RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 SLC35E1Q96K37 410 aa8.32□□□□□ -1.08
CTNS-208ENST00000574218 CACFD1Q9UGQ2 172 aa8.32□□□□□ -1.08
CTNS-208ENST00000574218 SOCS3O14543 225 aa8.31□□□□□ -1.08
CTNS-208ENST00000574218 TNFAIP8O95379 198 aa8.31□□□□□ -1.08
CTNS-208ENST00000574218 ZNF182P17025 639 aaPredicted RBP8.31□□□□□ -1.08
CTNS-208ENST00000574218 UCP1P25874 307 aa8.31□□□□□ -1.08
CTNS-208ENST00000574218 OR5I1Q13606 314 aa8.31□□□□□ -1.08
CTNS-208ENST00000574218 FCN2Q15485 313 aa8.31□□□□□ -1.08
CTNS-208ENST00000574218 ARRDC1Q8N5I2 433 aa8.31□□□□□ -1.08
CTNS-208ENST00000574218 OR10J6PQ8NGY7 276 aa8.31□□□□□ -1.08
CTNS-208ENST00000574218 C18orf15Q96N68 181 aa8.31□□□□□ -1.08
CTNS-208ENST00000574218 PPP1R14DQ9NXH3 145 aa8.31□□□□□ -1.08
CTNS-208ENST00000574218 ZNF586Q9NXT0 402 aa8.31□□□□□ -1.08
CTNS-208ENST00000574218 CACNG5Q9UF02 275 aa8.31□□□□□ -1.08
CTNS-208ENST00000574218 RAB26Q9ULW5 256 aa8.31□□□□□ -1.08
CTNS-208ENST00000574218 SNRPGP15A8MWD9 76 aa8.3□□□□□ -1.08
CTNS-208ENST00000574218 M0R2Z0 102 aa8.3□□□□□ -1.08
CTNS-208ENST00000574218 ADAP1O75689 374 aa8.3□□□□□ -1.08
CTNS-208ENST00000574218 NXPH3O95157 252 aa8.3□□□□□ -1.08
CTNS-208ENST00000574218 IFNA5P01569 189 aa8.3□□□□□ -1.08
CTNS-208ENST00000574218 PRM2P04554 102 aa8.3□□□□□ -1.08
CTNS-208ENST00000574218 TMEM256Q8N2U0 113 aa8.3□□□□□ -1.08
CTNS-208ENST00000574218 C16orf74Q96GX8 76 aa8.3□□□□□ -1.08
CTNS-208ENST00000574218 UHRF2Q96PU4 802 aa8.3□□□□□ -1.08
CTNS-208ENST00000574218 LINC01587Q99440 93 aa8.3□□□□□ -1.08
CTNS-208ENST00000574218 TIMM8BQ9Y5J9 83 aaPredicted RBP8.3□□□□□ -1.08
CTNS-208ENST00000574218 FLG2Q5D862 2391 aaPredicted RBP8.29□□□□□ -1.08
CTNS-208ENST00000574218 HTN1P15515 57 aa8.29□□□□□ -1.08
CTNS-208ENST00000574218 S100A7P31151 101 aa8.29□□□□□ -1.08
CTNS-208ENST00000574218 CNN1P51911 297 aaKnown RBP8.29□□□□□ -1.08
CTNS-208ENST00000574218 ERVFC1-1P60608 527 aa8.29□□□□□ -1.08
CTNS-208ENST00000574218 AARDQ4LEZ3 155 aa8.29□□□□□ -1.08
CTNS-208ENST00000574218 NMSQ5H8A3 153 aa8.29□□□□□ -1.08
CTNS-208ENST00000574218 CDPF1Q6NVV7 123 aa8.29□□□□□ -1.08
CTNS-208ENST00000574218 AMTNQ6UX39 209 aa8.29□□□□□ -1.08
CTNS-208ENST00000574218 BAP18Q8IXM2 172 aa8.29□□□□□ -1.08
CTNS-208ENST00000574218 OR11H7Q8NGC8 314 aa8.29□□□□□ -1.08
CTNS-208ENST00000574218 RBPMSQ93062 196 aaKnown RBP8.29□□□□□ -1.08
CTNS-208ENST00000574218 UPK3BQ9BT76 320 aa8.29□□□□□ -1.08
CTNS-208ENST00000574218 KRTAP1-5Q9BYS1 174 aa8.29□□□□□ -1.08
CTNS-208ENST00000574218 C14orf166Q9Y224 244 aaKnown RBP8.29□□□□□ -1.08
CTNS-208ENST00000574218 TRAV26-1A0A087WT03 109 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 TEX13DA0A0J9YY54 714 aaPredicted RBP8.28□□□□□ -1.08
CTNS-208ENST00000574218 A8MTW9 85 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 BOLA2-SMG1P6H3BVE0 249 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 OR5AC1P0C628 307 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 M6PRP20645 277 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 RHOBP62745 196 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 ZNF90Q03938 601 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 OR2F1Q13607 317 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 NEDD8Q15843 81 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 SCGB2B2Q4G0G5 96 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 RNASE12Q5GAN4 147 aaKnown RBP8.28□□□□□ -1.08
CTNS-208ENST00000574218 TMEM144Q7Z5S9 345 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 LHFPL1Q86WI0 220 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 OR13C8Q8NGS7 320 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 RXFP4Q8TDU9 374 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 ZNF503Q96F45 646 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 C20orf173Q96LM9 149 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 RSG1Q9BU20 258 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 TMEM222Q9H0R3 208 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 Q9H521 79 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 SLC25A22Q9H936 323 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 COMMD3Q9UBI1 195 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 MRPS16Q9Y3D3 137 aaKnown RBP8.28□□□□□ -1.08
CTNS-208ENST00000574218 U3KQ87 197 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 FAT1Q14517 4588 aa8.28□□□□□ -1.08
CTNS-208ENST00000574218 TRAV12-2A0A075B6T6 113 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 A0A0J9YY99 117 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 ANKRD65E5RJM6 399 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 FAM229AH3BQW9 127 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 CDS2O95674 445 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 CFDP00746 253 aaPredicted RBP8.27□□□□□ -1.09
CTNS-208ENST00000574218 APOA1P02647 267 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 SULT1A3P0DMM9 295 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 SULT1A4P0DMN0 295 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 AZU1P20160 251 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 TBPP20226 339 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 RPS19P39019 145 aaKnown RBP8.27□□□□□ -1.09
CTNS-208ENST00000574218 LINC00315P59091 139 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 TAS2R60P59551 318 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 FGL1Q08830 312 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 GAMTQ14353 236 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 TMEM268Q5VZI3 342 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 LGI3Q8N145 548 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 ZNF738Q8NE65 137 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 TMEM170AQ8WVE7 144 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 SLC25A32Q9H2D1 315 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 VPS13BQ7Z7G8 4022 aa8.27□□□□□ -1.09
CTNS-208ENST00000574218 MYCBP2O75592 4640 aa8.26□□□□□ -1.09
CTNS-208ENST00000574218 PLAC8L1A1L4L8 177 aa8.26□□□□□ -1.09
CTNS-208ENST00000574218 CRXO43186 299 aaPredicted RBP8.26□□□□□ -1.09
CTNS-208ENST00000574218 ELK1P19419 428 aa8.26□□□□□ -1.09
CTNS-208ENST00000574218 TGFBR1P36897 503 aa8.26□□□□□ -1.09
CTNS-208ENST00000574218 GPX4P36969 197 aaPredicted RBP8.26□□□□□ -1.09
CTNS-208ENST00000574218 ZNF493Q6ZR52 646 aa8.26□□□□□ -1.09
CTNS-208ENST00000574218 SELENOHQ8IZQ5 122 aaKnown RBP8.26□□□□□ -1.09
CTNS-208ENST00000574218 OR1B1Q8NGR6 318 aa8.26□□□□□ -1.09
CTNS-208ENST00000574218 TERB2Q8NHR7 220 aa8.26□□□□□ -1.09
CTNS-208ENST00000574218 MARCH1Q8TCQ1 289 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms