RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 C22orf46C9J442 243 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 CEACAM4O75871 244 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 LYZP61626 148 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 DIAPH2-AS1Q14236 149 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 TMEM178BH3BS89 294 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 H3BTX0 84 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 FAM87AP0C7U9 286 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 HTR1DP28221 377 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 TMEM116Q8NCL8 245 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 GSX1Q9H4S2 264 aaPredicted RBP8.63□□□□□ -1.03
CCDC40-207ENST00000572253 AKAP6Q13023 2319 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 IGHV3-72A0A0B4J1Y9 119 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 IGHV1-24A0A0C4DH33 117 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 C19orf71A6NCJ1 209 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 SH2D7A6NKC9 451 aaPredicted RBP8.63□□□□□ -1.03
CCDC40-207ENST00000572253 C16orf97H3BN30 126 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 K7EQM0 130 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 CCL25O15444 150 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 PET117Q6UWS5 81 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 TMEM190Q8WZ59 177 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 TPSG1Q9NRR2 321 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 FRYQ5TBA9 3013 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 NAV3Q8IVL0 2385 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 IGHV3-21A0A0B4J1V1 117 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 VWC2LB2RUY7 222 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 GP9P14770 177 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 S100A7P31151 101 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 RIGQ13278 110 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 KIR3DL3Q8N743 410 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 ST6GALNAC6Q969X2 333 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 NDFIP1Q9BT67 221 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 DYNLRB1Q9NP97 96 aa8.63□□□□□ -1.03
CCDC40-207ENST00000572253 CEACAM8P31997 349 aaPredicted RBP8.62□□□□□ -1.03
CCDC40-207ENST00000572253 ADIPOQQ15848 244 aa8.62□□□□□ -1.03
CCDC40-207ENST00000572253 FBLN7Q53RD9 439 aa8.62□□□□□ -1.03
CCDC40-207ENST00000572253 C12orf54Q6X4T0 127 aa8.62□□□□□ -1.03
CCDC40-207ENST00000572253 PRNTQ86SH4 94 aa8.62□□□□□ -1.03
CCDC40-207ENST00000572253 Q86TA4 180 aa8.62□□□□□ -1.03
CCDC40-207ENST00000572253 GTSF1Q8WW33 167 aa8.62□□□□□ -1.03
CCDC40-207ENST00000572253 RNF24Q9Y225 148 aa8.62□□□□□ -1.03
CCDC40-207ENST00000572253 M0QZ24 198 aa8.62□□□□□ -1.03
CCDC40-207ENST00000572253 CRXO43186 299 aaPredicted RBP8.62□□□□□ -1.03
CCDC40-207ENST00000572253 OR4F17Q8NGA8 305 aa8.62□□□□□ -1.03
CCDC40-207ENST00000572253 PLP1P60201 277 aa8.62□□□□□ -1.03
CCDC40-207ENST00000572253 PRR31Q5SQ13 230 aa8.62□□□□□ -1.03
CCDC40-207ENST00000572253 GOLT1AQ6ZVE7 132 aa8.62□□□□□ -1.03
CCDC40-207ENST00000572253 LHFPL4Q7Z7J7 247 aa8.62□□□□□ -1.03
CCDC40-207ENST00000572253 APELAP0DMC3 54 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 IGFL3Q6UXB1 125 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 LINC00322Q6ZN03 302 aaPredicted RBP8.61□□□□□ -1.03
CCDC40-207ENST00000572253 FAM57AQ8TBR7 257 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 GTF2H5Q6ZYL4 71 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 URB1-AS1Q96HZ7 61 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 RASL11BQ9BPW5 248 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 A0A1B0GUT8 65 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 H0Y8G0 127 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 HAX1O00165 279 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 HLA-DRB1P01911 266 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 IGHV1-8P0DP01 117 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 TMEM155Q4W5P6 130 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 LYPD2Q6UXB3 125 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 Q6ZS92 163 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 PIP4P1Q86T03 277 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 TMEM133Q9H2Q1 129 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 MS4A6AQ9H2W1 248 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 TMEM14CQ9P0S9 112 aa8.61□□□□□ -1.03
CCDC40-207ENST00000572253 CELSR3Q9NYQ7 3312 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 NUDT3O95989 172 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 RBP4P02753 201 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 PLGLAQ15195 96 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 FA2HQ7L5A8 372 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 TNFRSF14Q92956 283 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 SCNM1Q9BWG6 230 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 F11RQ9Y624 299 aaKnown RBP8.6□□□□□ -1.03
CCDC40-207ENST00000572253 ARFGEF3Q5TH69 2177 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 hDV102S1A0JD36 115 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 TOX4O94842 621 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 LOXP28300 417 aaPredicted RBP8.6□□□□□ -1.03
CCDC40-207ENST00000572253 MPV17L2Q567V2 206 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 FAM120AOSQ5T036 256 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 Q6ZVH6 145 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 INSIG2Q9Y5U4 225 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 A0A1B0GW15 77 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 PRRG2O14669 202 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 CSN3P07498 182 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 CD24P25063 80 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 CSN1S1P47710 185 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 BSPH1Q075Z2 132 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 C22orf34Q6ZV56 151 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 SPATA12Q7Z6I5 190 aa8.6□□□□□ -1.03
CCDC40-207ENST00000572253 CIARTQ8N365 385 aaPredicted RBP8.6□□□□□ -1.03
CCDC40-207ENST00000572253 SRSF12Q8WXF0 261 aaKnown RBP8.6□□□□□ -1.03
CCDC40-207ENST00000572253 PVRIGQ6DKI7 326 aa8.59□□□□□ -1.03
CCDC40-207ENST00000572253 S100A7AQ86SG5 101 aa8.59□□□□□ -1.03
CCDC40-207ENST00000572253 SLC25A39Q9BZJ4 359 aaPredicted RBP8.59□□□□□ -1.03
CCDC40-207ENST00000572253 SIGLEC9Q9Y336 463 aa8.59□□□□□ -1.03
CCDC40-207ENST00000572253 TRAV30A0A087WSZ9 112 aa8.59□□□□□ -1.03
CCDC40-207ENST00000572253 IGHV2-70DA0A0C4DH43 119 aa8.59□□□□□ -1.03
CCDC40-207ENST00000572253 PSG1P11464 419 aa8.59□□□□□ -1.03
CCDC40-207ENST00000572253 PAX2Q02962 417 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms