RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 C15orf61A6NNL5 157 aa13.03□□□□□ -0.32
TOP3A-220ENST00000585031 PITX3O75364 302 aa13.03□□□□□ -0.32
TOP3A-220ENST00000585031 MED6O75586 246 aa13.03□□□□□ -0.32
TOP3A-220ENST00000585031 RAB14P61106 215 aa13.03□□□□□ -0.32
TOP3A-220ENST00000585031 ID3Q02535 119 aa13.03□□□□□ -0.32
TOP3A-220ENST00000585031 LEMD1Q68G75 181 aa13.03□□□□□ -0.32
TOP3A-220ENST00000585031 H2BFWTQ7Z2G1 175 aa13.03□□□□□ -0.32
TOP3A-220ENST00000585031 FAM24BQ8N5W8 94 aa13.03□□□□□ -0.32
TOP3A-220ENST00000585031 BSCL2Q96G97 398 aaPredicted RBP13.03□□□□□ -0.32
TOP3A-220ENST00000585031 SLC25A31Q9H0C2 315 aa13.03□□□□□ -0.32
TOP3A-220ENST00000585031 CACFD1Q9UGQ2 172 aa13.03□□□□□ -0.32
TOP3A-220ENST00000585031 A0A0G2JRQ6 117 aa13.02□□□□□ -0.33
TOP3A-220ENST00000585031 KRASP01116 189 aa13.02□□□□□ -0.33
TOP3A-220ENST00000585031 AMBPP02760 352 aa13.02□□□□□ -0.33
TOP3A-220ENST00000585031 POLR2GP62487 172 aaKnown RBP eCLIP13.02□□□□□ -0.33
TOP3A-220ENST00000585031 C12orf74Q32Q52 190 aa13.02□□□□□ -0.33
TOP3A-220ENST00000585031 LILRB2Q8N423 598 aa13.02□□□□□ -0.33
TOP3A-220ENST00000585031 RAB40CQ96S21 281 aa13.02□□□□□ -0.33
TOP3A-220ENST00000585031 BET1LQ9NYM9 111 aa13.02□□□□□ -0.33
TOP3A-220ENST00000585031 C15orf62A8K5M9 175 aa13.01□□□□□ -0.33
TOP3A-220ENST00000585031 SSSCA1O60232 199 aa13.01□□□□□ -0.33
TOP3A-220ENST00000585031 CTSGP08311 255 aa13.01□□□□□ -0.33
TOP3A-220ENST00000585031 TPT1P13693 172 aaKnown RBP13.01□□□□□ -0.33
TOP3A-220ENST00000585031 NQO2P16083 231 aa13.01□□□□□ -0.33
TOP3A-220ENST00000585031 G6PCP35575 357 aa13.01□□□□□ -0.33
TOP3A-220ENST00000585031 WT1-ASQ06250 92 aa13.01□□□□□ -0.33
TOP3A-220ENST00000585031 TMEM116Q8NCL8 245 aa13.01□□□□□ -0.33
TOP3A-220ENST00000585031 DMBX1Q8NFW5 382 aa13.01□□□□□ -0.33
TOP3A-220ENST00000585031 SCARB1Q8WTV0 552 aa13.01□□□□□ -0.33
TOP3A-220ENST00000585031 ST8SIA2Q92186 375 aa13.01□□□□□ -0.33
TOP3A-220ENST00000585031 PHYHIPLQ96FC7 376 aa13.01□□□□□ -0.33
TOP3A-220ENST00000585031 AIFM2Q9BRQ8 373 aa13.01□□□□□ -0.33
TOP3A-220ENST00000585031 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.01□□□□□ -0.33
TOP3A-220ENST00000585031 DMBT1Q9UGM3 2413 aaPredicted RBP13.01□□□□□ -0.33
TOP3A-220ENST00000585031 DEFB131BA0A096LNP1 70 aa13□□□□□ -0.33
TOP3A-220ENST00000585031 MARCH11A6NNE9 402 aa13□□□□□ -0.33
TOP3A-220ENST00000585031 UPK2O00526 184 aa13□□□□□ -0.33
TOP3A-220ENST00000585031 P0C879 139 aa13□□□□□ -0.33
TOP3A-220ENST00000585031 HTR2BP41595 481 aa13□□□□□ -0.33
TOP3A-220ENST00000585031 CMC4P56277 68 aaPredicted RBP13□□□□□ -0.33
TOP3A-220ENST00000585031 DEFB131AP59861 70 aa13□□□□□ -0.33
TOP3A-220ENST00000585031 SLC25A24Q6NUK1 477 aa13□□□□□ -0.33
TOP3A-220ENST00000585031 SPSB3Q6PJ21 355 aa13□□□□□ -0.33
TOP3A-220ENST00000585031 STOML3Q8TAV4 291 aa13□□□□□ -0.33
TOP3A-220ENST00000585031 MAGT1Q9H0U3 335 aa13□□□□□ -0.33
TOP3A-220ENST00000585031 BORCS7-ASMTA0A0B4J1R7 106 aa12.99□□□□□ -0.33
TOP3A-220ENST00000585031 ZNF705EA8MWA4 302 aaPredicted RBP12.99□□□□□ -0.33
TOP3A-220ENST00000585031 K7EIM0 57 aa12.99□□□□□ -0.33
TOP3A-220ENST00000585031 SYNGR2O43760 224 aa12.99□□□□□ -0.33
TOP3A-220ENST00000585031 CFDP00746 253 aaPredicted RBP12.99□□□□□ -0.33
TOP3A-220ENST00000585031 HRASP01112 189 aa12.99□□□□□ -0.33
TOP3A-220ENST00000585031 CAV2P51636 162 aa12.99□□□□□ -0.33
TOP3A-220ENST00000585031 TAS2R30P59541 319 aa12.99□□□□□ -0.33
TOP3A-220ENST00000585031 C11orf1Q9H5F2 150 aa12.99□□□□□ -0.33
TOP3A-220ENST00000585031 LYRM2Q9NU23 88 aaPredicted RBP12.99□□□□□ -0.33
TOP3A-220ENST00000585031 C21orf62Q9NYP8 219 aa12.99□□□□□ -0.33
TOP3A-220ENST00000585031 THYN1Q9P016 225 aa12.99□□□□□ -0.33
TOP3A-220ENST00000585031 FAT1Q14517 4588 aa12.98□□□□□ -0.33
TOP3A-220ENST00000585031 APOHP02749 345 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-220ENST00000585031 OR13C7P0DN81 318 aa12.98□□□□□ -0.33
TOP3A-220ENST00000585031 MIFP14174 115 aa12.98□□□□□ -0.33
TOP3A-220ENST00000585031 BAXQ07812 192 aa12.98□□□□□ -0.33
TOP3A-220ENST00000585031 IZUMO4Q1ZYL8 232 aa12.98□□□□□ -0.33
TOP3A-220ENST00000585031 EIF5AL1Q6IS14 154 aaKnown RBP12.98□□□□□ -0.33
TOP3A-220ENST00000585031 Q6ZRM9 215 aa12.98□□□□□ -0.33
TOP3A-220ENST00000585031 UBAC2Q8NBM4 344 aa12.98□□□□□ -0.33
TOP3A-220ENST00000585031 C16orf90A8MZG2 172 aa12.97□□□□□ -0.33
TOP3A-220ENST00000585031 ATP6V1G1O75348 118 aa12.97□□□□□ -0.33
TOP3A-220ENST00000585031 NXPH3O95157 252 aa12.97□□□□□ -0.33
TOP3A-220ENST00000585031 CLLU1Q5K131 121 aa12.97□□□□□ -0.33
TOP3A-220ENST00000585031 ALKAL2Q6UX46 152 aa12.97□□□□□ -0.33
TOP3A-220ENST00000585031 TCF24Q7RTU0 167 aa12.97□□□□□ -0.33
TOP3A-220ENST00000585031 STX12Q86Y82 276 aa12.97□□□□□ -0.33
TOP3A-220ENST00000585031 BAP18Q8IXM2 172 aa12.97□□□□□ -0.33
TOP3A-220ENST00000585031 OR4A16Q8NH70 328 aa12.97□□□□□ -0.33
TOP3A-220ENST00000585031 SMIM8Q96KF7 97 aa12.97□□□□□ -0.33
TOP3A-220ENST00000585031 CIB3Q96Q77 187 aaPredicted RBP12.97□□□□□ -0.33
TOP3A-220ENST00000585031 QTRT1Q9BXR0 403 aaKnown RBP12.97□□□□□ -0.33
TOP3A-220ENST00000585031 SCRT2Q9NQ03 307 aa12.97□□□□□ -0.33
TOP3A-220ENST00000585031 CLEC5AQ9NY25 188 aa12.97□□□□□ -0.33
TOP3A-220ENST00000585031 HSPB7Q9UBY9 170 aa12.97□□□□□ -0.33
TOP3A-220ENST00000585031 TEX50A0A1B0GTY4 177 aa12.96□□□□□ -0.33
TOP3A-220ENST00000585031 NUPL2O15504 423 aaKnown RBP12.96□□□□□ -0.33
TOP3A-220ENST00000585031 POU2AF1Q16633 256 aa12.96□□□□□ -0.33
TOP3A-220ENST00000585031 SOHLH1Q5JUK2 328 aa12.96□□□□□ -0.33
TOP3A-220ENST00000585031 TRPT1Q86TN4 253 aaKnown RBP12.96□□□□□ -0.33
TOP3A-220ENST00000585031 CSNK1G2-AS1Q8NCQ2 148 aa12.96□□□□□ -0.33
TOP3A-220ENST00000585031 SRSF8Q9BRL6 282 aaKnown RBP12.96□□□□□ -0.33
TOP3A-220ENST00000585031 NDUFAF3Q9BU61 184 aa12.96□□□□□ -0.33
TOP3A-220ENST00000585031 MS4A6AQ9H2W1 248 aa12.96□□□□□ -0.33
TOP3A-220ENST00000585031 CYTL1Q9NRR1 136 aa12.96□□□□□ -0.33
TOP3A-220ENST00000585031 FAM24AA6NFZ4 105 aa12.95□□□□□ -0.34
TOP3A-220ENST00000585031 TNP2Q05952 138 aa12.95□□□□□ -0.34
TOP3A-220ENST00000585031 Q56UQ5 140 aa12.95□□□□□ -0.34
TOP3A-220ENST00000585031 TMEM252Q8N6L7 170 aa12.95□□□□□ -0.34
TOP3A-220ENST00000585031 LRRC20Q8TCA0 184 aa12.95□□□□□ -0.34
TOP3A-220ENST00000585031 ATP6V0BQ99437 205 aa12.95□□□□□ -0.34
TOP3A-220ENST00000585031 COMMD5Q9GZQ3 224 aa12.95□□□□□ -0.34
TOP3A-220ENST00000585031 SLC25A32Q9H2D1 315 aa12.95□□□□□ -0.34
TOP3A-220ENST00000585031 TMEM140Q9NV12 185 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms