RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TMEM183AQ8IXX5 376 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 OR5H2Q8NGV7 314 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 OR10X1Q8NGY0 326 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 COQ8AQ8NI60 647 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 ENKURQ8TC29 256 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 RNASEH2CQ8TDP1 164 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 PYDC1Q8WXC3 89 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 CCL17Q92583 94 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 YIPF5Q969M3 257 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC25A46Q96AG3 418 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 YIPF6Q96EC8 236 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 SMIM12Q96EX1 92 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 PGLYRP3Q96LB9 341 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 BPESC1Q9GZL8 116 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 NXF2Q9GZY0 626 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 ENY2Q9NPA8 101 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 ANXA10Q9UJ72 324 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 TRBV6-7A0A0A0MS04 114 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 K7EN84 100 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 M0R036 132 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 M0R129 80 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 GPR31O00270 319 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 SOX14O95416 240 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 CDS2O95674 445 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 IFNA21P01568 189 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 HLA-DQB1P01920 261 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 CHTF8P0CG12 524 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 AKAIN1P0CW23 69 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 S100A2P29034 98 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 BTCP35070 178 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 GPX4P36969 197 aaPredicted RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 NMUP48645 174 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 FGF8P55075 233 aaPredicted RBP1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 DLX6P56179 175 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF846Q147U1 533 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 LAMTOR1Q6IAA8 161 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 FAM131AQ6UXB0 335 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC25A26Q70HW3 274 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 TRAPPC6BQ86SZ2 158 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF429Q86V71 674 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 OR5AS1Q8N127 324 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 BPIFB6Q8NFQ5 453 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 GRPEL2Q8TAA5 225 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 TMEM167AQ8TBQ9 72 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 NEK7Q8TDX7 302 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 C20orf144Q9BQM9 153 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 GINS4Q9BRT9 223 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 FAAP24Q9BTP7 215 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 ARV1Q9H2C2 271 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF581Q9P0T4 197 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 XCL2Q9UBD3 114 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 MTFP1Q9UDX5 166 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 CLEC2DQ9UHP7 191 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 PRELID1Q9Y255 219 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 UFC1Q9Y3C8 167 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 KNTC1P50748 2209 aa1.42□□□□□ -2.18
SMCHD1-211ENST00000584897 ATRQ13535 2644 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 MEX3AA1L020 520 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 BUB1B-PAK6H3BSN5 160 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 SDCBPO00560 298 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 MFNGO00587 321 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 PEX7O00628 323 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 NDUFS5O43920 106 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 RPP14O95059 124 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 YIF1AO95070 293 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 OR2H2O95918 312 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 IGLV1-47P01700 117 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 IGHG2P01859 326 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 CD74P04233 296 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 HSPB1P04792 205 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 IL5P05113 134 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 TRAPPC2P0DI81 140 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 TRAPPC2BP0DI82 140 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 SPNP16150 400 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 HLA-GP17693 338 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 NFYAP23511 347 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 GABRA2P47869 451 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 CCR6P51684 374 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 ERHP84090 104 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 HOXC5Q00444 222 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 MPPED2Q15777 294 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 C1orf194Q5T5A4 169 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 VMO1Q7Z5L0 202 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 SGPP2Q8IWX5 399 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 C11orf53Q8IXP5 236 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 C10orf111Q8N326 155 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 Q8N377 158 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 Q8N7P7 452 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 SUMF2Q8NBJ7 301 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 RGP1Q92546 391 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 GALNT14Q96FL9 552 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 MRAP2Q96G30 205 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC35E1Q96K37 410 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 FAM210BQ96KR6 192 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 UBE2E2Q96LR5 201 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 PHB2Q99623 299 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF649Q9BS31 505 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 RSG1Q9BU20 258 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 PBDC1Q9BVG4 233 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 PARD6GQ9BYG4 376 aaPredicted RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms