RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 TIGITQ495A1 244 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 PVRIGQ6DKI7 326 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 CSNK1G2-AS1Q8NCQ2 148 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 DTD1Q8TEA8 209 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 RBKSQ9H477 322 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 HEYLQ9NQ87 328 aaPredicted RBP8.39□□□□□ -1.07
LIG3-207ENST00000586119 U3KQ87 197 aa8.39□□□□□ -1.07
LIG3-207ENST00000586119 PKD1P98161 4303 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 TRAV2A0A0B4J234 112 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 ZNF705EA8MWA4 302 aaPredicted RBP8.38□□□□□ -1.07
LIG3-207ENST00000586119 FAM25EA8MYX2 175 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 C11orf94C9JXX5 98 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 M0R2N4 97 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 WRBO00258 174 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 CCSO14618 274 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 GOSR2O14653 212 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 P2RY1P47900 373 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 TCTAP57738 103 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 IL15RAQ13261 267 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 C12orf74Q32Q52 190 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 C2orf83Q53S99 150 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 ACTL10Q5JWF8 245 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 DCANP1Q8TF63 244 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 ASB13Q8WXK3 278 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 RAB40CQ96S21 281 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 NMES1Q9C002 83 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 MED28Q9H204 178 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 HRH4Q9H3N8 390 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 GSKIPQ9P0R6 139 aa8.38□□□□□ -1.07
LIG3-207ENST00000586119 TRAV10A0A0B4J240 114 aa8.37□□□□□ -1.07
LIG3-207ENST00000586119 CLN5O75503 358 aa8.37□□□□□ -1.07
LIG3-207ENST00000586119 IGKV1-17P01599 117 aa8.37□□□□□ -1.07
LIG3-207ENST00000586119 CRYBB3P26998 211 aa8.37□□□□□ -1.07
LIG3-207ENST00000586119 TAS2R30P59541 319 aa8.37□□□□□ -1.07
LIG3-207ENST00000586119 SLC24A4Q8NFF2 622 aa8.37□□□□□ -1.07
LIG3-207ENST00000586119 SMIM8Q96KF7 97 aa8.37□□□□□ -1.07
LIG3-207ENST00000586119 MGAT4CQ9UBM8 478 aa8.37□□□□□ -1.07
LIG3-207ENST00000586119 RGS13O14921 159 aa8.36□□□□□ -1.07
LIG3-207ENST00000586119 RTL8CO15255 209 aa8.36□□□□□ -1.07
LIG3-207ENST00000586119 NXPH3O95157 252 aa8.36□□□□□ -1.07
LIG3-207ENST00000586119 MBPP02686 304 aaPredicted RBP8.36□□□□□ -1.07
LIG3-207ENST00000586119 CD5P06127 495 aa8.36□□□□□ -1.07
LIG3-207ENST00000586119 MIFP14174 115 aa8.36□□□□□ -1.07
LIG3-207ENST00000586119 PVALBP20472 110 aaPredicted RBP8.36□□□□□ -1.07
LIG3-207ENST00000586119 NPY1RP25929 384 aa8.36□□□□□ -1.07
LIG3-207ENST00000586119 DEFB1P60022 68 aa8.36□□□□□ -1.07
LIG3-207ENST00000586119 RRAS2P62070 204 aaPredicted RBP8.36□□□□□ -1.07
LIG3-207ENST00000586119 POLR2GP62487 172 aaKnown RBP eCLIP8.36□□□□□ -1.07
LIG3-207ENST00000586119 RAB11AP62491 216 aa8.36□□□□□ -1.07
LIG3-207ENST00000586119 RNASEH2CQ8TDP1 164 aaKnown RBP8.36□□□□□ -1.07
LIG3-207ENST00000586119 METTL26Q96S19 204 aa8.36□□□□□ -1.07
LIG3-207ENST00000586119 U3KQE9 123 aa8.36□□□□□ -1.07
LIG3-207ENST00000586119 ABCA13Q86UQ4 5058 aa8.36□□□□□ -1.07
LIG3-207ENST00000586119 DEFB131BA0A096LNP1 70 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 RPS10-NUDT3A0A1W2PQS6 291 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 A0A1W2PS18 150 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 TSC22D2O75157 780 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 SCGB1D2O95969 90 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 IFNA10P01566 189 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 RLN2P04090 185 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 SPP1P10451 314 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 OPRK1P41145 380 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 H2BFSP57053 126 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 PSMG4Q5JS54 123 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 MORN3Q6PF18 240 aaPredicted RBP8.35□□□□□ -1.07
LIG3-207ENST00000586119 OR4X1Q8NH49 305 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 GRAMD2BQ96HH9 432 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 MAGT1Q9H0U3 335 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 PLA2G2EQ9NZK7 142 aa8.35□□□□□ -1.07
LIG3-207ENST00000586119 K7EPK0 472 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 L7N2F9 121 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 SIX6O95475 246 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 PET100P0DJ07 73 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 IAPPP10997 89 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 VAMP2P63027 116 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 FCN2Q15485 313 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 ETFRF1Q6IPR1 90 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 C16orf54Q6UWD8 224 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 GLMPQ8WWB7 406 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 RNF126Q9BV68 326 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 KRTAP4-5Q9BYR2 181 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 TMEM231Q9H6L2 316 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 PSENENQ9NZ42 101 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 XCL2Q9UBD3 114 aa8.34□□□□□ -1.07
LIG3-207ENST00000586119 RCL1Q9Y2P8 373 aaKnown RBP8.34□□□□□ -1.07
LIG3-207ENST00000586119 STRAPQ9Y3F4 350 aaKnown RBP8.34□□□□□ -1.07
LIG3-207ENST00000586119 PRSS29PA6NIE9 313 aa8.33□□□□□ -1.08
LIG3-207ENST00000586119 SSSCA1O60232 199 aa8.33□□□□□ -1.08
LIG3-207ENST00000586119 GIPP09681 153 aaPredicted RBP8.33□□□□□ -1.08
LIG3-207ENST00000586119 SLC25A4P12235 298 aa8.33□□□□□ -1.08
LIG3-207ENST00000586119 CXCL3P19876 107 aa8.33□□□□□ -1.08
LIG3-207ENST00000586119 GPX4P36969 197 aaPredicted RBP8.33□□□□□ -1.08
LIG3-207ENST00000586119 PAX9P55771 341 aa8.33□□□□□ -1.08
LIG3-207ENST00000586119 FXYD7P58549 80 aa8.33□□□□□ -1.08
LIG3-207ENST00000586119 S100A10P60903 97 aa8.33□□□□□ -1.08
LIG3-207ENST00000586119 RAB32Q13637 225 aa8.33□□□□□ -1.08
LIG3-207ENST00000586119 USF2Q15853 346 aaPredicted RBP8.33□□□□□ -1.08
LIG3-207ENST00000586119 PRSS54Q6PEW0 395 aa8.33□□□□□ -1.08
LIG3-207ENST00000586119 LINC00336Q6ZUF6 198 aa8.33□□□□□ -1.08
LIG3-207ENST00000586119 POM121L12Q8N7R1 296 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms