RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, human

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAIN-208	ENST00000571043	RAB5B	P61020	215 aa		13.58	□□□□□ -0.24
RPAIN-208	ENST00000571043	ZNF343	Q6P1L6	599 aa		13.58	□□□□□ -0.24
RPAIN-208	ENST00000571043	C16orf82	Q7Z2V1	217 aa		13.58	□□□□□ -0.24
RPAIN-208	ENST00000571043	OR5T1	Q8NG75	326 aa		13.58	□□□□□ -0.24
RPAIN-208	ENST00000571043	PIFO	Q8TCI5	191 aa		13.58	□□□□□ -0.24
RPAIN-208	ENST00000571043		Q8WTZ3	238 aa		13.58	□□□□□ -0.24
RPAIN-208	ENST00000571043	TXN2	Q99757	166 aa		13.58	□□□□□ -0.24
RPAIN-208	ENST00000571043	TCEAL7	Q9BRU2	100 aa		13.58	□□□□□ -0.24
RPAIN-208	ENST00000571043	C21orf62	Q9NYP8	219 aa		13.58	□□□□□ -0.24
RPAIN-208	ENST00000571043	MRPL27	Q9P0M9	148 aa	Known RBP	13.58	□□□□□ -0.24
RPAIN-208	ENST00000571043	GNG7	O60262	68 aa		13.57	□□□□□ -0.24
RPAIN-208	ENST00000571043	HNF1A	P20823	631 aa		13.57	□□□□□ -0.24
RPAIN-208	ENST00000571043	LYZ	P61626	148 aa		13.57	□□□□□ -0.24
RPAIN-208	ENST00000571043	SUMO1	P63165	101 aa	Known RBP	13.57	□□□□□ -0.24
RPAIN-208	ENST00000571043	IL17REL	Q6ZVW7	336 aa		13.57	□□□□□ -0.24
RPAIN-208	ENST00000571043	C1QL4	Q86Z23	238 aa		13.57	□□□□□ -0.24
RPAIN-208	ENST00000571043	SOX21	Q9Y651	276 aa	Predicted RBP	13.57	□□□□□ -0.24
RPAIN-208	ENST00000571043	TRBV20OR9-2	A0A075B6H5	130 aa		13.56	□□□□□ -0.24
RPAIN-208	ENST00000571043	PPP1R2P9	O14990	202 aa		13.56	□□□□□ -0.24
RPAIN-208	ENST00000571043	ATP6V0E1	O15342	81 aa		13.56	□□□□□ -0.24
RPAIN-208	ENST00000571043	SCGB2A1	O75556	95 aa		13.56	□□□□□ -0.24
RPAIN-208	ENST00000571043	NDUFB8	O95169	186 aa		13.56	□□□□□ -0.24
RPAIN-208	ENST00000571043	CRYBB3	P26998	211 aa		13.56	□□□□□ -0.24
RPAIN-208	ENST00000571043	UNQ5815/PRO19632	Q6UWF5	114 aa		13.56	□□□□□ -0.24
RPAIN-208	ENST00000571043	BCL6B	Q8N143	479 aa	Predicted RBP	13.56	□□□□□ -0.24
RPAIN-208	ENST00000571043	VN1R17P	Q8TDU5	208 aa		13.56	□□□□□ -0.24
RPAIN-208	ENST00000571043	C2CD4C	Q8TF44	421 aa		13.56	□□□□□ -0.24
RPAIN-208	ENST00000571043	TMEM14C	Q9P0S9	112 aa		13.56	□□□□□ -0.24
RPAIN-208	ENST00000571043	URGCP-MRPS24	S4R325	110 aa		13.56	□□□□□ -0.24
RPAIN-208	ENST00000571043	TEP1	Q99973	2627 aa	Known RBP	13.56	□□□□□ -0.24
RPAIN-208	ENST00000571043	FN1	P02751	2386 aa	Known RBP	13.55	□□□□□ -0.24
RPAIN-208	ENST00000571043	TRBV24-1	A0A075B6N3	115 aa		13.55	□□□□□ -0.24
RPAIN-208	ENST00000571043	OR2J3	O76001	311 aa		13.55	□□□□□ -0.24
RPAIN-208	ENST00000571043	CXCL1	P09341	107 aa		13.55	□□□□□ -0.24
RPAIN-208	ENST00000571043	SRP14	P37108	136 aa	Known RBP	13.55	□□□□□ -0.24
RPAIN-208	ENST00000571043	RPL35	P42766	123 aa	Known RBP	13.55	□□□□□ -0.24
RPAIN-208	ENST00000571043	S100A7A	Q86SG5	101 aa		13.55	□□□□□ -0.24
RPAIN-208	ENST00000571043	OR5B12	Q96R08	314 aa		13.55	□□□□□ -0.24
RPAIN-208	ENST00000571043	SSX3	Q99909	188 aa		13.55	□□□□□ -0.24
RPAIN-208	ENST00000571043	ELOVL1	Q9BW60	279 aa		13.55	□□□□□ -0.24
RPAIN-208	ENST00000571043	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.55	□□□□□ -0.24
RPAIN-208	ENST00000571043	FBXL7	Q9UJT9	491 aa		13.55	□□□□□ -0.24
RPAIN-208	ENST00000571043	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	HELT	A6NFD8	242 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043		F8W735	103 aa	Predicted RBP	13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	PLXNB1	O43157	2135 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	TGOLN2	O43493	480 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	PFN1	P07737	140 aa	Known RBP	13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	GP9	P14770	177 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	CRIP2	P52943	208 aa	Predicted RBP	13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043		Q56UQ5	140 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043		Q71RC1	249 aa	Predicted RBP	13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	ZNF491	Q8N8L2	437 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	CDC42EP3	Q9UKI2	254 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	TGIF2-C20orf24	A0A0A6YYL0	155 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	NBEAP1	P0C6P0	100 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	S100P	P25815	95 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	MYCNOS	P40205	109 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	GALR1	P47211	349 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	ECSCR	Q19T08	205 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	ZNF329	Q86UD4	541 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	OCC1	Q8TAD7	63 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	TMEM190	Q8WZ59	177 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	FAM210B	Q96KR6	192 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	SHANK2-AS3	Q9BTD1	123 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	PRDM13	Q9H4Q3	707 aa		13.54	□□□□□ -0.24
RPAIN-208	ENST00000571043	TRBV9	A0A0B4J1U6	114 aa		13.53	□□□□□ -0.24
RPAIN-208	ENST00000571043	RPS10	P46783	165 aa	Known RBP	13.53	□□□□□ -0.24
RPAIN-208	ENST00000571043	TAS2R60	P59551	318 aa		13.53	□□□□□ -0.24
RPAIN-208	ENST00000571043	DEFB112	Q30KQ8	113 aa		13.53	□□□□□ -0.24
RPAIN-208	ENST00000571043	TMEM219	Q86XT9	240 aa		13.53	□□□□□ -0.24
RPAIN-208	ENST00000571043	RNF125	Q96EQ8	232 aa		13.53	□□□□□ -0.24
RPAIN-208	ENST00000571043	SFRP2	Q96HF1	295 aa		13.53	□□□□□ -0.24
RPAIN-208	ENST00000571043	IMMP2L	Q96T52	175 aa		13.53	□□□□□ -0.24
RPAIN-208	ENST00000571043	PYGO2	Q9BRQ0	406 aa		13.53	□□□□□ -0.24
RPAIN-208	ENST00000571043	MDFIC2	A0A1B0GVS7	189 aa		13.52	□□□□□ -0.25
RPAIN-208	ENST00000571043		A6NDX4	124 aa		13.52	□□□□□ -0.25
RPAIN-208	ENST00000571043		H3BRN7	92 aa		13.52	□□□□□ -0.25
RPAIN-208	ENST00000571043		M0QZK8	103 aa		13.52	□□□□□ -0.25
RPAIN-208	ENST00000571043	AMY1A	P04745	511 aa		13.52	□□□□□ -0.25
RPAIN-208	ENST00000571043	GNG4	P50150	75 aa		13.52	□□□□□ -0.25
RPAIN-208	ENST00000571043	BIN3	Q9NQY0	253 aa		13.52	□□□□□ -0.25
RPAIN-208	ENST00000571043	RNF24	Q9Y225	148 aa		13.52	□□□□□ -0.25
RPAIN-208	ENST00000571043	NIPBL	Q6KC79	2804 aa	eCLIP	13.51	□□□□□ -0.25
RPAIN-208	ENST00000571043	PGPEP1L	A6NFU8	196 aa		13.51	□□□□□ -0.25
RPAIN-208	ENST00000571043	INAFM1	C9JVW0	142 aa		13.51	□□□□□ -0.25
RPAIN-208	ENST00000571043	IL4	P05112	153 aa		13.51	□□□□□ -0.25
RPAIN-208	ENST00000571043	HIST1H1E	P10412	219 aa	Known RBP	13.51	□□□□□ -0.25
RPAIN-208	ENST00000571043	CENPW	Q5EE01	88 aa		13.51	□□□□□ -0.25
RPAIN-208	ENST00000571043	ZFP82	Q8N141	532 aa		13.51	□□□□□ -0.25
RPAIN-208	ENST00000571043	GAR1	Q9NY12	217 aa	Known RBP	13.51	□□□□□ -0.25
RPAIN-208	ENST00000571043	PITPNC1	Q9UKF7	332 aa		13.51	□□□□□ -0.25
RPAIN-208	ENST00000571043		S4R3C0	116 aa		13.51	□□□□□ -0.25
RPAIN-208	ENST00000571043	PEX7	O00628	323 aa		13.5	□□□□□ -0.25
RPAIN-208	ENST00000571043	C19orf54	Q5BKX5	351 aa		13.5	□□□□□ -0.25
RPAIN-208	ENST00000571043	TEX38	Q6PEX7	206 aa		13.5	□□□□□ -0.25
RPAIN-208	ENST00000571043	KCNIP4	Q6PIL6	250 aa		13.5	□□□□□ -0.25
RPAIN-208	ENST00000571043		Q6YL49	198 aa		13.5	□□□□□ -0.25
RPAIN-208	ENST00000571043	ZNF600	Q6ZNG1	722 aa		13.5	□□□□□ -0.25
RPAIN-208	ENST00000571043	NECAP1	Q8NC96	275 aa		13.5	□□□□□ -0.25

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