RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 LRRC37A5PQ49AS3 106 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 Q56UQ5 140 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 C9orf66Q5T8R8 295 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 MORN5Q5VZ52 161 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 ZNF600Q6ZNG1 722 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 NOXA1Q86UR1 476 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 TMEM61Q8N0U2 210 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 Q8N1Y9 231 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 OR1S2Q8NGQ3 325 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 GLMPQ8WWB7 406 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 ASB13Q8WXK3 278 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 DPF1Q92782 380 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 ACY3Q96HD9 319 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 AQP10Q96PS8 301 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 GGACTQ9BVM4 153 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 GGTLC1Q9BX51 225 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 MED28Q9H204 178 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 ENY2Q9NPA8 101 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 DAZ1Q9NQZ3 744 aaKnown RBP2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 CYTL1Q9NRR1 136 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 GAR1Q9NY12 217 aaKnown RBP2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 MRPL27Q9P0M9 148 aaKnown RBP2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 SMPXQ9UHP9 88 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 SLC45A2Q9UMX9 530 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 TNFSF18Q9UNG2 199 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 ZNF256Q9Y2P7 627 aaPredicted RBP2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 HSPB11Q9Y547 144 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 PUS1Q9Y606 427 aaKnown RBP eCLIP2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 RFNGQ9Y644 331 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 DYNC2H1Q8NCM8 4307 aaKnown RBP2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 TRAV30A0A087WSZ9 112 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 H3BRN7 92 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 K7EIL1 84 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 SOCS3O14543 225 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 AGPAT2O15120 278 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 NUPL2O15504 423 aaKnown RBP2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 CYB5BO43169 146 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 ZNF207O43670 478 aaKnown RBP2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 BUB3O43684 328 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 YIF1AO95070 293 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 IFNA4P05014 189 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 INSL3P51460 131 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 BCAP31P51572 246 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 CAV2P51636 162 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 RAB11AP62491 216 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 RELQ04864 619 aaPredicted RBP2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 BAXQ07812 192 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 ODF3L2Q3SX64 289 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 CD300EQ496F6 205 aaPredicted RBP2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 OR8G2PQ6IF36 304 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 ETFRF1Q6IPR1 90 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 C16orf54Q6UWD8 224 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 BTNL8Q6UX41 500 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 LINC00322Q6ZN03 302 aaPredicted RBP2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 CYP2G1PQ6ZSU1 146 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 TCTE3Q8IZS6 198 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 FAM24BQ8N5W8 94 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 UBAC2Q8NBM4 344 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 OR10P1Q8NGE3 313 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 OR5C1Q8NGR4 320 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 OR2K2Q8NGT1 345 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 DCANP1Q8TF63 244 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 TMEM37Q8WXS4 190 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 ST8SIA2Q92186 375 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 MARC2Q969Z3 335 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 RNF125Q96EQ8 232 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 SLC35E1Q96K37 410 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 RNF2Q99496 336 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 NEURL2Q9BR09 285 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 MCRIP2Q9BUT9 160 aaKnown RBP2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 TMEM147Q9BVK8 224 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 PARD6GQ9BYG4 376 aaPredicted RBP2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 WDR61Q9GZS3 305 aaKnown RBP2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 ARV1Q9H2C2 271 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 NPVFQ9HCQ7 196 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 TECRQ9NZ01 308 aaKnown RBP2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 FBXL17Q9UF56 701 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 SELENOKQ9Y6D0 94 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 SMAD5-AS1Q9Y6J3 95 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 X6R8D5 127 aa2.82□□□□□ -1.96
SMARCE1-215ENST00000578995 IGHV3OR16-13A0A075B7E8 117 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 IGHV3-49A0A0A0MS15 119 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 IGHV3-74A0A0B4J1X5 117 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 UBE2L5PA0A1B0GUS4 154 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 HMSDA8MTL9 139 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 L7N2F9 121 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 TSPAN4O14817 238 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 SAP30O75446 220 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 PRB2P02812 416 aaPredicted RBP2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 IL4P05112 153 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 CD7P09564 240 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 RD3LP0DJH9 198 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 CXCL2P19875 107 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 PVALBP20472 110 aaPredicted RBP2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 RPL12P30050 165 aaKnown RBP2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 S100A11P31949 105 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 RPL29P47914 159 aaKnown RBP2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 RPL11P62913 178 aaKnown RBP2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 VAMP2P63027 116 aa2.81□□□□□ -1.96
SMARCE1-215ENST00000578995 RPP30P78346 268 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms