RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 GSKIPQ9P0R6 139 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 ALG5Q9Y673 324 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 PKD1P98161 4303 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 HSPG2P98160 4391 aa8.85□□□□□ -0.99
TOP3A-215ENST00000583328 KNCNA6PVL3 124 aa8.85□□□□□ -0.99
TOP3A-215ENST00000583328 WRBO00258 174 aa8.85□□□□□ -0.99
TOP3A-215ENST00000583328 GOSR2O14653 212 aa8.85□□□□□ -0.99
TOP3A-215ENST00000583328 GNG7O60262 68 aa8.85□□□□□ -0.99
TOP3A-215ENST00000583328 APOHP02749 345 aaPredicted RBP8.85□□□□□ -0.99
TOP3A-215ENST00000583328 C4BPBP20851 252 aa8.85□□□□□ -0.99
TOP3A-215ENST00000583328 ATP5IP56385 69 aaPredicted RBP8.85□□□□□ -0.99
TOP3A-215ENST00000583328 C2orf83Q53S99 150 aa8.85□□□□□ -0.99
TOP3A-215ENST00000583328 TOMM20LQ6UXN7 152 aa8.85□□□□□ -0.99
TOP3A-215ENST00000583328 SCRT1Q9BWW7 348 aa8.85□□□□□ -0.99
TOP3A-215ENST00000583328 MAGT1Q9H0U3 335 aa8.85□□□□□ -0.99
TOP3A-215ENST00000583328 U3KQ87 197 aa8.85□□□□□ -0.99
TOP3A-215ENST00000583328 I3L2K1 104 aa8.84□□□□□ -0.99
TOP3A-215ENST00000583328 SCGB1D2O95969 90 aa8.84□□□□□ -0.99
TOP3A-215ENST00000583328 MT-CO2P00403 227 aa8.84□□□□□ -0.99
TOP3A-215ENST00000583328 IGHV3-48P01763 117 aa8.84□□□□□ -0.99
TOP3A-215ENST00000583328 IAPPP10997 89 aa8.84□□□□□ -0.99
TOP3A-215ENST00000583328 POLR2GP62487 172 aaKnown RBP eCLIP8.84□□□□□ -0.99
TOP3A-215ENST00000583328 Q6ZR54 194 aa8.84□□□□□ -0.99
TOP3A-215ENST00000583328 MAPKAPK5-AS1Q8N8E1 139 aa8.84□□□□□ -0.99
TOP3A-215ENST00000583328 TMEM231Q9H6L2 316 aa8.84□□□□□ -0.99
TOP3A-215ENST00000583328 C16orf90A8MZG2 172 aa8.83□□□□□ -1
TOP3A-215ENST00000583328 SSSCA1O60232 199 aa8.83□□□□□ -1
TOP3A-215ENST00000583328 MBPP02686 304 aaPredicted RBP8.83□□□□□ -1
TOP3A-215ENST00000583328 RPP30P78346 268 aaKnown RBP8.83□□□□□ -1
TOP3A-215ENST00000583328 ACTL10Q5JWF8 245 aa8.83□□□□□ -1
TOP3A-215ENST00000583328 C1orf134Q5TEV5 83 aa8.83□□□□□ -1
TOP3A-215ENST00000583328 STXBP6Q8NFX7 210 aa8.83□□□□□ -1
TOP3A-215ENST00000583328 RNASEH2CQ8TDP1 164 aaKnown RBP8.83□□□□□ -1
TOP3A-215ENST00000583328 TMEM170AQ8WVE7 144 aa8.83□□□□□ -1
TOP3A-215ENST00000583328 PINX1Q96BK5 328 aaKnown RBP8.83□□□□□ -1
TOP3A-215ENST00000583328 RAB40CQ96S21 281 aa8.83□□□□□ -1
TOP3A-215ENST00000583328 MGAT4CQ9UBM8 478 aa8.83□□□□□ -1
TOP3A-215ENST00000583328 RCL1Q9Y2P8 373 aaKnown RBP8.83□□□□□ -1
TOP3A-215ENST00000583328 RPS10-NUDT3A0A1W2PQS6 291 aa8.82□□□□□ -1
TOP3A-215ENST00000583328 K7EPK0 472 aa8.82□□□□□ -1
TOP3A-215ENST00000583328 K7EQG2 157 aa8.82□□□□□ -1
TOP3A-215ENST00000583328 SIX6O95475 246 aa8.82□□□□□ -1
TOP3A-215ENST00000583328 ZNF688P0C7X2 276 aa8.82□□□□□ -1
TOP3A-215ENST00000583328 OPRK1P41145 380 aa8.82□□□□□ -1
TOP3A-215ENST00000583328 NPBWR1P48145 328 aa8.82□□□□□ -1
TOP3A-215ENST00000583328 RAB11AP62491 216 aa8.82□□□□□ -1
TOP3A-215ENST00000583328 CYCSP99999 105 aaKnown RBP8.82□□□□□ -1
TOP3A-215ENST00000583328 IL15RAQ13261 267 aa8.82□□□□□ -1
TOP3A-215ENST00000583328 CSNK1G2-AS1Q8NCQ2 148 aa8.82□□□□□ -1
TOP3A-215ENST00000583328 SMIM8Q96KF7 97 aa8.82□□□□□ -1
TOP3A-215ENST00000583328 NMES1Q9C002 83 aa8.82□□□□□ -1
TOP3A-215ENST00000583328 MED28Q9H204 178 aa8.82□□□□□ -1
TOP3A-215ENST00000583328 PUS1Q9Y606 427 aaKnown RBP eCLIP8.82□□□□□ -1
TOP3A-215ENST00000583328 A0A1W2PS18 150 aa8.81□□□□□ -1
TOP3A-215ENST00000583328 TSC22D2O75157 780 aa8.81□□□□□ -1
TOP3A-215ENST00000583328 CDK2AP2O75956 126 aa8.81□□□□□ -1
TOP3A-215ENST00000583328 NPPCP23582 126 aa8.81□□□□□ -1
TOP3A-215ENST00000583328 H2BFSP57053 126 aa8.81□□□□□ -1
TOP3A-215ENST00000583328 TAS2R30P59541 319 aa8.81□□□□□ -1
TOP3A-215ENST00000583328 S100A10P60903 97 aa8.81□□□□□ -1
TOP3A-215ENST00000583328 SPANXN5Q5MJ07 72 aa8.81□□□□□ -1
TOP3A-215ENST00000583328 ETFRF1Q6IPR1 90 aa8.81□□□□□ -1
TOP3A-215ENST00000583328 ZNF600Q6ZNG1 722 aa8.81□□□□□ -1
TOP3A-215ENST00000583328 GRAMD2BQ96HH9 432 aa8.81□□□□□ -1
TOP3A-215ENST00000583328 FNDC4Q9H6D8 234 aaPredicted RBP8.81□□□□□ -1
TOP3A-215ENST00000583328 PSENENQ9NZ42 101 aa8.81□□□□□ -1
TOP3A-215ENST00000583328 STRAPQ9Y3F4 350 aaKnown RBP8.81□□□□□ -1
TOP3A-215ENST00000583328 LSM5Q9Y4Y9 91 aaKnown RBP8.81□□□□□ -1
TOP3A-215ENST00000583328 H3BP45 60 aa8.8□□□□□ -1
TOP3A-215ENST00000583328 L7N2F9 121 aa8.8□□□□□ -1
TOP3A-215ENST00000583328 TMEM50AO95807 157 aa8.8□□□□□ -1
TOP3A-215ENST00000583328 SPART-AS1P0CW21 52 aa8.8□□□□□ -1
TOP3A-215ENST00000583328 SLC25A4P12235 298 aa8.8□□□□□ -1
TOP3A-215ENST00000583328 PVALBP20472 110 aaPredicted RBP8.8□□□□□ -1
TOP3A-215ENST00000583328 PAX9P55771 341 aa8.8□□□□□ -1
TOP3A-215ENST00000583328 VAMP2P63027 116 aa8.8□□□□□ -1
TOP3A-215ENST00000583328 RAB32Q13637 225 aa8.8□□□□□ -1
TOP3A-215ENST00000583328 FAM210BQ96KR6 192 aa8.8□□□□□ -1
TOP3A-215ENST00000583328 ZFAND3Q9H8U3 227 aa8.8□□□□□ -1
TOP3A-215ENST00000583328 PAIP2BQ9ULR5 123 aaKnown RBP8.8□□□□□ -1
TOP3A-215ENST00000583328 AGRNO00468 2067 aa8.79□□□□□ -1
TOP3A-215ENST00000583328 CXCL3P19876 107 aa8.79□□□□□ -1
TOP3A-215ENST00000583328 GPX4P36969 197 aaPredicted RBP8.79□□□□□ -1
TOP3A-215ENST00000583328 NUTF2P61970 127 aaKnown RBP8.79□□□□□ -1
TOP3A-215ENST00000583328 RRAS2P62070 204 aaPredicted RBP8.79□□□□□ -1
TOP3A-215ENST00000583328 FCN2Q15485 313 aa8.79□□□□□ -1
TOP3A-215ENST00000583328 RNF212Q495C1 297 aa8.79□□□□□ -1
TOP3A-215ENST00000583328 TMEM14EPQ6UXP3 125 aa8.79□□□□□ -1
TOP3A-215ENST00000583328 METTL26Q96S19 204 aa8.79□□□□□ -1
TOP3A-215ENST00000583328 C1QTNF4Q9BXJ3 329 aa8.79□□□□□ -1
TOP3A-215ENST00000583328 C11orf1Q9H5F2 150 aa8.79□□□□□ -1
TOP3A-215ENST00000583328 XCL2Q9UBD3 114 aa8.79□□□□□ -1
TOP3A-215ENST00000583328 CLN5O75503 358 aa8.78□□□□□ -1
TOP3A-215ENST00000583328 SCGB2A1O75556 95 aa8.78□□□□□ -1
TOP3A-215ENST00000583328 RLN2P04090 185 aa8.78□□□□□ -1
TOP3A-215ENST00000583328 P2RY1P47900 373 aa8.78□□□□□ -1
TOP3A-215ENST00000583328 EMP1P54849 157 aa8.78□□□□□ -1
TOP3A-215ENST00000583328 TNP2Q05952 138 aa8.78□□□□□ -1
TOP3A-215ENST00000583328 MLANAQ16655 118 aa8.78□□□□□ -1
TOP3A-215ENST00000583328 PSMG4Q5JS54 123 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms