RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 IMMP2LQ96T52 175 aa21.65■■□□□ 1.06
LIMD2-203ENST00000578067 PGPA6NDG6 321 aa21.64■■□□□ 1.05
LIMD2-203ENST00000578067 H3BUX3 64 aa21.64■■□□□ 1.05
LIMD2-203ENST00000578067 S100A6P06703 90 aa21.64■■□□□ 1.05
LIMD2-203ENST00000578067 CNN1P51911 297 aaKnown RBP21.64■■□□□ 1.05
LIMD2-203ENST00000578067 RHOGP84095 191 aa21.64■■□□□ 1.05
LIMD2-203ENST00000578067 C15orf32Q32M92 178 aa21.64■■□□□ 1.05
LIMD2-203ENST00000578067 S100A7AQ86SG5 101 aa21.64■■□□□ 1.05
LIMD2-203ENST00000578067 IGF2BP2-AS1Q96M15 143 aa21.64■■□□□ 1.05
LIMD2-203ENST00000578067 CDC42EP3Q9UKI2 254 aa21.64■■□□□ 1.05
LIMD2-203ENST00000578067 CTSGP08311 255 aa21.63■■□□□ 1.05
LIMD2-203ENST00000578067 HIST1H1EP10412 219 aaKnown RBP21.63■■□□□ 1.05
LIMD2-203ENST00000578067 LOXL1Q08397 574 aaPredicted RBP21.63■■□□□ 1.05
LIMD2-203ENST00000578067 DEFB113Q30KQ7 82 aa21.63■■□□□ 1.05
LIMD2-203ENST00000578067 EPDR1Q9UM22 224 aa21.63■■□□□ 1.05
LIMD2-203ENST00000578067 A6NDX4 124 aa21.63■■□□□ 1.05
LIMD2-203ENST00000578067 GGCTO75223 188 aaKnown RBP21.63■■□□□ 1.05
LIMD2-203ENST00000578067 SLC25A5P05141 298 aaKnown RBP21.63■■□□□ 1.05
LIMD2-203ENST00000578067 USF2Q15853 346 aaPredicted RBP21.63■■□□□ 1.05
LIMD2-203ENST00000578067 LY6EQ16553 131 aa21.63■■□□□ 1.05
LIMD2-203ENST00000578067 A0A1W2PPQ1 181 aa21.62■■□□□ 1.05
LIMD2-203ENST00000578067 BPIFA4PQ86YQ2 179 aa21.62■■□□□ 1.05
LIMD2-203ENST00000578067 LRRC75A-AS1Q8N1F1 130 aa21.62■■□□□ 1.05
LIMD2-203ENST00000578067 ZNF502Q8TBZ5 544 aa21.62■■□□□ 1.05
LIMD2-203ENST00000578067 FBN2P35556 2912 aa21.62■■□□□ 1.05
LIMD2-203ENST00000578067 J3QLI3 93 aa21.62■■□□□ 1.05
LIMD2-203ENST00000578067 TRGC2P03986 189 aa21.62■■□□□ 1.05
LIMD2-203ENST00000578067 CRIP2P52943 208 aaPredicted RBP21.62■■□□□ 1.05
LIMD2-203ENST00000578067 LINC00479Q96M42 142 aa21.62■■□□□ 1.05
LIMD2-203ENST00000578067 ZNF586Q9NXT0 402 aa21.62■■□□□ 1.05
LIMD2-203ENST00000578067 H3BTX0 84 aa21.61■■□□□ 1.05
LIMD2-203ENST00000578067 SNRPEP62304 92 aaKnown RBP21.61■■□□□ 1.05
LIMD2-203ENST00000578067 Q9H3A6 140 aa21.61■■□□□ 1.05
LIMD2-203ENST00000578067 SRD5A3Q9H8P0 318 aa21.61■■□□□ 1.05
LIMD2-203ENST00000578067 TRAV41A0A0B4J266 112 aa21.6■■□□□ 1.05
LIMD2-203ENST00000578067 RNF223E7ERA6 249 aa21.6■■□□□ 1.05
LIMD2-203ENST00000578067 IGLV2-8P01709 118 aa21.6■■□□□ 1.05
LIMD2-203ENST00000578067 GNG5P63218 68 aa21.6■■□□□ 1.05
LIMD2-203ENST00000578067 FOXL1Q12952 345 aa21.6■■□□□ 1.05
LIMD2-203ENST00000578067 OR5I1Q13606 314 aa21.6■■□□□ 1.05
LIMD2-203ENST00000578067 CHRDL1Q9BU40 450 aa21.6■■□□□ 1.05
LIMD2-203ENST00000578067 RNF24Q9Y225 148 aa21.6■■□□□ 1.05
LIMD2-203ENST00000578067 TGFAP01135 160 aa21.6■■□□□ 1.05
LIMD2-203ENST00000578067 MAPK1IP1LQ8NDC0 245 aa21.6■■□□□ 1.05
LIMD2-203ENST00000578067 C5orf52A6NGY3 159 aa21.59■■□□□ 1.05
LIMD2-203ENST00000578067 ZNF98A6NK75 572 aa21.59■■□□□ 1.05
LIMD2-203ENST00000578067 PPP5D1E7EU14 171 aa21.59■■□□□ 1.05
LIMD2-203ENST00000578067 GCGP01275 180 aa21.59■■□□□ 1.05
LIMD2-203ENST00000578067 ADMP35318 185 aa21.59■■□□□ 1.05
LIMD2-203ENST00000578067 FAM3BP58499 235 aaPredicted RBP21.59■■□□□ 1.05
LIMD2-203ENST00000578067 C19orf54Q5BKX5 351 aa21.59■■□□□ 1.05
LIMD2-203ENST00000578067 C9orf152Q5JTZ5 239 aa21.59■■□□□ 1.05
LIMD2-203ENST00000578067 C5orf17Q8NAS9 161 aa21.59■■□□□ 1.05
LIMD2-203ENST00000578067 OR4F17Q8NGA8 305 aa21.59■■□□□ 1.05
LIMD2-203ENST00000578067 PITPNC1Q9UKF7 332 aa21.59■■□□□ 1.05
LIMD2-203ENST00000578067 VPS13CQ709C8 3753 aa21.59■■□□□ 1.05
LIMD2-203ENST00000578067 ERVFC1-1P60608 527 aa21.58■■□□□ 1.05
LIMD2-203ENST00000578067 M0QZK8 103 aa21.58■■□□□ 1.04
LIMD2-203ENST00000578067 SMUG1Q53HV7 270 aa21.58■■□□□ 1.04
LIMD2-203ENST00000578067 BCL6BQ8N143 479 aaPredicted RBP21.58■■□□□ 1.04
LIMD2-203ENST00000578067 OTORQ9NRC9 128 aa21.58■■□□□ 1.04
LIMD2-203ENST00000578067 GAR1Q9NY12 217 aaKnown RBP21.58■■□□□ 1.04
LIMD2-203ENST00000578067 GPR183P32249 361 aa21.57■■□□□ 1.04
LIMD2-203ENST00000578067 MS4A10Q96PG2 267 aa21.57■■□□□ 1.04
LIMD2-203ENST00000578067 TRAV34A0A0B4J273 112 aa21.56■■□□□ 1.04
LIMD2-203ENST00000578067 IGLC2P0DOY2 106 aa21.56■■□□□ 1.04
LIMD2-203ENST00000578067 TMEM183BQ1AE95 376 aa21.56■■□□□ 1.04
LIMD2-203ENST00000578067 BTF3L4Q96K17 158 aa21.56■■□□□ 1.04
LIMD2-203ENST00000578067 ATG101Q9BSB4 218 aa21.56■■□□□ 1.04
LIMD2-203ENST00000578067 SVEP1Q4LDE5 3571 aa21.56■■□□□ 1.04
LIMD2-203ENST00000578067 ISLRO14498 428 aa21.56■■□□□ 1.04
LIMD2-203ENST00000578067 MGST1P10620 155 aaKnown RBP21.56■■□□□ 1.04
LIMD2-203ENST00000578067 Q5PR19 223 aa21.56■■□□□ 1.04
LIMD2-203ENST00000578067 EEF1AKMT3Q96AZ1 226 aa21.56■■□□□ 1.04
LIMD2-203ENST00000578067 KLF12Q9Y4X4 402 aa21.56■■□□□ 1.04
LIMD2-203ENST00000578067 TRBV19A0A075B6N1 114 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 MRPS12O15235 138 aaKnown RBP21.55■■□□□ 1.04
LIMD2-203ENST00000578067 TYMSP04818 313 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 IGF1P05019 195 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 CLEC3BP05452 202 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 UBE2G1P62253 170 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 BAGE2Q86Y30 109 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 OSTCQ9NRP0 149 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 IL36BQ9NZH7 164 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 ANKRD17O75179 2603 aaKnown RBP21.55■■□□□ 1.04
LIMD2-203ENST00000578067 AP4M1O00189 453 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 SLC17A3O00476 420 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 IGHG2P01859 326 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 LINC00527Q9UJ94 153 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 RPH3ALQ9UNE2 315 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 V9GYV3 84 aa21.55■■□□□ 1.04
LIMD2-203ENST00000578067 TRBV7-1A0A0A6YYK4 115 aa21.54■■□□□ 1.04
LIMD2-203ENST00000578067 TMEM190Q8WZ59 177 aa21.54■■□□□ 1.04
LIMD2-203ENST00000578067 CCDC140Q96MF4 163 aa21.54■■□□□ 1.04
LIMD2-203ENST00000578067 CELSR2Q9HCU4 2923 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 TCRAP04437 139 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 S100A9P06702 114 aaKnown RBP21.53■■□□□ 1.04
LIMD2-203ENST00000578067 IGHV4-31P0DP07 118 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 RABAC1Q9UI14 185 aa21.53■■□□□ 1.04
LIMD2-203ENST00000578067 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms