RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 TREML4Q6UXN2 200 aa12.87□□□□□ -0.35
USP43-204ENST00000573955 OR5AN1Q8NGI8 311 aa12.87□□□□□ -0.35
USP43-204ENST00000573955 RITA1Q96K30 269 aa12.87□□□□□ -0.35
USP43-204ENST00000573955 WDR83OSQ9Y284 106 aa12.87□□□□□ -0.35
USP43-204ENST00000573955 CELSR1Q9NYQ6 3014 aa12.87□□□□□ -0.35
USP43-204ENST00000573955 PF4V1P10720 104 aa12.87□□□□□ -0.35
USP43-204ENST00000573955 HSD52Q0P140 79 aa12.87□□□□□ -0.35
USP43-204ENST00000573955 POU2AF1Q16633 256 aa12.87□□□□□ -0.35
USP43-204ENST00000573955 KIAA1644Q3SXP7 199 aa12.87□□□□□ -0.35
USP43-204ENST00000573955 PDLIM3Q53GG5 364 aaPredicted RBP12.87□□□□□ -0.35
USP43-204ENST00000573955 TMEM177Q53S58 311 aa12.87□□□□□ -0.35
USP43-204ENST00000573955 SSMEM1Q8WWF3 244 aa12.87□□□□□ -0.35
USP43-204ENST00000573955 GNB4Q9HAV0 340 aa12.87□□□□□ -0.35
USP43-204ENST00000573955 TEX50A0A1B0GTY4 177 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 PRSS46E5RG02 174 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 CLEC3BP05452 202 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 MOB3BQ86TA1 216 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 Q8N7P7 452 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 GATAD1Q8WUU5 269 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 MRAP2Q96G30 205 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 ONECUT1Q9UBC0 465 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 PLXNB1O43157 2135 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 A0A1W2PS18 150 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 FCN1O00602 326 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 C10orf55Q5SWW7 151 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 LCN12Q6JVE5 192 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 OSR1Q8TAX0 266 aaPredicted RBP12.86□□□□□ -0.35
USP43-204ENST00000573955 ST6GALNAC6Q969X2 333 aa12.86□□□□□ -0.35
USP43-204ENST00000573955 E7EUB6 86 aa12.85□□□□□ -0.35
USP43-204ENST00000573955 NDUFS7O75251 213 aa12.85□□□□□ -0.35
USP43-204ENST00000573955 ZNF324O75467 553 aaPredicted RBP12.85□□□□□ -0.35
USP43-204ENST00000573955 LIPFP07098 398 aa12.85□□□□□ -0.35
USP43-204ENST00000573955 MIC13Q5XKP0 118 aa12.85□□□□□ -0.35
USP43-204ENST00000573955 OR8B3Q8NGG8 313 aa12.85□□□□□ -0.35
USP43-204ENST00000573955 AP1S3Q96PC3 154 aa12.85□□□□□ -0.35
USP43-204ENST00000573955 OR8B2Q96RD0 313 aa12.85□□□□□ -0.35
USP43-204ENST00000573955 MGST2Q99735 147 aa12.85□□□□□ -0.35
USP43-204ENST00000573955 FNDC4Q9H6D8 234 aaPredicted RBP12.85□□□□□ -0.35
USP43-204ENST00000573955 TPSG1Q9NRR2 321 aa12.85□□□□□ -0.35
USP43-204ENST00000573955 DOPEY1Q5JWR5 2465 aa12.85□□□□□ -0.35
USP43-204ENST00000573955 WNK2Q9Y3S1 2297 aa12.85□□□□□ -0.35
USP43-204ENST00000573955 PRCDQ00LT1 54 aa12.85□□□□□ -0.35
USP43-204ENST00000573955 UBTD1Q9HAC8 227 aa12.85□□□□□ -0.35
USP43-204ENST00000573955 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.84□□□□□ -0.35
USP43-204ENST00000573955 C11orf71Q6IPW1 123 aa12.84□□□□□ -0.35
USP43-204ENST00000573955 OR4C13Q8NGP0 309 aa12.84□□□□□ -0.35
USP43-204ENST00000573955 IGFBPL1Q8WX77 278 aa12.84□□□□□ -0.35
USP43-204ENST00000573955 CLEC7AQ9BXN2 247 aa12.84□□□□□ -0.35
USP43-204ENST00000573955 COMMD5Q9GZQ3 224 aa12.84□□□□□ -0.35
USP43-204ENST00000573955 C7orf71A4D174 169 aa12.84□□□□□ -0.35
USP43-204ENST00000573955 FAM231BA6NCW3 169 aa12.84□□□□□ -0.35
USP43-204ENST00000573955 HERV-K104P63124 156 aa12.84□□□□□ -0.35
USP43-204ENST00000573955 MLANAQ16655 118 aa12.84□□□□□ -0.35
USP43-204ENST00000573955 LINC00311Q8N616 119 aa12.84□□□□□ -0.35
USP43-204ENST00000573955 ITLN2Q8WWU7 325 aaPredicted RBP12.84□□□□□ -0.35
USP43-204ENST00000573955 CTXND1A0A1B0GTU2 59 aa12.83□□□□□ -0.36
USP43-204ENST00000573955 TSPAN13O95857 204 aa12.83□□□□□ -0.36
USP43-204ENST00000573955 RPL8P62917 257 aaKnown RBP12.83□□□□□ -0.36
USP43-204ENST00000573955 CCDC144NLQ6NUI1 221 aa12.83□□□□□ -0.36
USP43-204ENST00000573955 C1orf159Q96HA4 380 aa12.83□□□□□ -0.36
USP43-204ENST00000573955 SELENOKQ9Y6D0 94 aa12.83□□□□□ -0.36
USP43-204ENST00000573955 STAG3L2P0CL84 134 aa12.83□□□□□ -0.36
USP43-204ENST00000573955 RHOBP62745 196 aa12.83□□□□□ -0.36
USP43-204ENST00000573955 ZNF90Q03938 601 aa12.83□□□□□ -0.36
USP43-204ENST00000573955 CD300EQ496F6 205 aaPredicted RBP12.83□□□□□ -0.36
USP43-204ENST00000573955 PDPNQ86YL7 162 aa12.83□□□□□ -0.36
USP43-204ENST00000573955 CACNG8Q8WXS5 425 aa12.83□□□□□ -0.36
USP43-204ENST00000573955 NEIL1Q96FI4 390 aaPredicted RBP12.83□□□□□ -0.36
USP43-204ENST00000573955 GGTLC1Q9BX51 225 aa12.83□□□□□ -0.36
USP43-204ENST00000573955 ZNF257Q9Y2Q1 563 aa12.83□□□□□ -0.36
USP43-204ENST00000573955 GAGE12HA6NDE8 117 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 APELAP0DMC3 54 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 CNTFRP26992 372 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 RPL24P83731 157 aaKnown RBP12.82□□□□□ -0.36
USP43-204ENST00000573955 OR10J3Q5JRS4 329 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 OR4A5Q8NH83 315 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 RAB1CQ92928 201 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 TIMD4Q96H15 378 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 SS18L2Q9UHA2 77 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 NAV3Q8IVL0 2385 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 MDFIC2A0A1B0GVS7 189 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 NTF3P20783 257 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 Q56UQ5 140 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 NPFFR1Q9GZQ6 430 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 TP73-AS1Q9UF72 201 aa12.82□□□□□ -0.36
USP43-204ENST00000573955 A0A1W2PRD5 423 aa12.81□□□□□ -0.36
USP43-204ENST00000573955 A0A1W2PRF3 423 aa12.81□□□□□ -0.36
USP43-204ENST00000573955 A0A1W2PRM7 423 aa12.81□□□□□ -0.36
USP43-204ENST00000573955 SNURFLB1AK76 121 aa12.81□□□□□ -0.36
USP43-204ENST00000573955 K7EP34 96 aa12.81□□□□□ -0.36
USP43-204ENST00000573955 IGLV2-23P01705 113 aa12.81□□□□□ -0.36
USP43-204ENST00000573955 IGFBP2P18065 325 aa12.81□□□□□ -0.36
USP43-204ENST00000573955 GATA2P23769 480 aaPredicted RBP12.81□□□□□ -0.36
USP43-204ENST00000573955 C8orf31Q8N9H6 132 aa12.81□□□□□ -0.36
USP43-204ENST00000573955 PDE6DO43924 150 aa12.81□□□□□ -0.36
USP43-204ENST00000573955 IGHV3-48P01763 117 aa12.81□□□□□ -0.36
USP43-204ENST00000573955 FAM19A2Q8N3H0 131 aa12.81□□□□□ -0.36
USP43-204ENST00000573955 RCHY1Q96PM5 261 aa12.81□□□□□ -0.36
USP43-204ENST00000573955 ST20Q9HBF5 79 aa12.81□□□□□ -0.36
USP43-204ENST00000573955 A0A1W2PPV4 95 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms