RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SMDT1Q9H4I9 107 aa6□□□□□ -1.45
CCDC40-215ENST00000576033 IGHV3OR16-13A0A075B7E8 117 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 TRBV7-1A0A0A6YYK4 115 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 IGHV3-74A0A0B4J1X5 117 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 ZNF320A2RRD8 509 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 C2orf70A6NJV1 201 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 K7EIL1 84 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 WIPF1O43516 503 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 GGCTO75223 188 aaKnown RBP5.99□□□□□ -1.45
CCDC40-215ENST00000576033 YIF1AO95070 293 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 MBP02144 154 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 IFNA4P05014 189 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 CTSGP08311 255 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 H2AFB1P0C5Y9 115 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 GPX4P36969 197 aaPredicted RBP5.99□□□□□ -1.45
CCDC40-215ENST00000576033 RND2P52198 227 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 RAB2AP61019 212 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 CCL20P78556 96 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 PRR20EP86478 221 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 PRR20CP86479 221 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 PRR20DP86480 221 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 PRR20BP86481 221 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 PRR20AP86496 221 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 CD69Q07108 199 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 ZNF506Q5JVG8 444 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 C9orf66Q5T8R8 295 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 SSX7Q7RTT5 188 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 TMEM144Q7Z5S9 345 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 RPP25LQ8N5L8 163 aaKnown RBP5.99□□□□□ -1.45
CCDC40-215ENST00000576033 RNASEH2CQ8TDP1 164 aaKnown RBP5.99□□□□□ -1.45
CCDC40-215ENST00000576033 VN1R17PQ8TDU5 208 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 ACY3Q96HD9 319 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 SEC11CQ9BY50 192 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 WFDC10AQ9H1F0 79 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 NPVFQ9HCQ7 196 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 KCNIP2Q9NS61 270 aa5.99□□□□□ -1.45
CCDC40-215ENST00000576033 IGKV1OR2-108A0A075B7D4 117 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 IGHV3-66A0A0C4DH42 116 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 CTXND1A0A1B0GTU2 59 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 C17orf112F2Z3M2 114 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 APOHP02749 345 aaPredicted RBP5.98□□□□□ -1.45
CCDC40-215ENST00000576033 M6PRP20645 277 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 RPL29P47914 159 aaKnown RBP5.98□□□□□ -1.45
CCDC40-215ENST00000576033 EGFEM1PQ0D2K5 195 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 GUK1Q16774 197 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 FFAR4Q5NUL3 377 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 SLC16A13Q7RTY0 426 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 THAP8Q8NA92 274 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 OR10G4Q8NGN3 311 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 TMEM190Q8WZ59 177 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 C20orf24Q9BUV8 137 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 ZFAND3Q9H8U3 227 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 THYN1Q9P016 225 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 MLXQ9UH92 298 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 SLC45A2Q9UMX9 530 aa5.98□□□□□ -1.45
CCDC40-215ENST00000576033 TENM3Q9P273 2699 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 IGKV1D-37A0A075B6S9 117 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 LOC102723971A0A1B0GUV8 181 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 MAP1LC3B2A6NCE7 125 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 AGPAT2O15120 278 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 GNG7O60262 68 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 IGKV1-17P01599 117 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 IGLV1-51P01701 117 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 LINC00869P0C866 280 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 IGLC1P0CG04 106 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 FOLR2P14207 255 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 MFAP4P55083 255 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 ELLP55199 621 aaPredicted RBP5.97□□□□□ -1.45
CCDC40-215ENST00000576033 AKR1C1Q04828 323 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 GAMTQ14353 236 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 PEA15Q15121 130 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 CD300EQ496F6 205 aaPredicted RBP5.97□□□□□ -1.45
CCDC40-215ENST00000576033 TEPPQ6URK8 271 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 REC114Q7Z4M0 266 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 ZNF709Q8N972 641 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 SFT2D1Q8WV19 159 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 NPIPB3Q92617 1050 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 PBDC1Q9BVG4 233 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 MAP1LC3BQ9GZQ8 125 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 TMEM231Q9H6L2 316 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 PXMP4Q9Y6I8 212 aa5.97□□□□□ -1.45
CCDC40-215ENST00000576033 RBFOX3A6NFN3 312 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 A8MWP6 167 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 CORTO00230 105 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 CLN5O75503 358 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 SFTA3P0C7M3 94 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 BCL2P10415 239 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 GATA2P23769 480 aaPredicted RBP5.96□□□□□ -1.46
CCDC40-215ENST00000576033 SUB1P53999 127 aaKnown RBP eCLIP5.96□□□□□ -1.46
CCDC40-215ENST00000576033 ZNF90Q03938 601 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 ICAM4Q14773 271 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 USF2Q15853 346 aaPredicted RBP5.96□□□□□ -1.46
CCDC40-215ENST00000576033 ACOT6Q3I5F7 207 aaPredicted RBP5.96□□□□□ -1.46
CCDC40-215ENST00000576033 KHDC3LQ587J8 217 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 FAM209BQ5JX69 171 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 MIC13Q5XKP0 118 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 TOMM20LQ6UXN7 152 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 GPHB5Q86YW7 130 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 STPG3Q8N7X2 389 aa5.96□□□□□ -1.46
CCDC40-215ENST00000576033 TMEM116Q8NCL8 245 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms