RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 TMEM217Q8N7C4 229 aa10.87□□□□□ -0.67
SS18-212ENST00000579061 PPP1R14BQ96C90 147 aa10.87□□□□□ -0.67
SS18-212ENST00000579061 SEC22CQ9BRL7 303 aa10.87□□□□□ -0.67
SS18-212ENST00000579061 KNCNA6PVL3 124 aa10.86□□□□□ -0.67
SS18-212ENST00000579061 IL5P05113 134 aa10.86□□□□□ -0.67
SS18-212ENST00000579061 SELENOTP62341 195 aa10.86□□□□□ -0.67
SS18-212ENST00000579061 OR10P1Q8NGE3 313 aa10.86□□□□□ -0.67
SS18-212ENST00000579061 RARRES2Q99969 163 aa10.86□□□□□ -0.67
SS18-212ENST00000579061 NPVFQ9HCQ7 196 aa10.86□□□□□ -0.67
SS18-212ENST00000579061 BATF3Q9NR55 127 aa10.86□□□□□ -0.67
SS18-212ENST00000579061 LCE6AA0A183 80 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 SMCO3A2RU48 225 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 C7orf66A4D0T2 115 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 CCSO14618 274 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 METTL15P1P0C7V9 234 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 ID1P41134 155 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 ACTL10Q5JWF8 245 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 SAMD13Q5VXD3 122 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 CYP2G1PQ6ZSU1 146 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 OR8I2Q8N0Y5 310 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 OR11H2Q8NH07 326 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 C2orf50Q96LR7 162 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 GPR82Q96P67 336 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 GGACTQ9BVM4 153 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 MGAT4CQ9UBM8 478 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 RYR3Q15413 4870 aa10.85□□□□□ -0.67
SS18-212ENST00000579061 SACSQ9NZJ4 4579 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 C5orf51A6NDU8 294 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 ZNF98A6NK75 572 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 FAM25EA8MYX2 175 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 K7EPK0 472 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 L7N2F9 121 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 CCNKO75909 580 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 GIG44P09565 113 aaPredicted RBP10.84□□□□□ -0.67
SS18-212ENST00000579061 GATA2P23769 480 aaPredicted RBP10.84□□□□□ -0.67
SS18-212ENST00000579061 GALR1P47211 349 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 PSMB3P49720 205 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 MEOX2P50222 304 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 PLP1P60201 277 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 VAMP2P63027 116 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 TMEM182Q6ZP80 229 aaPredicted RBP10.84□□□□□ -0.67
SS18-212ENST00000579061 ENKURQ8TC29 256 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 TMEM147Q9BVK8 224 aa10.84□□□□□ -0.67
SS18-212ENST00000579061 C11orf68Q9H3H3 251 aaKnown RBP10.84□□□□□ -0.67
SS18-212ENST00000579061 SOCS3O14543 225 aa10.83□□□□□ -0.68
SS18-212ENST00000579061 DEDDO75618 318 aa10.83□□□□□ -0.68
SS18-212ENST00000579061 ORM2P19652 201 aa10.83□□□□□ -0.68
SS18-212ENST00000579061 NUTF2P61970 127 aaKnown RBP10.83□□□□□ -0.68
SS18-212ENST00000579061 RRAS2P62070 204 aaPredicted RBP10.83□□□□□ -0.68
SS18-212ENST00000579061 TEPPQ6URK8 271 aa10.83□□□□□ -0.68
SS18-212ENST00000579061 GSG1LQ6UXU4 331 aa10.83□□□□□ -0.68
SS18-212ENST00000579061 S100A7AQ86SG5 101 aa10.83□□□□□ -0.68
SS18-212ENST00000579061 C11orf1Q9H5F2 150 aa10.83□□□□□ -0.68
SS18-212ENST00000579061 GPN1Q9HCN4 374 aaPredicted RBP10.83□□□□□ -0.68
SS18-212ENST00000579061 LSM5Q9Y4Y9 91 aaKnown RBP10.83□□□□□ -0.68
SS18-212ENST00000579061 H3BMM0 161 aa10.82□□□□□ -0.68
SS18-212ENST00000579061 ISLRO14498 428 aa10.82□□□□□ -0.68
SS18-212ENST00000579061 HLA-DRB4P13762 266 aa10.82□□□□□ -0.68
SS18-212ENST00000579061 PVALBP20472 110 aaPredicted RBP10.82□□□□□ -0.68
SS18-212ENST00000579061 RAP2BP61225 183 aa10.82□□□□□ -0.68
SS18-212ENST00000579061 IFITM3Q01628 133 aa10.82□□□□□ -0.68
SS18-212ENST00000579061 EWSR1Q01844 656 aaKnown RBP eCLIP10.82□□□□□ -0.68
SS18-212ENST00000579061 IL15RAQ13261 267 aa10.82□□□□□ -0.68
SS18-212ENST00000579061 SPATA31B1PQ5VZV4 182 aa10.82□□□□□ -0.68
SS18-212ENST00000579061 OR1B1Q8NGR6 318 aa10.82□□□□□ -0.68
SS18-212ENST00000579061 CLUHP3Q96NS8 147 aa10.82□□□□□ -0.68
SS18-212ENST00000579061 C1QTNF4Q9BXJ3 329 aa10.82□□□□□ -0.68
SS18-212ENST00000579061 SLC25A32Q9H2D1 315 aa10.82□□□□□ -0.68
SS18-212ENST00000579061 HIGD1AQ9Y241 93 aa10.82□□□□□ -0.68
SS18-212ENST00000579061 HLA-DRB4X5D2U9 266 aa10.82□□□□□ -0.68
SS18-212ENST00000579061 H3BRN7 92 aa10.81□□□□□ -0.68
SS18-212ENST00000579061 PRAF2O60831 178 aa10.81□□□□□ -0.68
SS18-212ENST00000579061 HYPMO75409 117 aa10.81□□□□□ -0.68
SS18-212ENST00000579061 LINC00869P0C866 280 aa10.81□□□□□ -0.68
SS18-212ENST00000579061 C4BPBP20851 252 aa10.81□□□□□ -0.68
SS18-212ENST00000579061 ARL16Q0P5N6 197 aa10.81□□□□□ -0.68
SS18-212ENST00000579061 PXDC1Q5TGL8 231 aa10.81□□□□□ -0.68
SS18-212ENST00000579061 FOXI2Q6ZQN5 318 aa10.81□□□□□ -0.68
SS18-212ENST00000579061 SHANK2-AS3Q9BTD1 123 aa10.81□□□□□ -0.68
SS18-212ENST00000579061 SLC25A39Q9BZJ4 359 aaPredicted RBP10.81□□□□□ -0.68
SS18-212ENST00000579061 SLC25A22Q9H936 323 aa10.81□□□□□ -0.68
SS18-212ENST00000579061 RNF24Q9Y225 148 aa10.81□□□□□ -0.68
SS18-212ENST00000579061 CXorf65A6NEN9 183 aa10.8□□□□□ -0.68
SS18-212ENST00000579061 NUPR2A6NF83 97 aa10.8□□□□□ -0.68
SS18-212ENST00000579061 ZNF705EA8MWA4 302 aaPredicted RBP10.8□□□□□ -0.68
SS18-212ENST00000579061 JTBO76095 146 aa10.8□□□□□ -0.68
SS18-212ENST00000579061 ZNF546Q86UE3 836 aa10.8□□□□□ -0.68
SS18-212ENST00000579061 CSNK1G2-AS1Q8NCQ2 148 aa10.8□□□□□ -0.68
SS18-212ENST00000579061 LINC00052Q96N35 136 aa10.8□□□□□ -0.68
SS18-212ENST00000579061 SAV1Q9H4B6 383 aaPredicted RBP10.8□□□□□ -0.68
SS18-212ENST00000579061 AGPAT2O15120 278 aa10.79□□□□□ -0.68
SS18-212ENST00000579061 MIFP14174 115 aa10.79□□□□□ -0.68
SS18-212ENST00000579061 RPL7P18124 248 aaKnown RBP10.79□□□□□ -0.68
SS18-212ENST00000579061 BCAP31P51572 246 aa10.79□□□□□ -0.68
SS18-212ENST00000579061 CAV2P51636 162 aa10.79□□□□□ -0.68
SS18-212ENST00000579061 SLC38A11Q08AI6 406 aa10.79□□□□□ -0.68
SS18-212ENST00000579061 Q8NAQ8 132 aa10.79□□□□□ -0.68
SS18-212ENST00000579061 C16orf92Q96LL3 132 aa10.79□□□□□ -0.68
SS18-212ENST00000579061 C17orf77Q96MU5 243 aa10.79□□□□□ -0.68
SS18-212ENST00000579061 RSG1Q9BU20 258 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms