RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 ZNF709Q8N972 641 aa10.46□□□□□ -0.74
RPAIN-209ENST00000571558 KLHL30-AS1Q8NEE0 82 aa10.46□□□□□ -0.74
RPAIN-209ENST00000571558 SLC39A9Q9NUM3 307 aa10.46□□□□□ -0.74
RPAIN-209ENST00000571558 PXMP4Q9Y6I8 212 aa10.46□□□□□ -0.74
RPAIN-209ENST00000571558 SMAD5-AS1Q9Y6J3 95 aa10.46□□□□□ -0.74
RPAIN-209ENST00000571558 CCL24O00175 119 aa10.45□□□□□ -0.74
RPAIN-209ENST00000571558 FABP1P07148 127 aa10.45□□□□□ -0.74
RPAIN-209ENST00000571558 PLP1P60201 277 aa10.45□□□□□ -0.74
RPAIN-209ENST00000571558 SERF2P84101 59 aa10.45□□□□□ -0.74
RPAIN-209ENST00000571558 RELQ04864 619 aaPredicted RBP10.45□□□□□ -0.74
RPAIN-209ENST00000571558 ZNF616Q08AN1 781 aa10.45□□□□□ -0.74
RPAIN-209ENST00000571558 FHL3Q13643 280 aa10.45□□□□□ -0.74
RPAIN-209ENST00000571558 DEFB136Q30KP8 78 aa10.45□□□□□ -0.74
RPAIN-209ENST00000571558 TMED6Q8WW62 240 aa10.45□□□□□ -0.74
RPAIN-209ENST00000571558 PHYHIPLQ96FC7 376 aa10.45□□□□□ -0.74
RPAIN-209ENST00000571558 PRR25Q96S07 402 aa10.45□□□□□ -0.74
RPAIN-209ENST00000571558 ZFAND3Q9H8U3 227 aa10.45□□□□□ -0.74
RPAIN-209ENST00000571558 KCNIP2Q9NS61 270 aa10.45□□□□□ -0.74
RPAIN-209ENST00000571558 ZNF256Q9Y2P7 627 aaPredicted RBP10.45□□□□□ -0.74
RPAIN-209ENST00000571558 PUS1Q9Y606 427 aaKnown RBP eCLIP10.45□□□□□ -0.74
RPAIN-209ENST00000571558 IGHV3-35A0A0C4DH35 117 aa10.44□□□□□ -0.74
RPAIN-209ENST00000571558 INSL3P51460 131 aa10.44□□□□□ -0.74
RPAIN-209ENST00000571558 B2MP61769 119 aa10.44□□□□□ -0.74
RPAIN-209ENST00000571558 IFITM2Q01629 132 aa10.44□□□□□ -0.74
RPAIN-209ENST00000571558 TEX261Q6UWH6 196 aa10.44□□□□□ -0.74
RPAIN-209ENST00000571558 TOMM20LQ6UXN7 152 aa10.44□□□□□ -0.74
RPAIN-209ENST00000571558 GPHB5Q86YW7 130 aa10.44□□□□□ -0.74
RPAIN-209ENST00000571558 OR51G1Q8NGK1 321 aa10.44□□□□□ -0.74
RPAIN-209ENST00000571558 Q8WTZ3 238 aa10.44□□□□□ -0.74
RPAIN-209ENST00000571558 RAX2Q96IS3 184 aa10.44□□□□□ -0.74
RPAIN-209ENST00000571558 LYSTQ99698 3801 aa10.44□□□□□ -0.74
RPAIN-209ENST00000571558 NDUFA4O00483 81 aa10.43□□□□□ -0.74
RPAIN-209ENST00000571558 GCSAMLQ5JQS6 135 aa10.43□□□□□ -0.74
RPAIN-209ENST00000571558 FFAR4Q5NUL3 377 aa10.43□□□□□ -0.74
RPAIN-209ENST00000571558 ALKAL2Q6UX46 152 aa10.43□□□□□ -0.74
RPAIN-209ENST00000571558 PATE2Q6UY27 113 aa10.43□□□□□ -0.74
RPAIN-209ENST00000571558 OR1N2Q8NGR9 330 aa10.43□□□□□ -0.74
RPAIN-209ENST00000571558 RNF125Q96EQ8 232 aa10.43□□□□□ -0.74
RPAIN-209ENST00000571558 DUX3Q96PT4 197 aa10.43□□□□□ -0.74
RPAIN-209ENST00000571558 CITED4Q96RK1 184 aa10.43□□□□□ -0.74
RPAIN-209ENST00000571558 VSIRQ9H7M9 311 aa10.43□□□□□ -0.74
RPAIN-209ENST00000571558 LINC01619G3V211 115 aa10.42□□□□□ -0.74
RPAIN-209ENST00000571558 IL4P05112 153 aa10.42□□□□□ -0.74
RPAIN-209ENST00000571558 ELLP55199 621 aaPredicted RBP10.42□□□□□ -0.74
RPAIN-209ENST00000571558 KLF5Q13887 457 aaPredicted RBP10.42□□□□□ -0.74
RPAIN-209ENST00000571558 USF2Q15853 346 aaPredicted RBP10.42□□□□□ -0.74
RPAIN-209ENST00000571558 PXDC1Q5TGL8 231 aa10.42□□□□□ -0.74
RPAIN-209ENST00000571558 EIF5AL1Q6IS14 154 aaKnown RBP10.42□□□□□ -0.74
RPAIN-209ENST00000571558 UNQ9165/PRO28630Q6UXU0 137 aa10.42□□□□□ -0.74
RPAIN-209ENST00000571558 ZNF680Q8NEM1 530 aa10.42□□□□□ -0.74
RPAIN-209ENST00000571558 OR11H1Q8NG94 326 aa10.42□□□□□ -0.74
RPAIN-209ENST00000571558 TMEM37Q8WXS4 190 aa10.42□□□□□ -0.74
RPAIN-209ENST00000571558 ZMAT4Q9H898 229 aa10.42□□□□□ -0.74
RPAIN-209ENST00000571558 MRPL27Q9P0M9 148 aaKnown RBP10.42□□□□□ -0.74
RPAIN-209ENST00000571558 SEC14L6B5MCN3 397 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 M6PRP20645 277 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 RAB2AP61019 212 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 RPEL1Q2QD12 228 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 Q6ZRG5 221 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 SBSPONQ8IVN8 264 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 TMEM190Q8WZ59 177 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 RPRMQ9NS64 109 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 HUWE1Q7Z6Z7 4374 aaKnown RBP10.41□□□□□ -0.74
RPAIN-209ENST00000571558 IGHV3OR16-8A0A075B7F1 116 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 UMAD1C9J7I0 102 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 LGALS9O00182 355 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 ORM2P19652 201 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 ZP3P21754 424 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 SLURP1P55000 103 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 LYZP61626 148 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 TMEM41BQ5BJD5 291 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 FAM74A1Q5RGS3 127 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 RPP25LQ8N5L8 163 aaKnown RBP10.41□□□□□ -0.74
RPAIN-209ENST00000571558 DNAJC4Q9NNZ3 241 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 DOK5Q9P104 306 aa10.41□□□□□ -0.74
RPAIN-209ENST00000571558 ELOA3CA0A087WX78 387 aaPredicted RBP10.4□□□□□ -0.75
RPAIN-209ENST00000571558 A8MWP6 167 aa10.4□□□□□ -0.75
RPAIN-209ENST00000571558 COX7A2P2O60397 106 aa10.4□□□□□ -0.75
RPAIN-209ENST00000571558 HYPMO75409 117 aa10.4□□□□□ -0.75
RPAIN-209ENST00000571558 MBP02144 154 aa10.4□□□□□ -0.75
RPAIN-209ENST00000571558 OR5G3P0C626 314 aa10.4□□□□□ -0.75
RPAIN-209ENST00000571558 FHITP49789 147 aa10.4□□□□□ -0.75
RPAIN-209ENST00000571558 SULT1A2P50226 295 aa10.4□□□□□ -0.75
RPAIN-209ENST00000571558 ZNF726P1Q15940 193 aa10.4□□□□□ -0.75
RPAIN-209ENST00000571558 ACOT6Q3I5F7 207 aaPredicted RBP10.4□□□□□ -0.75
RPAIN-209ENST00000571558 FAM106AQ4KMX7 169 aa10.4□□□□□ -0.75
RPAIN-209ENST00000571558 OR1L4Q8NGR5 311 aa10.4□□□□□ -0.75
RPAIN-209ENST00000571558 OR1B1Q8NGR6 318 aa10.4□□□□□ -0.75
RPAIN-209ENST00000571558 GATAD1Q8WUU5 269 aa10.4□□□□□ -0.75
RPAIN-209ENST00000571558 PBDC1Q9BVG4 233 aa10.4□□□□□ -0.75
RPAIN-209ENST00000571558 SEPSECSQ9HD40 501 aaKnown RBP10.4□□□□□ -0.75
RPAIN-209ENST00000571558 CRYBB3P26998 211 aa10.39□□□□□ -0.75
RPAIN-209ENST00000571558 SYNJ2BPP57105 145 aa10.39□□□□□ -0.75
RPAIN-209ENST00000571558 AKR1C8PQ5T2L2 129 aa10.39□□□□□ -0.75
RPAIN-209ENST00000571558 MORN5Q5VZ52 161 aa10.39□□□□□ -0.75
RPAIN-209ENST00000571558 C10orf113Q5VZT2 155 aa10.39□□□□□ -0.75
RPAIN-209ENST00000571558 OR10G4Q8NGN3 311 aa10.39□□□□□ -0.75
RPAIN-209ENST00000571558 OR10G9Q8NGN4 311 aa10.39□□□□□ -0.75
RPAIN-209ENST00000571558 OR10G7Q8NGN6 311 aa10.39□□□□□ -0.75
RPAIN-209ENST00000571558 DLX4Q92988 240 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms