RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ZNF283Q8N7M2 679 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 OR11G2Q8NGC1 345 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 OR4D11Q8NGI4 311 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 SGMS2Q8NHU3 365 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 CD200R1Q8TD46 325 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 TOMM6Q96B49 74 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 ZNF799Q96GE5 643 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 ERMAPQ96PL5 475 aaPredicted RBP2.07□□□□□ -2.08
KPNB1-208ENST00000580019 PLA2G12AQ9BZM1 189 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 GABARAPL1Q9H0R8 117 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 C11orf68Q9H3H3 251 aaKnown RBP2.07□□□□□ -2.08
KPNB1-208ENST00000580019 COPZ2Q9P299 210 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 SNX12Q9UMY4 172 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 CYSLTR1Q9Y271 337 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 TRAPPC1Q9Y5R8 145 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 NUBP2Q9Y5Y2 271 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 ATRQ13535 2644 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 KNTC1P50748 2209 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 HIVEP1P15822 2718 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 KIF26AQ9ULI4 1882 aaPredicted RBP2.07□□□□□ -2.08
KPNB1-208ENST00000580019 MYH7BA7E2Y1 1941 aa2.07□□□□□ -2.08
KPNB1-208ENST00000580019 A0A096LNJ9 63 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 A0A1B0GX51 115 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 DUXBA0A1W2PPF3 345 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 PINLYPA6NC86 204 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 RFPL4AA6NLU0 287 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 RFPL4AL1F8VTS6 287 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 TMX2-CTNND1H3BSU7 103 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 UBE2L6O14933 153 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 PLA2G10O15496 165 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 BPGMP07738 259 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 ZNF286BP0CG31 522 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 COX4I1P13073 169 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 HLA-EP13747 358 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 NTF3P20783 257 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 MPV17P39210 176 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 PIGPP57054 158 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 DEFA3P59666 94 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 CKS1BP61024 79 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 BAMBIQ13145 260 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 RPL22L1Q6P5R6 122 aaKnown RBP2.06□□□□□ -2.08
KPNB1-208ENST00000580019 AGTRAPQ6RW13 159 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 AMTNQ6UX39 209 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 Q6ZS52 159 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 ZNF101Q8IZC7 436 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 RNF175Q8N4F7 328 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 ZNF709Q8N972 641 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 MAPK1IP1LQ8NDC0 245 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 NUP35Q8NFH5 326 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 OR8J3Q8NGG0 315 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 OR13C4Q8NGS5 318 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 THEM6Q8WUY1 208 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 DNAJC9Q8WXX5 260 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 ELSPBP1Q96BH3 223 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 RBMXL1Q96E39 390 aaKnown RBP2.06□□□□□ -2.08
KPNB1-208ENST00000580019 L3HYPDHQ96EM0 354 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 TMEM126AQ9H061 195 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 OR2D2Q9H210 308 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 VCXQ9H320 206 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 EFCAB1Q9HAE3 211 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 TPT1P8Q9HAU6 139 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 ZNF230Q9UIE0 474 aaPredicted RBP2.06□□□□□ -2.08
KPNB1-208ENST00000580019 RPUSD1Q9UJJ7 312 aaKnown RBP2.06□□□□□ -2.08
KPNB1-208ENST00000580019 LAMTOR2Q9Y2Q5 125 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 KLK5Q9Y337 293 aaPredicted RBP2.06□□□□□ -2.08
KPNB1-208ENST00000580019 LCTP09848 1927 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 DSCAML1Q8TD84 2053 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 MED13Q9UHV7 2174 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 CELSR2Q9HCU4 2923 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 CSPG4Q6UVK1 2322 aa2.06□□□□□ -2.08
KPNB1-208ENST00000580019 PTPRBP23467 1997 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.05□□□□□ -2.08
KPNB1-208ENST00000580019 TRAV36DV7A0A075B6V5 113 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 TRAV38-1A0A0B4J264 116 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 CLDN25C9JDP6 229 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 BET1O15155 118 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 CST8O60676 142 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 ZNF324O75467 553 aaPredicted RBP2.05□□□□□ -2.08
KPNB1-208ENST00000580019 SULT1C4O75897 302 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 OGNP20774 298 aaKnown RBP2.05□□□□□ -2.08
KPNB1-208ENST00000580019 HIST1H2BOP23527 126 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 NPPCP23582 126 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 BLVRBP30043 206 aaPredicted RBP2.05□□□□□ -2.08
KPNB1-208ENST00000580019 SDC4P31431 198 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 HIST1H2BBP33778 126 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 HIST1H2BDP58876 126 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 HIST1H2BCP62807 126 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 RPS28P62857 69 aaKnown RBP2.05□□□□□ -2.08
KPNB1-208ENST00000580019 OR8B8Q15620 311 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 HIST2H2BEQ16778 126 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 LTC4SQ16873 150 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 MRPL51Q4U2R6 128 aaKnown RBP2.05□□□□□ -2.08
KPNB1-208ENST00000580019 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.05□□□□□ -2.08
KPNB1-208ENST00000580019 RPL13AP3Q6NVV1 102 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 SSX8Q7RTT4 187 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 GTSCR1Q86UQ5 136 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 C11orf42Q8N5U0 333 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 MIR7-3HGQ8N6C7 128 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 OR5A1Q8NGJ0 315 aa2.05□□□□□ -2.08
KPNB1-208ENST00000580019 LMX1AQ8TE12 382 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms