RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 CCDC32Q9BV29 185 aa6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SAV1Q9H4B6 383 aaPredicted RBP6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SLC25A22Q9H936 323 aa6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SEPSECSQ9HD40 501 aaKnown RBP6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 DNAH10Q8IVF4 4471 aa6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 VPS13DQ5THJ4 4388 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 F6UB75 175 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 H3BP45 60 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 PITX3O75364 302 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 MED6O75586 246 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SFT2D2O95562 160 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 INPP1P49441 399 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 PSMB3P49720 205 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 AKR1C1Q04828 323 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 PPP1R1AQ13522 171 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 C12orf74Q32Q52 190 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SPANXN5Q5MJ07 72 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 EBLN2Q6P2I7 272 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 FOXI2Q6ZQN5 318 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 C16orf92Q96LL3 132 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 TRGV9Q99603 122 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SLC35B3Q9H1N7 401 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 TMED3Q9Y3Q3 217 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 V9GYH0 126 aa6.63□□□□□ -1.35
CDK5RAP3-211ENST00000578996 AGRNO00468 2067 aa6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 IGKV1OR2-108A0A075B7D4 117 aa6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SMCO3A2RU48 225 aa6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SYNGR2O43760 224 aa6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SPART-AS1P0CW21 52 aa6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 ORM2P19652 201 aa6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 GATA2P23769 480 aaPredicted RBP6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 ZNF79Q15937 498 aa6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 C1orf194Q5T5A4 169 aa6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 CIB3Q96Q77 187 aaPredicted RBP6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SLC25A21Q9BQT8 299 aaPredicted RBP6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 C7orf50Q9BRJ6 194 aaKnown RBP6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 NDUFAF3Q9BU61 184 aa6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 RNF126Q9BV68 326 aa6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SCRT1Q9BWW7 348 aa6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SLC25A32Q9H2D1 315 aa6.62□□□□□ -1.35
CDK5RAP3-211ENST00000578996 ISLRO14498 428 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SOCS3O14543 225 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 UPK1BO75841 260 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 AMBPP02760 352 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SLC25A6P12236 298 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 HTN3P15516 51 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 GALR1P47211 349 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 PSG9Q00887 426 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 FGL1Q08830 312 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 FAM78BQ5VT40 261 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 GGNBP1Q5YKI7 109 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 ZNF705AQ6ZN79 300 aaPredicted RBP6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 ACOT7LQ6ZUV0 252 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 LRTM2Q8N967 370 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 ZNF709Q8N972 641 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 THAP8Q8NA92 274 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 BPIFCQ8NFQ6 507 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 OR1B1Q8NGR6 318 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 TMEM147Q9BVK8 224 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 RPRMQ9NS64 109 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 DOK5Q9P104 306 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 GOLT1BQ9Y3E0 138 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 STRAPQ9Y3F4 350 aaKnown RBP6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 RFNGQ9Y644 331 aa6.61□□□□□ -1.35
CDK5RAP3-211ENST00000578996 LINC00854A0A1B0GVQ3 168 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 TMEM189A5PLL7 270 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 ZNF98A6NK75 572 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 ZNF705FA8MVS1 300 aaPredicted RBP6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 ADAP1O75689 374 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 CFDP00746 253 aaPredicted RBP6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 HBE1P02100 147 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 ZNF705DP0CH99 300 aaPredicted RBP6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 ZNF705BP0CI00 300 aaPredicted RBP6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 P0DMU3 169 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 FAM231AP0DMU4 169 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 FAM231CP0DMU5 169 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 MEOX2P50222 304 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 POLR2GP62487 172 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 RGS21Q2M5E4 152 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 FAM222AQ5U5X8 452 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SAMD13Q5VXD3 122 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SPATA31B1PQ5VZV4 182 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 TRIQKQ629K1 86 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 UBE2DNLQ8IWF7 75 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 C20orf173Q96LM9 149 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 NEU1Q99519 415 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 TMEM208Q9BTX3 173 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 RSG1Q9BU20 258 aa6.6□□□□□ -1.35
CDK5RAP3-211ENST00000578996 HECTD4Q9Y4D8 3996 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 A0A0J9YX75 114 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 LOC102723971A0A1B0GUV8 181 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 C9orf170A2RU37 121 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SMIM9A6NGZ8 99 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 PRSS46E5RG02 174 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 M0R2N4 97 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SSSCA1O60232 199 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SCGB1D2O95969 90 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 S100A7P31151 101 aa6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 RRAS2P62070 204 aaPredicted RBP6.59□□□□□ -1.35
CDK5RAP3-211ENST00000578996 IFITM3Q01628 133 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms