RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PMCHL1Q16048 86 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 CT83Q5H943 113 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 KLHDC1Q8N7A1 406 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 C19orf71A6NCJ1 209 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 M0R2Z0 102 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 TCRAP04437 139 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 APELAP0DMC3 54 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 CNTFRP26992 372 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 HBBP68871 147 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 MMDQ15546 238 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 TCF24Q7RTU0 167 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 ZNF492Q9P255 531 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 SIGLEC9Q9Y336 463 aa11.34□□□□□ -0.59
CDK5RAP3-237ENST00000585163 KALRNO60229 2985 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 A8MWL6 223 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 MAP1BP46821 2468 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 LCN12Q6JVE5 192 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 EBLN2Q6P2I7 272 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 ZGRF1Q86YA3 2104 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 OR8B3Q8NGG8 313 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 OR2D3Q8NGH3 330 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 OR8B2Q96RD0 313 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 TXN2Q99757 166 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 Q9H3A6 140 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 DYNLRB1Q9NP97 96 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 PKDREJQ9NTG1 2253 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 IGHV3-21A0A0B4J1V1 117 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 IGLV1-47P01700 117 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 RNASEKQ6P5S7 137 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 Q6ZN92 141 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 PRSS33Q8NF86 280 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 GTSF1Q8WW33 167 aa11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 SOX21Q9Y651 276 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-237ENST00000585163 IGHV2-26A0A0B4J1V2 119 aa11.32□□□□□ -0.6
CDK5RAP3-237ENST00000585163 C2orf70A6NJV1 201 aa11.32□□□□□ -0.6
CDK5RAP3-237ENST00000585163 SHISA9B4DS77 424 aa11.32□□□□□ -0.6
CDK5RAP3-237ENST00000585163 P01737 135 aa11.32□□□□□ -0.6
CDK5RAP3-237ENST00000585163 LEMD1Q68G75 181 aa11.32□□□□□ -0.6
CDK5RAP3-237ENST00000585163 ATOH7Q8N100 152 aa11.32□□□□□ -0.6
CDK5RAP3-237ENST00000585163 WFDC12Q8WWY7 111 aa11.32□□□□□ -0.6
CDK5RAP3-237ENST00000585163 F11RQ9Y624 299 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-237ENST00000585163 E7EQL1 145 aa11.32□□□□□ -0.6
CDK5RAP3-237ENST00000585163 PPP1R27Q86WC6 154 aa11.32□□□□□ -0.6
CDK5RAP3-237ENST00000585163 URB1-AS1Q96HZ7 61 aa11.32□□□□□ -0.6
CDK5RAP3-237ENST00000585163 GFRA4Q9GZZ7 299 aa11.32□□□□□ -0.6
CDK5RAP3-237ENST00000585163 ATMQ13315 3056 aa11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 AKAP13Q12802 2813 aa11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 IGHV1-3A0A0C4DH29 117 aa11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 IGHV1-69-2A0A0G2JMI3 117 aa11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 TEX22C9J3V5 150 aa11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 H3BTX0 84 aa11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 TFPI2P48307 235 aa11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 HNRNPA3P51991 378 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 RNASE8Q8TDE3 154 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 HIGD1AQ9Y241 93 aa11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 LAMTOR2Q9Y2Q5 125 aa11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 INSIG2Q9Y5U4 225 aa11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 DMXL2Q8TDJ6 3036 aa11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 DLX1P56177 255 aa11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 RALYQ9UKM9 306 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-237ENST00000585163 TRAV9-2A0A087WT02 112 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 SERTM2A0A1B0GWG4 89 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 IGLC1P0CG04 106 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 PSG1P11464 419 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 FAM162BQ5T6X4 162 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 ABHD17AQ96GS6 310 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 NGBQ9NPG2 151 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 ZFP30Q9Y2G7 519 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 PCNX1Q96RV3 2341 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 ZNF318Q5VUA4 2279 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 MALRD1Q5VYJ5 2156 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 FAM231BA6NCW3 169 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 NPIPB6E9PJ23 425 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 BUB1B-PAK6H3BSN5 160 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 Q56UQ5 140 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 GFRALQ6UXV0 394 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 RBPMS2Q6ZRY4 209 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 STPG4Q8N801 248 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 DAZAP1Q96EP5 407 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 PGLYRP4Q96LB8 373 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 OTORQ9NRC9 128 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 TMEM14CQ9P0S9 112 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 ZNF835Q9Y2P0 537 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 ZNF292O60281 2723 aa11.3□□□□□ -0.6
CDK5RAP3-237ENST00000585163 C20orf202A1L168 122 aa11.29□□□□□ -0.6
CDK5RAP3-237ENST00000585163 TSPOP30536 169 aa11.29□□□□□ -0.6
CDK5RAP3-237ENST00000585163 Q8NA96 180 aa11.29□□□□□ -0.6
CDK5RAP3-237ENST00000585163 DCHS1Q96JQ0 3298 aa11.29□□□□□ -0.6
CDK5RAP3-237ENST00000585163 LYZP61626 148 aa11.29□□□□□ -0.6
CDK5RAP3-237ENST00000585163 ODF1Q14990 250 aa11.29□□□□□ -0.6
CDK5RAP3-237ENST00000585163 PRR31Q5SQ13 230 aa11.29□□□□□ -0.6
CDK5RAP3-237ENST00000585163 Q86TA4 180 aa11.29□□□□□ -0.6
CDK5RAP3-237ENST00000585163 SLC25A39Q9BZJ4 359 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-237ENST00000585163 MRPS16Q9Y3D3 137 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-237ENST00000585163 ANKRD11Q6UB99 2663 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-237ENST00000585163 I3L2K1 104 aa11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 IGLV2-11P01706 119 aa11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 FOXA3P55318 350 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 PRB3Q04118 309 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-237ENST00000585163 RBPJQ06330 500 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms