RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 OR8I2Q8N0Y5 310 aa8.82□□□□□ -1
SS18-219ENST00000581570 C16orf92Q96LL3 132 aa8.82□□□□□ -1
SS18-219ENST00000581570 UPK3BQ9BT76 320 aa8.82□□□□□ -1
SS18-219ENST00000581570 UCP1P25874 307 aa8.81□□□□□ -1
SS18-219ENST00000581570 KLF9Q13886 244 aaPredicted RBP8.81□□□□□ -1
SS18-219ENST00000581570 ESRGQ1W209 222 aa8.81□□□□□ -1
SS18-219ENST00000581570 IZUMO2Q6UXV1 221 aa8.81□□□□□ -1
SS18-219ENST00000581570 GPR141Q7Z602 305 aa8.81□□□□□ -1
SS18-219ENST00000581570 FAM219AQ8IW50 185 aa8.81□□□□□ -1
SS18-219ENST00000581570 OR11H7Q8NGC8 314 aa8.81□□□□□ -1
SS18-219ENST00000581570 PPP1R14BQ96C90 147 aa8.81□□□□□ -1
SS18-219ENST00000581570 GNPNAT1Q96EK6 184 aaPredicted RBP8.81□□□□□ -1
SS18-219ENST00000581570 MDFICQ9P1T7 246 aa8.81□□□□□ -1
SS18-219ENST00000581570 COPZ2Q9P299 210 aa8.81□□□□□ -1
SS18-219ENST00000581570 ZFP92A6NM28 416 aa8.8□□□□□ -1
SS18-219ENST00000581570 EREGO14944 169 aa8.8□□□□□ -1
SS18-219ENST00000581570 DUSP14O95147 198 aaKnown RBP8.8□□□□□ -1
SS18-219ENST00000581570 MEOX2P50222 304 aa8.8□□□□□ -1
SS18-219ENST00000581570 CNN1P51911 297 aaKnown RBP8.8□□□□□ -1
SS18-219ENST00000581570 LINC00315P59091 139 aa8.8□□□□□ -1
SS18-219ENST00000581570 LYZP61626 148 aa8.8□□□□□ -1
SS18-219ENST00000581570 ZNF90Q03938 601 aa8.8□□□□□ -1
SS18-219ENST00000581570 OR5I1Q13606 314 aa8.8□□□□□ -1
SS18-219ENST00000581570 LHFPL1Q86WI0 220 aa8.8□□□□□ -1
SS18-219ENST00000581570 BAP18Q8IXM2 172 aa8.8□□□□□ -1
SS18-219ENST00000581570 CCDC71LQ8N9Z2 235 aa8.8□□□□□ -1
SS18-219ENST00000581570 RXFP4Q8TDU9 374 aa8.8□□□□□ -1
SS18-219ENST00000581570 LINC01587Q99440 93 aa8.8□□□□□ -1
SS18-219ENST00000581570 VCX3BQ9H321 246 aa8.8□□□□□ -1
SS18-219ENST00000581570 TRAV26-1A0A087WT03 109 aa8.79□□□□□ -1
SS18-219ENST00000581570 SMIM31A0A1B0GVY4 71 aa8.79□□□□□ -1
SS18-219ENST00000581570 SNRPGP15A8MWD9 76 aa8.79□□□□□ -1
SS18-219ENST00000581570 B3GALNT1O75752 331 aa8.79□□□□□ -1
SS18-219ENST00000581570 SMR3BP02814 79 aaPredicted RBP8.79□□□□□ -1
SS18-219ENST00000581570 NMSQ5H8A3 153 aa8.79□□□□□ -1
SS18-219ENST00000581570 CDPF1Q6NVV7 123 aa8.79□□□□□ -1
SS18-219ENST00000581570 Q6ZRN7 208 aaPredicted RBP8.79□□□□□ -1
SS18-219ENST00000581570 SNX29P2Q8IUI4 249 aa8.79□□□□□ -1
SS18-219ENST00000581570 ARRDC1Q8N5I2 433 aa8.79□□□□□ -1
SS18-219ENST00000581570 ZFAND1Q8TCF1 268 aa8.79□□□□□ -1
SS18-219ENST00000581570 ZNF503Q96F45 646 aa8.79□□□□□ -1
SS18-219ENST00000581570 CACNG5Q9UF02 275 aa8.79□□□□□ -1
SS18-219ENST00000581570 MRPS16Q9Y3D3 137 aaKnown RBP8.79□□□□□ -1
SS18-219ENST00000581570 TIMM8BQ9Y5J9 83 aaPredicted RBP8.79□□□□□ -1
SS18-219ENST00000581570 TRAV12-2A0A075B6T6 113 aa8.78□□□□□ -1
SS18-219ENST00000581570 A0A0J9YY99 117 aa8.78□□□□□ -1
SS18-219ENST00000581570 ANKRD65E5RJM6 399 aa8.78□□□□□ -1
SS18-219ENST00000581570 CDS2O95674 445 aa8.78□□□□□ -1
SS18-219ENST00000581570 IFNA5P01569 189 aa8.78□□□□□ -1
SS18-219ENST00000581570 HTN1P15515 57 aa8.78□□□□□ -1
SS18-219ENST00000581570 M6PRP20645 277 aa8.78□□□□□ -1
SS18-219ENST00000581570 TGFBR1P36897 503 aa8.78□□□□□ -1
SS18-219ENST00000581570 RPS19P39019 145 aaKnown RBP8.78□□□□□ -1
SS18-219ENST00000581570 GALR1P47211 349 aa8.78□□□□□ -1
SS18-219ENST00000581570 KRTAP10-1P60331 282 aa8.78□□□□□ -1
SS18-219ENST00000581570 OR10J6PQ8NGY7 276 aa8.78□□□□□ -1
SS18-219ENST00000581570 C16orf74Q96GX8 76 aa8.78□□□□□ -1
SS18-219ENST00000581570 C17orf77Q96MU5 243 aa8.78□□□□□ -1
SS18-219ENST00000581570 RSG1Q9BU20 258 aa8.78□□□□□ -1
SS18-219ENST00000581570 NOP10Q9NPE3 64 aaKnown RBP8.78□□□□□ -1
SS18-219ENST00000581570 IGKV1D-37A0A075B6S9 117 aa8.77□□□□□ -1.01
SS18-219ENST00000581570 FAM229AH3BQW9 127 aa8.77□□□□□ -1.01
SS18-219ENST00000581570 FABP1P07148 127 aa8.77□□□□□ -1.01
SS18-219ENST00000581570 ZNF182P17025 639 aaPredicted RBP8.77□□□□□ -1.01
SS18-219ENST00000581570 TAS2R60P59551 318 aa8.77□□□□□ -1.01
SS18-219ENST00000581570 ERVFC1-1P60608 527 aa8.77□□□□□ -1.01
SS18-219ENST00000581570 OR2F1Q13607 317 aa8.77□□□□□ -1.01
SS18-219ENST00000581570 GAMTQ14353 236 aa8.77□□□□□ -1.01
SS18-219ENST00000581570 RNASE10Q5GAN6 216 aaKnown RBP8.77□□□□□ -1.01
SS18-219ENST00000581570 TMEM256Q8N2U0 113 aa8.77□□□□□ -1.01
SS18-219ENST00000581570 LHFPL5Q8TAF8 219 aa8.77□□□□□ -1.01
SS18-219ENST00000581570 RBPMSQ93062 196 aaKnown RBP8.77□□□□□ -1.01
SS18-219ENST00000581570 TMEM222Q9H0R3 208 aa8.77□□□□□ -1.01
SS18-219ENST00000581570 RAB26Q9ULW5 256 aa8.77□□□□□ -1.01
SS18-219ENST00000581570 U3KQ87 197 aa8.77□□□□□ -1.01
SS18-219ENST00000581570 BOLA2-SMG1P6H3BVE0 249 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 GABARAPH6UMI1 98 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 ZNF701M0R085 212 aaPredicted RBP8.76□□□□□ -1.01
SS18-219ENST00000581570 GABARAPO95166 117 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 OR5AC1P0C628 307 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 ICAM4Q14773 271 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 MEF2DQ14814 521 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 RNASE12Q5GAN4 147 aaKnown RBP8.76□□□□□ -1.01
SS18-219ENST00000581570 IGFL4Q6B9Z1 124 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 TMEM144Q7Z5S9 345 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 SELENOHQ8IZQ5 122 aaKnown RBP8.76□□□□□ -1.01
SS18-219ENST00000581570 OR13C8Q8NGS7 320 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 GLYATL2Q8WU03 294 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 SLC35E1Q96K37 410 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 SLC25A39Q9BZJ4 359 aaPredicted RBP8.76□□□□□ -1.01
SS18-219ENST00000581570 SLC25A32Q9H2D1 315 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 SLC25A22Q9H936 323 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 COMMD3Q9UBI1 195 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 CACFD1Q9UGQ2 172 aa8.76□□□□□ -1.01
SS18-219ENST00000581570 FLG2Q5D862 2391 aaPredicted RBP8.75□□□□□ -1.01
SS18-219ENST00000581570 TEX13DA0A0J9YY54 714 aaPredicted RBP8.75□□□□□ -1.01
SS18-219ENST00000581570 ADAP1O75689 374 aa8.75□□□□□ -1.01
SS18-219ENST00000581570 APOA1P02647 267 aa8.75□□□□□ -1.01
SS18-219ENST00000581570 CD3DP04234 171 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms