RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SPANXN2Q5MJ10 180 aa8.08□□□□□ -1.12
CCDC47-206ENST00000584112 CCDC190Q86UF4 302 aa8.08□□□□□ -1.12
CCDC47-206ENST00000584112 CENPSQ8N2Z9 138 aa8.08□□□□□ -1.12
CCDC47-206ENST00000584112 CIB3Q96Q77 187 aaPredicted RBP8.08□□□□□ -1.12
CCDC47-206ENST00000584112 RAB40CQ96S21 281 aa8.08□□□□□ -1.12
CCDC47-206ENST00000584112 PBDC1Q9BVG4 233 aa8.08□□□□□ -1.12
CCDC47-206ENST00000584112 C1QTNF4Q9BXJ3 329 aa8.08□□□□□ -1.12
CCDC47-206ENST00000584112 HRH4Q9H3N8 390 aa8.08□□□□□ -1.12
CCDC47-206ENST00000584112 ZNF705EA8MWA4 302 aaPredicted RBP8.07□□□□□ -1.12
CCDC47-206ENST00000584112 C16orf90A8MZG2 172 aa8.07□□□□□ -1.12
CCDC47-206ENST00000584112 ZNF701M0R085 212 aaPredicted RBP8.07□□□□□ -1.12
CCDC47-206ENST00000584112 SFT2D2O95562 160 aa8.07□□□□□ -1.12
CCDC47-206ENST00000584112 GIG44P09565 113 aaPredicted RBP8.07□□□□□ -1.12
CCDC47-206ENST00000584112 IAPPP10997 89 aa8.07□□□□□ -1.12
CCDC47-206ENST00000584112 C4BPBP20851 252 aa8.07□□□□□ -1.12
CCDC47-206ENST00000584112 INPP1P49441 399 aa8.07□□□□□ -1.12
CCDC47-206ENST00000584112 TCTAP57738 103 aa8.07□□□□□ -1.12
CCDC47-206ENST00000584112 UBE2MP61081 183 aaKnown RBP8.07□□□□□ -1.12
CCDC47-206ENST00000584112 Q8NAQ8 132 aa8.07□□□□□ -1.12
CCDC47-206ENST00000584112 C2CD4CQ8TF44 421 aa8.07□□□□□ -1.12
CCDC47-206ENST00000584112 FAT1Q14517 4588 aa8.07□□□□□ -1.12
CCDC47-206ENST00000584112 IGKV1D-37A0A075B6S9 117 aa8.06□□□□□ -1.12
CCDC47-206ENST00000584112 IGHV4-28A0A0C4DH34 117 aa8.06□□□□□ -1.12
CCDC47-206ENST00000584112 SNRPGP15A8MWD9 76 aa8.06□□□□□ -1.12
CCDC47-206ENST00000584112 EPM2AB3EWF7 344 aa8.06□□□□□ -1.12
CCDC47-206ENST00000584112 C11orf94C9JXX5 98 aa8.06□□□□□ -1.12
CCDC47-206ENST00000584112 DEFB4AO15263 64 aa8.06□□□□□ -1.12
CCDC47-206ENST00000584112 CFDP00746 253 aaPredicted RBP8.06□□□□□ -1.12
CCDC47-206ENST00000584112 NKX2-1P43699 371 aaPredicted RBP8.06□□□□□ -1.12
CCDC47-206ENST00000584112 ZNF90Q03938 601 aa8.06□□□□□ -1.12
CCDC47-206ENST00000584112 PPP1R1AQ13522 171 aa8.06□□□□□ -1.12
CCDC47-206ENST00000584112 C1orf194Q5T5A4 169 aa8.06□□□□□ -1.12
CCDC47-206ENST00000584112 PPP1R14BQ96C90 147 aa8.06□□□□□ -1.12
CCDC47-206ENST00000584112 TRGV9Q99603 122 aa8.06□□□□□ -1.12
CCDC47-206ENST00000584112 TBC1D24Q9ULP9 559 aa8.06□□□□□ -1.12
CCDC47-206ENST00000584112 PAIP2BQ9ULR5 123 aaKnown RBP8.06□□□□□ -1.12
CCDC47-206ENST00000584112 NAP1L6A6NFF2 107 aa8.05□□□□□ -1.12
CCDC47-206ENST00000584112 SYNGR2O43760 224 aa8.05□□□□□ -1.12
CCDC47-206ENST00000584112 HOXB5P09067 269 aa8.05□□□□□ -1.12
CCDC47-206ENST00000584112 ID1P41134 155 aa8.05□□□□□ -1.12
CCDC47-206ENST00000584112 LYZP61626 148 aa8.05□□□□□ -1.12
CCDC47-206ENST00000584112 SAMD13Q5VXD3 122 aa8.05□□□□□ -1.12
CCDC47-206ENST00000584112 GGNBP1Q5YKI7 109 aa8.05□□□□□ -1.12
CCDC47-206ENST00000584112 THAP8Q8NA92 274 aa8.05□□□□□ -1.12
CCDC47-206ENST00000584112 CSNK1G2-AS1Q8NCQ2 148 aa8.05□□□□□ -1.12
CCDC47-206ENST00000584112 RBM38Q9H0Z9 239 aaKnown RBP8.05□□□□□ -1.12
CCDC47-206ENST00000584112 H3BMM0 161 aa8.04□□□□□ -1.12
CCDC47-206ENST00000584112 WRBO00258 174 aa8.04□□□□□ -1.12
CCDC47-206ENST00000584112 HLA-DRB4P13762 266 aa8.04□□□□□ -1.12
CCDC47-206ENST00000584112 S100A7P31151 101 aa8.04□□□□□ -1.12
CCDC47-206ENST00000584112 PSMB3P49720 205 aa8.04□□□□□ -1.12
CCDC47-206ENST00000584112 TRIQKQ629K1 86 aa8.04□□□□□ -1.12
CCDC47-206ENST00000584112 SRRQ9GZT4 340 aa8.04□□□□□ -1.12
CCDC47-206ENST00000584112 MAGT1Q9H0U3 335 aa8.04□□□□□ -1.12
CCDC47-206ENST00000584112 CLEC5AQ9NY25 188 aa8.04□□□□□ -1.12
CCDC47-206ENST00000584112 HLA-DRB4X5D2U9 266 aa8.04□□□□□ -1.12
CCDC47-206ENST00000584112 X6R8D5 127 aa8.04□□□□□ -1.12
CCDC47-206ENST00000584112 IGKV1OR2-108A0A075B7D4 117 aa8.03□□□□□ -1.12
CCDC47-206ENST00000584112 C9orf170A2RU37 121 aa8.03□□□□□ -1.12
CCDC47-206ENST00000584112 NDUFB6O95139 128 aa8.03□□□□□ -1.12
CCDC47-206ENST00000584112 MEOX2P50222 304 aa8.03□□□□□ -1.12
CCDC47-206ENST00000584112 OR2F1Q13607 317 aa8.03□□□□□ -1.12
CCDC47-206ENST00000584112 SPATA31B1PQ5VZV4 182 aa8.03□□□□□ -1.12
CCDC47-206ENST00000584112 FOXI2Q6ZQN5 318 aa8.03□□□□□ -1.12
CCDC47-206ENST00000584112 OR8I2Q8N0Y5 310 aa8.03□□□□□ -1.12
CCDC47-206ENST00000584112 BPIFCQ8NFQ6 507 aa8.03□□□□□ -1.12
CCDC47-206ENST00000584112 COQ8AQ8NI60 647 aa8.03□□□□□ -1.12
CCDC47-206ENST00000584112 LINC00052Q96N35 136 aa8.03□□□□□ -1.12
CCDC47-206ENST00000584112 XCL2Q9UBD3 114 aa8.03□□□□□ -1.12
CCDC47-206ENST00000584112 SLC45A2Q9UMX9 530 aa8.03□□□□□ -1.12
CCDC47-206ENST00000584112 STRAPQ9Y3F4 350 aaKnown RBP8.03□□□□□ -1.12
CCDC47-206ENST00000584112 TRAV10A0A0B4J240 114 aa8.02□□□□□ -1.13
CCDC47-206ENST00000584112 CENPXA8MT69 81 aa8.02□□□□□ -1.13
CCDC47-206ENST00000584112 IGLL5B9A064 214 aa8.02□□□□□ -1.13
CCDC47-206ENST00000584112 PRSS46E5RG02 174 aa8.02□□□□□ -1.13
CCDC47-206ENST00000584112 ISLRO14498 428 aa8.02□□□□□ -1.13
CCDC47-206ENST00000584112 IFNA21P01568 189 aa8.02□□□□□ -1.13
CCDC47-206ENST00000584112 HLA-DMBP28068 263 aa8.02□□□□□ -1.13
CCDC47-206ENST00000584112 GALR1P47211 349 aa8.02□□□□□ -1.13
CCDC47-206ENST00000584112 AKR1C1Q04828 323 aa8.02□□□□□ -1.13
CCDC47-206ENST00000584112 SPANXN5Q5MJ07 72 aa8.02□□□□□ -1.13
CCDC47-206ENST00000584112 CLUHP3Q96NS8 147 aa8.02□□□□□ -1.13
CCDC47-206ENST00000584112 C7orf50Q9BRJ6 194 aaKnown RBP8.02□□□□□ -1.13
CCDC47-206ENST00000584112 WDR12Q9GZL7 423 aaKnown RBP8.02□□□□□ -1.13
CCDC47-206ENST00000584112 SAV1Q9H4B6 383 aaPredicted RBP8.02□□□□□ -1.13
CCDC47-206ENST00000584112 ELOA3CA0A087WX78 387 aaPredicted RBP8.01□□□□□ -1.13
CCDC47-206ENST00000584112 H3BP45 60 aa8.01□□□□□ -1.13
CCDC47-206ENST00000584112 M0R2N4 97 aa8.01□□□□□ -1.13
CCDC47-206ENST00000584112 SOCS3O14543 225 aa8.01□□□□□ -1.13
CCDC47-206ENST00000584112 ID3Q02535 119 aa8.01□□□□□ -1.13
CCDC47-206ENST00000584112 BAK1Q16611 211 aa8.01□□□□□ -1.13
CCDC47-206ENST00000584112 CNPY1Q3B7I2 92 aa8.01□□□□□ -1.13
CCDC47-206ENST00000584112 EBLN2Q6P2I7 272 aa8.01□□□□□ -1.13
CCDC47-206ENST00000584112 GPR82Q96P67 336 aa8.01□□□□□ -1.13
CCDC47-206ENST00000584112 NEU1Q99519 415 aa8.01□□□□□ -1.13
CCDC47-206ENST00000584112 RPRMQ9NS64 109 aa8.01□□□□□ -1.13
CCDC47-206ENST00000584112 TMEM189A5PLL7 270 aa8□□□□□ -1.13
CCDC47-206ENST00000584112 SMIM9A6NGZ8 99 aa8□□□□□ -1.13
CCDC47-206ENST00000584112 ADAP1O75689 374 aa8□□□□□ -1.13
CCDC47-206ENST00000584112 IGKV3-20P01619 116 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms