RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 C9orf118A6NHY6 69 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 GATA3P23771 443 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 PPIFP30405 207 aaKnown RBP4.29□□□□□ -1.72
VAPA-203ENST00000577539 ATP5IP56385 69 aaPredicted RBP4.29□□□□□ -1.72
VAPA-203ENST00000577539 YPEL3P61236 119 aaPredicted RBP4.29□□□□□ -1.72
VAPA-203ENST00000577539 DNLZQ5SXM8 178 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 IGFBPL1Q8WX77 278 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 TMEM68Q96MH6 324 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 C19orf24Q9BVV8 132 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 ZNF586Q9NXT0 402 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 PTPRBP23467 1997 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 A0A1W2PPI3 338 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 E7EQL1 145 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 FNDC10F2Z333 226 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 CNIH1O95406 144 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 EDN2P20800 178 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 CNTFRP26992 372 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 LOXP28300 417 aaPredicted RBP4.29□□□□□ -1.72
VAPA-203ENST00000577539 PPOXP50336 477 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 LYZP61626 148 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 RBPJQ06330 500 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 ZNF124Q15973 351 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 RPEQ96AT9 228 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 RNF2Q99496 336 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 ATG101Q9BSB4 218 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 MRPL32Q9BYC8 188 aaKnown RBP4.29□□□□□ -1.72
VAPA-203ENST00000577539 GNB4Q9HAV0 340 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 OSTCQ9NRP0 149 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 DMXL1Q9Y485 3027 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 TCRBV4S1A1TA0A5B7 111 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 PEX7O00628 323 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 RBP4P02753 201 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 SELENOTP62341 195 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 PAFAH1B2P68402 229 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 FAM168AQ92567 244 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 FBXL15Q9H469 300 aa4.29□□□□□ -1.72
VAPA-203ENST00000577539 AKAP13Q12802 2813 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 ZNF292O60281 2723 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.28□□□□□ -1.72
VAPA-203ENST00000577539 CGB1A6NKQ9 187 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 NPIPB5A8MRT5 1133 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 ISLRO14498 428 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 FCN3O75636 299 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 APCSP02743 223 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 IGHV1-8P0DP01 117 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 BRS3P32247 399 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 Q6ZWC4 215 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 ASCL5Q7RTU5 278 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 FAM19A2Q8N3H0 131 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 VAMP8Q9BV40 100 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 SLC25A2Q9BXI2 301 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 LINC00574Q9H8X3 128 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 ONECUT1Q9UBC0 465 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 TIMM8BQ9Y5J9 83 aaPredicted RBP4.28□□□□□ -1.72
VAPA-203ENST00000577539 LY96Q9Y6Y9 160 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 DSCAML1Q8TD84 2053 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 TRAV9-1A0A075B6T8 112 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 LY6HO94772 140 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 G0S2P27469 103 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 SSTP61278 116 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 CX3CL1P78423 397 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 PATE2Q6UY27 113 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 FAM167A-AS1Q96KT0 104 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 TMEM133Q9H2Q1 129 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 HSBP1L1C9JCN9 74 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 HYPMO75409 117 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 MT-ND6P03923 174 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 NBEAP1P0C6P0 100 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 GPR6P46095 362 aaPredicted RBP4.28□□□□□ -1.72
VAPA-203ENST00000577539 LGALS7P47929 136 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 HES1Q14469 280 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 TDRG1Q3Y452 100 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 TMEM155Q4W5P6 130 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 DAZAP1Q96EP5 407 aaKnown RBP4.28□□□□□ -1.72
VAPA-203ENST00000577539 GNB1LQ9BYB4 327 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 RALYQ9UKM9 306 aaKnown RBP4.28□□□□□ -1.72
VAPA-203ENST00000577539 TP53TG3Q9ULZ0 132 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 TBL2Q9Y4P3 447 aaKnown RBP4.28□□□□□ -1.72
VAPA-203ENST00000577539 S4R3C0 116 aa4.28□□□□□ -1.72
VAPA-203ENST00000577539 ARHGAP32A7KAX9 2087 aa4.28□□□□□ -1.73
VAPA-203ENST00000577539 RAI1Q7Z5J4 1906 aaPredicted RBP4.27□□□□□ -1.73
VAPA-203ENST00000577539 DIRC3C9JPN6 131 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 M0R143 59 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 HSBP1O75506 76 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 HLA-DQA1P01909 254 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 CD24P25063 80 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 APOBEC3AP31941 199 aaPredicted RBP4.27□□□□□ -1.73
VAPA-203ENST00000577539 OR2D3Q8NGH3 330 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 HILPDAQ9Y5L2 63 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 TRBV9A0A0B4J1U6 114 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 IGHV2-26A0A0B4J1V2 119 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 PPIAL4CA0A0B4J2A2 164 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 CORTO00230 105 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 PPIAL4GP0DN37 164 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 TDGF1P3P51864 188 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 TAS2R60P59551 318 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 TMEM183BQ1AE95 376 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 C1orf194Q5T5A4 169 aa4.27□□□□□ -1.73
VAPA-203ENST00000577539 RNASEKQ6P5S7 137 aaKnown RBP4.27□□□□□ -1.73
VAPA-203ENST00000577539 TMEM136Q6ZRR5 245 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms