RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 BMI1P35226 326 aa16.15■□□□□ 0.18
CDC42EP4-203ENST00000578516 VWC2Q2TAL6 325 aa16.15■□□□□ 0.18
CDC42EP4-203ENST00000578516 OR5C1Q8NGR4 320 aa16.15■□□□□ 0.18
CDC42EP4-203ENST00000578516 PPP1R14BQ96C90 147 aa16.15■□□□□ 0.18
CDC42EP4-203ENST00000578516 GGACTQ9BVM4 153 aa16.15■□□□□ 0.18
CDC42EP4-203ENST00000578516 SCRT1Q9BWW7 348 aa16.15■□□□□ 0.18
CDC42EP4-203ENST00000578516 SLC45A2Q9UMX9 530 aa16.15■□□□□ 0.18
CDC42EP4-203ENST00000578516 WDR83OSQ9Y284 106 aa16.15■□□□□ 0.18
CDC42EP4-203ENST00000578516 AGRNO00468 2067 aa16.15■□□□□ 0.18
CDC42EP4-203ENST00000578516 TGP01266 2768 aa16.14■□□□□ 0.17
CDC42EP4-203ENST00000578516 OR4C46A6NHA9 309 aa16.14■□□□□ 0.17
CDC42EP4-203ENST00000578516 BAXQ07812 192 aa16.14■□□□□ 0.17
CDC42EP4-203ENST00000578516 MIC13Q5XKP0 118 aa16.14■□□□□ 0.17
CDC42EP4-203ENST00000578516 APRG1Q8IVJ8 170 aa16.14■□□□□ 0.17
CDC42EP4-203ENST00000578516 THAP6Q8TBB0 222 aa16.14■□□□□ 0.17
CDC42EP4-203ENST00000578516 GRAMD2BQ96HH9 432 aa16.14■□□□□ 0.17
CDC42EP4-203ENST00000578516 UHRF2Q96PU4 802 aa16.14■□□□□ 0.17
CDC42EP4-203ENST00000578516 GGTLC1Q9BX51 225 aa16.14■□□□□ 0.17
CDC42EP4-203ENST00000578516 SMIM3Q9BZL3 60 aa16.14■□□□□ 0.17
CDC42EP4-203ENST00000578516 TUBA4BQ9H853 241 aa16.14■□□□□ 0.17
CDC42EP4-203ENST00000578516 MAP6D1Q9H9H5 199 aa16.14■□□□□ 0.17
CDC42EP4-203ENST00000578516 FGF7P21781 194 aa16.13■□□□□ 0.17
CDC42EP4-203ENST00000578516 SLC25A32Q9H2D1 315 aa16.13■□□□□ 0.17
CDC42EP4-203ENST00000578516 SLC25A22Q9H936 323 aa16.13■□□□□ 0.17
CDC42EP4-203ENST00000578516 HUWE1Q7Z6Z7 4374 aaKnown RBP16.12■□□□□ 0.17
CDC42EP4-203ENST00000578516 DNASE2O00115 360 aaPredicted RBP16.12■□□□□ 0.17
CDC42EP4-203ENST00000578516 S100A11P31949 105 aa16.12■□□□□ 0.17
CDC42EP4-203ENST00000578516 HBG1P69891 147 aa16.12■□□□□ 0.17
CDC42EP4-203ENST00000578516 HBG2P69892 147 aa16.12■□□□□ 0.17
CDC42EP4-203ENST00000578516 PATE2Q6UY27 113 aa16.12■□□□□ 0.17
CDC42EP4-203ENST00000578516 SIGLEC15Q6ZMC9 328 aa16.12■□□□□ 0.17
CDC42EP4-203ENST00000578516 CHAC2Q8WUX2 184 aa16.12■□□□□ 0.17
CDC42EP4-203ENST00000578516 SLC25A31Q9H0C2 315 aa16.12■□□□□ 0.17
CDC42EP4-203ENST00000578516 ARL6Q9H0F7 186 aa16.12■□□□□ 0.17
CDC42EP4-203ENST00000578516 HSPB11Q9Y547 144 aa16.12■□□□□ 0.17
CDC42EP4-203ENST00000578516 K7EQG2 157 aa16.11■□□□□ 0.17
CDC42EP4-203ENST00000578516 OR5G3P0C626 314 aa16.11■□□□□ 0.17
CDC42EP4-203ENST00000578516 ZNF688P0C7X2 276 aa16.11■□□□□ 0.17
CDC42EP4-203ENST00000578516 LYL1P12980 280 aa16.11■□□□□ 0.17
CDC42EP4-203ENST00000578516 CAMLGP49069 296 aa16.11■□□□□ 0.17
CDC42EP4-203ENST00000578516 ZNF546Q86UE3 836 aa16.11■□□□□ 0.17
CDC42EP4-203ENST00000578516 DCANP1Q8TF63 244 aa16.11■□□□□ 0.17
CDC42EP4-203ENST00000578516 RETNQ9HD89 108 aa16.11■□□□□ 0.17
CDC42EP4-203ENST00000578516 A8MZ25 164 aa16.1■□□□□ 0.17
CDC42EP4-203ENST00000578516 H3BRN7 92 aa16.1■□□□□ 0.17
CDC42EP4-203ENST00000578516 GIPP09681 153 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP4-203ENST00000578516 PET100P0DJ07 73 aa16.1■□□□□ 0.17
CDC42EP4-203ENST00000578516 RPL12P30050 165 aaKnown RBP16.1■□□□□ 0.17
CDC42EP4-203ENST00000578516 OPCMLQ14982 345 aa16.1■□□□□ 0.17
CDC42EP4-203ENST00000578516 MORN5Q5VZ52 161 aa16.1■□□□□ 0.17
CDC42EP4-203ENST00000578516 WFDC1Q9HC57 220 aa16.1■□□□□ 0.17
CDC42EP4-203ENST00000578516 ZNF98A6NK75 572 aa16.09■□□□□ 0.17
CDC42EP4-203ENST00000578516 G3V3Q6 166 aa16.09■□□□□ 0.17
CDC42EP4-203ENST00000578516 SMLR1H3BR10 107 aa16.09■□□□□ 0.17
CDC42EP4-203ENST00000578516 DEFB131AP59861 70 aa16.09■□□□□ 0.17
CDC42EP4-203ENST00000578516 SELENOTP62341 195 aa16.09■□□□□ 0.17
CDC42EP4-203ENST00000578516 LINC00322Q6ZN03 302 aaPredicted RBP16.09■□□□□ 0.17
CDC42EP4-203ENST00000578516 C17orf77Q96MU5 243 aa16.09■□□□□ 0.17
CDC42EP4-203ENST00000578516 SLC25A39Q9BZJ4 359 aaPredicted RBP16.09■□□□□ 0.17
CDC42EP4-203ENST00000578516 HIGD1AQ9Y241 93 aa16.09■□□□□ 0.17
CDC42EP4-203ENST00000578516 HELTA6NFD8 242 aa16.08■□□□□ 0.16
CDC42EP4-203ENST00000578516 HYPMO75409 117 aa16.08■□□□□ 0.16
CDC42EP4-203ENST00000578516 CFDP00746 253 aaPredicted RBP16.08■□□□□ 0.16
CDC42EP4-203ENST00000578516 DEFB1P60022 68 aa16.08■□□□□ 0.16
CDC42EP4-203ENST00000578516 PLP1P60201 277 aa16.08■□□□□ 0.16
CDC42EP4-203ENST00000578516 PAFAH1B2P68402 229 aa16.08■□□□□ 0.16
CDC42EP4-203ENST00000578516 HAGHQ16775 308 aa16.08■□□□□ 0.16
CDC42EP4-203ENST00000578516 SHANK2-AS3Q9BTD1 123 aa16.08■□□□□ 0.16
CDC42EP4-203ENST00000578516 RFNGQ9Y644 331 aa16.08■□□□□ 0.16
CDC42EP4-203ENST00000578516 RPL35AP18077 110 aaKnown RBP16.07■□□□□ 0.16
CDC42EP4-203ENST00000578516 PRR20EP86478 221 aa16.07■□□□□ 0.16
CDC42EP4-203ENST00000578516 PRR20CP86479 221 aa16.07■□□□□ 0.16
CDC42EP4-203ENST00000578516 PRR20DP86480 221 aa16.07■□□□□ 0.16
CDC42EP4-203ENST00000578516 PRR20BP86481 221 aa16.07■□□□□ 0.16
CDC42EP4-203ENST00000578516 PRR20AP86496 221 aa16.07■□□□□ 0.16
CDC42EP4-203ENST00000578516 ATP6V1FQ16864 119 aa16.07■□□□□ 0.16
CDC42EP4-203ENST00000578516 OR8I2Q8N0Y5 310 aa16.07■□□□□ 0.16
CDC42EP4-203ENST00000578516 TMEM37Q8WXS4 190 aa16.07■□□□□ 0.16
CDC42EP4-203ENST00000578516 ARV1Q9H2C2 271 aa16.07■□□□□ 0.16
CDC42EP4-203ENST00000578516 PXMP4Q9Y6I8 212 aa16.07■□□□□ 0.16
CDC42EP4-203ENST00000578516 COL7A1Q02388 2944 aa16.06■□□□□ 0.16
CDC42EP4-203ENST00000578516 CD5P06127 495 aa16.06■□□□□ 0.16
CDC42EP4-203ENST00000578516 RAP2BP61225 183 aa16.06■□□□□ 0.16
CDC42EP4-203ENST00000578516 GCSAMLQ5JQS6 135 aa16.06■□□□□ 0.16
CDC42EP4-203ENST00000578516 ATP5SQ99766 215 aa16.06■□□□□ 0.16
CDC42EP4-203ENST00000578516 NPCDR1Q9BY65 106 aa16.06■□□□□ 0.16
CDC42EP4-203ENST00000578516 NRN1Q9NPD7 142 aa16.06■□□□□ 0.16
CDC42EP4-203ENST00000578516 TRAV2A0A0B4J234 112 aa16.05■□□□□ 0.16
CDC42EP4-203ENST00000578516 KNCNA6PVL3 124 aa16.05■□□□□ 0.16
CDC42EP4-203ENST00000578516 COX7A2P2O60397 106 aa16.05■□□□□ 0.16
CDC42EP4-203ENST00000578516 SNRPCP09234 159 aaKnown RBP16.05■□□□□ 0.16
CDC42EP4-203ENST00000578516 NUP62P37198 522 aaPredicted RBP16.05■□□□□ 0.16
CDC42EP4-203ENST00000578516 OR2T35Q8NGX2 323 aa16.05■□□□□ 0.16
CDC42EP4-203ENST00000578516 RSG1Q9BU20 258 aa16.05■□□□□ 0.16
CDC42EP4-203ENST00000578516 WDR61Q9GZS3 305 aaKnown RBP16.05■□□□□ 0.16
CDC42EP4-203ENST00000578516 SLC39A9Q9NUM3 307 aa16.05■□□□□ 0.16
CDC42EP4-203ENST00000578516 FXYD6-FXYD2A0A087WZ82 144 aa16.04■□□□□ 0.16
CDC42EP4-203ENST00000578516 SOCS3O14543 225 aa16.04■□□□□ 0.16
CDC42EP4-203ENST00000578516 PRB4P10163 310 aaPredicted RBP16.04■□□□□ 0.16
CDC42EP4-203ENST00000578516 B2MP61769 119 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms