PY0 264 aa17.4■□□□□ 0.38
CIRBP-208ENST00000586548 DOPEY2Q9Y3R5 2298 aa17.4■□□□□ 0.38
CIRBP-208ENST00000586548 OR2T8A6NH00 312 aa17.39■□□□□ 0.37
CIRBP-208ENST00000586548 CTSGP08311 255 aa17.39■□□□□ 0.37
CIRBP-208ENST00000586548 ZNF600Q6ZNG1 722 aa17.39■□□□□ 0.37
CIRBP-208ENST00000586548 C1orf196B1AJZ1 125 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 PPP1R2P9O14990 202 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 IGF1P05019 195 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 CXCL1P09341 107 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 C9orf152Q5JTZ5 239 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 BLNKQ8WV28 456 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 Q96MF0 132 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 GAR1Q9NY12 217 aaKnown RBP17.38■□□□□ 0.37
CIRBP-208ENST00000586548 GCN1Q92616 2671 aaKnown RBP17.38■□□□□ 0.37
CIRBP-208ENST00000586548 TGIF2-C20orf24A0A0A6YYL0 155 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 MDFIC2A0A1B0GVS7 189 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 IGHG2P01859 326 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 HIST1H1EP10412 219 aaKnown RBP17.38■□□□□ 0.37
CIRBP-208ENST00000586548 RAB5BP61020 215 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 KRTAP1-3Q8IUG1 177 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 OR5B12Q96R08 314 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 AURKAIP1Q9NWT8 199 aaPredicted RBP17.38■□□□□ 0.37
CIRBP-208ENST00000586548 POLQO75417 2590 aa17.38■□□□□ 0.37
CIRBP-208ENST00000586548 FSHBP01225 129 aa17.37■□□□□ 0.37
CIRBP-208ENST00000586548 GNG4P50150 75 aa17.37■□□□□ 0.37
CIRBP-208ENST00000586548 RANP62826 216 aaKnown RBP17.37■□□□□ 0.37
CIRBP-208ENST00000586548 USF2Q15853 346 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-208ENST00000586548 CENPWQ5EE01 88 aa17.37■□□□□ 0.37
CIRBP-208ENST00000586548 SFRP2Q96HF1 295 aa17.37■□□□□ 0.37
CIRBP-208ENST00000586548 CENPEQ02224 2701 aa17.36■□□□□ 0.37
CIRBP-208ENST00000586548 TRBV24-1A0A075B6N3 115 aa17.36■□□□□ 0.37
CIRBP-208ENST00000586548 S100PP25815 95 aa17.36■□□□□ 0.37
CIRBP-208ENST00000586548 GALR1P47211 349 aa17.36■□□□□ 0.37
CIRBP-208ENST00000586548 DEFB112Q30KQ8 113 aa17.36■□□□□ 0.37
CIRBP-208ENST00000586548 BPIFA4PQ86YQ2 179 aa17.36■□□□□ 0.37
CIRBP-208ENST00000586548 EEF1AKMT3Q96AZ1 226 aa17.36■□□□□ 0.37
CIRBP-208ENST00000586548 CHRDL1Q9BU40 450 aa17.36■□□□□ 0.37
CIRBP-208ENST00000586548 RNF24Q9Y225 148 aa17.36■□□□□ 0.37
CIRBP-208ENST00000586548 SVEP1Q4LDE5 3571 aa17.36■□□□□ 0.37
CIRBP-208ENST00000586548 PEX7O00628 323 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 PFN1P07737 140 aaKnown RBP17.35■□□□□ 0.37
CIRBP-208ENST00000586548 ADMP35318 185 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 TAS2R60P59551 318 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 C1QL4Q86Z23 238 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 TRBV7-1A0A0A6YYK4 115 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 FAM223BA6NKX1 122 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 K7EN84 100 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 SNRPCP09234 159 aaKnown RBP17.35■□□□□ 0.37
CIRBP-208ENST00000586548 GPR183P32249 361 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 CNN1P51911 297 aaKnown RBP17.35■□□□□ 0.37
CIRBP-208ENST00000586548 TEX38Q6PEX7 206 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 FAM223AQ8IWN6 122 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 TMEM190Q8WZ59 177 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 FAM210BQ96KR6 192 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 IGF2BP2-AS1Q96M15 143 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 ATP6V0BQ99437 205 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 CDC42EP3Q9UKI2 254 aa17.35■□□□□ 0.37
CIRBP-208ENST00000586548 PGPA6NDG6 321 aa17.34■□□□□ 0.37
CIRBP-208ENST00000586548 ZNF98A6NK75 572 aa17.34■□□□□ 0.37
CIRBP-208ENST00000586548 SLC25A5P05141 298 aaKnown RBP17.34■□□□□ 0.37
CIRBP-208ENST00000586548 HNF1AP20823 631 aa17.34■□□□□ 0.37
CIRBP-208ENST00000586548 SRP14P37108 136 aaKnown RBP17.34■□□□□ 0.37
CIRBP-208ENST00000586548 RPS10P46783 165 aaKnown RBP17.34■□□□□ 0.37
CIRBP-208ENST00000586548 BCL6BQ8N143 479 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-208ENST00000586548 CCDC140Q96MF4 163 aa17.34■□□□□ 0.37
CIRBP-208ENST00000586548 MS4A10Q96PG2 267 aa17.34■□□□□ 0.37
CIRBP-208ENST00000586548 ZNF586Q9NXT0 402 aa17.34■□□□□ 0.37
CIRBP-208ENST00000586548 EPDR1Q9UM22 224 aa17.34■□□□□ 0.37
CIRBP-208ENST00000586548 NAV2Q8IVL1 2488 aa17.34■□□□□ 0.37
CIRBP-208ENST00000586548 PRRC2AP48634 2157 aaKnown RBP17.34■□□□□ 0.37
CIRBP-208ENST00000586548 BRI3O95415 125 aa17.33■□□□□ 0.37
CIRBP-208ENST00000586548 C9orf139Q6ZV77 190 aa17.33■□□□□ 0.37
CIRBP-208ENST00000586548 C5orf17Q8NAS9 161 aa17.33■□□□□ 0.37
CIRBP-208ENST00000586548 OR4F17Q8NGA8 305 aa17.33■□□□□ 0.37
CIRBP-208ENST00000586548 Q9H3A6 140 aa17.33■□□□□ 0.37
CIRBP-208ENST00000586548 CSMD2Q7Z408 3487 aa17.33■□□□□ 0.36
CIRBP-208ENST00000586548 H3BUA1 57 aa17.33■□□□□ 0.36
CIRBP-208ENST00000586548 ATP5G2Q06055 141 aa17.33■□□□□ 0.36
CIRBP-208ENST00000586548 ZFP82Q8N141 532 aa17.33■□□□□ 0.36
CIRBP-208ENST00000586548 IMMP2LQ96T52 175 aa17.33■□□□□ 0.36
CIRBP-208ENST00000586548 PYGO2Q9BRQ0 406 aa17.33■□□□□ 0.36
CIRBP-208ENST00000586548 OTORQ9NRC9 128 aa17.33■□□□□ 0.36
CIRBP-208ENST00000586548 LINC00527Q9UJ94 153 aa17.33■□□□□ 0.36
CIRBP-208ENST00000586548 MAP1AP78559 2803 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-208ENST00000586548 ABCA12Q86UK0 2595 aa17.32■□□□□ 0.36
CIRBP-208ENST00000586548 MRPS12O15235 138 aaKnown RBP17.32■□□□□ 0.36
CIRBP-208ENST00000586548 CLEC3BP05452 202 aa17.32■□□□□ 0.36
CIRBP-208ENST00000586548 IGLC2P0DOY2 106 aa17.32■□□□□ 0.36
CIRBP-208ENST00000586548 S100A7P31151 101 aa17.32■□□□□ 0.36
CIRBP-208ENST00000586548 CYB5R2Q6BCY4 276 aa17.32■□□□□ 0.36
CIRBP-208ENST00000586548 OR10G8Q8NGN5 311 aa17.32■□□□□ 0.36
CIRBP-208ENST00000586548 TGOLN2O43493 480 aa17.31■□□□□ 0.36
CIRBP-208ENST00000586548 IGHV4-59P01825 116 aa17.31■□□□□ 0.36
CIRBP-208ENST00000586548 BLCAPP62952 87 aa17.31■□□□□ 0.36
CIRBP-208ENST00000586548 HIST2H2BCQ6DN03 193 aa17.31■□□□□ 0.36
CIRBP-208ENST00000586548 KCNIP4Q6PIL6 250 aa17.31■□□□□ 0.36
CIRBP-208ENST00000586548 RABAC1Q9UI14 185 aa17.31■□□□□ 0.36
CIRBP-208ENST00000586548 TRBV19A0A075B6N1 114 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms