RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 CDK2AP2O75956 126 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 TMEM50AO95807 157 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 CD74P04233 296 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 ANXA7P20073 488 aaKnown RBP3.81□□□□□ -1.8
VAPA-207ENST00000583879 C4BPBP20851 252 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 NPPCP23582 126 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 NPBWR1P48145 328 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 FAM3BP58499 235 aaPredicted RBP3.81□□□□□ -1.8
VAPA-207ENST00000583879 TAS2R60P59551 318 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 FLI1Q01543 452 aaPredicted RBP3.81□□□□□ -1.8
VAPA-207ENST00000583879 TRIM16LQ309B1 348 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 ACTL10Q5JWF8 245 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 C22orf42Q6IC83 251 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 Q6ZRM9 215 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 TMEM17Q86X19 198 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 OR5AP2Q8NGF4 316 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 PINX1Q96BK5 328 aaKnown RBP3.81□□□□□ -1.8
VAPA-207ENST00000583879 MOB3AQ96BX8 217 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 GRAMD2BQ96HH9 432 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 VCXQ9H320 206 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 NDUFB11Q9NX14 153 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 CELA1Q9UNI1 258 aa3.81□□□□□ -1.8
VAPA-207ENST00000583879 DNAH11Q96DT5 4516 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 A0A1B0GU03 582 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 A0A1W2PPQ1 181 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 USP17L23D6RBM5 183 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 F8W036 122 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 TEX46H3BTG2 121 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 ZNF688P0C7X2 276 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 LINC00614P0C842 121 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 SPART-AS1P0CW21 52 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 FGF9P31371 208 aaPredicted RBP3.8□□□□□ -1.8
VAPA-207ENST00000583879 HSPE1P61604 102 aaKnown RBP3.8□□□□□ -1.8
VAPA-207ENST00000583879 NUTF2P61970 127 aaKnown RBP3.8□□□□□ -1.8
VAPA-207ENST00000583879 ERHP84090 104 aaKnown RBP3.8□□□□□ -1.8
VAPA-207ENST00000583879 RNF212Q495C1 297 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 GAGE13Q4V321 117 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 C1orf134Q5TEV5 83 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 FAM159AQ6UWV7 190 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 ZNF367Q7RTV3 350 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 ZNF546Q86UE3 836 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 UBE2DNLQ8IWF7 75 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 CMTM1Q8IZ96 169 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 MAPKAPK5-AS1Q8N8E1 139 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 CCDC71LQ8N9Z2 235 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 ZNF114Q8NC26 417 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 STXBP6Q8NFX7 210 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 RNASE11Q8TAA1 199 aaKnown RBP3.8□□□□□ -1.8
VAPA-207ENST00000583879 DCANP1Q8TF63 244 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 FAM210BQ96KR6 192 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 ATG101Q9BSB4 218 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 C1QTNF4Q9BXJ3 329 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 CCDC59Q9P031 241 aaKnown RBP3.8□□□□□ -1.8
VAPA-207ENST00000583879 PKHD1P08F94 4074 aa3.8□□□□□ -1.8
VAPA-207ENST00000583879 SMIM9A6NGZ8 99 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 C16orf90A8MZG2 172 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 SMLR1H3BR10 107 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 VPREB1P12018 145 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 CRYBB3P26998 211 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 SNCAP37840 140 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 P2RY1P47900 373 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 RFX2P48378 723 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 HOXA1P49639 335 aaPredicted RBP3.79□□□□□ -1.8
VAPA-207ENST00000583879 AP2S1P53680 142 aaPredicted RBP3.79□□□□□ -1.8
VAPA-207ENST00000583879 HERV-K104P61576 105 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 PRCDQ00LT1 54 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 SFXN4Q6P4A7 337 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 H2BFWTQ7Z2G1 175 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 OR5H6Q8NGV6 325 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 OR4A16Q8NH70 328 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 LGALS14Q8TCE9 139 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 SEC22AQ96IW7 307 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 METTL26Q96S19 204 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 SEC22CQ9BRL7 303 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 ZNF2Q9BSG1 426 aaPredicted RBP3.79□□□□□ -1.8
VAPA-207ENST00000583879 TXNL4BQ9NX01 149 aaKnown RBP3.79□□□□□ -1.8
VAPA-207ENST00000583879 PTTG2Q9NZH5 202 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 XCL2Q9UBD3 114 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 DNAH17Q9UFH2 4485 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 PKD1P98161 4303 aa3.79□□□□□ -1.8
VAPA-207ENST00000583879 TMEM189A5PLL7 270 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 MEIS3P1A6NDR6 274 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 ZNF705FA8MVS1 300 aaPredicted RBP3.78□□□□□ -1.8
VAPA-207ENST00000583879 INS-IGF2F8WCM5 200 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 H3BMM0 161 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 CORTO00230 105 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 GPR31O00270 319 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 RS1O15537 224 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 PMP2P02689 132 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 HOXB5P09067 269 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 ZNF705DP0CH99 300 aaPredicted RBP3.78□□□□□ -1.8
VAPA-207ENST00000583879 ZNF705BP0CI00 300 aaPredicted RBP3.78□□□□□ -1.8
VAPA-207ENST00000583879 HLA-DMAP28067 261 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 SDC2P34741 201 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 EIF2B2P49770 351 aaKnown RBP3.78□□□□□ -1.8
VAPA-207ENST00000583879 SUB1P53999 127 aaKnown RBP eCLIP3.78□□□□□ -1.8
VAPA-207ENST00000583879 EMP1P54849 157 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 AQP4P55087 323 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 DHRS2Q13268 280 aa3.78□□□□□ -1.8
VAPA-207ENST00000583879 OXA1LQ15070 435 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms