RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 IGHV3OR16-12A0A075B7B8 117 aa13.51□□□□□ -0.25
SCARF1-204ENST00000570902 A0A0B4J2A0 478 aa13.51□□□□□ -0.25
SCARF1-204ENST00000570902 A6NHS1 94 aa13.51□□□□□ -0.25
SCARF1-204ENST00000570902 IL7P13232 177 aa13.51□□□□□ -0.25
SCARF1-204ENST00000570902 VAMP1P23763 118 aa13.51□□□□□ -0.25
SCARF1-204ENST00000570902 NUP62P37198 522 aaPredicted RBP13.51□□□□□ -0.25
SCARF1-204ENST00000570902 SRPXP78539 464 aa13.51□□□□□ -0.25
SCARF1-204ENST00000570902 OXA1LQ15070 435 aa13.51□□□□□ -0.25
SCARF1-204ENST00000570902 C2orf83Q53S99 150 aa13.51□□□□□ -0.25
SCARF1-204ENST00000570902 TMEM128Q5BJH2 165 aa13.51□□□□□ -0.25
SCARF1-204ENST00000570902 FAM222AQ5U5X8 452 aa13.51□□□□□ -0.25
SCARF1-204ENST00000570902 ETFRF1Q6IPR1 90 aa13.51□□□□□ -0.25
SCARF1-204ENST00000570902 SHPKQ9UHJ6 478 aa13.51□□□□□ -0.25
SCARF1-204ENST00000570902 NAP1L6A6NFF2 107 aa13.5□□□□□ -0.25
SCARF1-204ENST00000570902 RD3LP0DJH9 198 aa13.5□□□□□ -0.25
SCARF1-204ENST00000570902 NMSQ5H8A3 153 aa13.5□□□□□ -0.25
SCARF1-204ENST00000570902 PFDN2Q9UHV9 154 aa13.5□□□□□ -0.25
SCARF1-204ENST00000570902 HSPG2P98160 4391 aa13.49□□□□□ -0.25
SCARF1-204ENST00000570902 TOMM40O96008 361 aa13.49□□□□□ -0.25
SCARF1-204ENST00000570902 IGKV3-20P01619 116 aa13.49□□□□□ -0.25
SCARF1-204ENST00000570902 HTN3P15516 51 aa13.49□□□□□ -0.25
SCARF1-204ENST00000570902 FAM3BP58499 235 aaPredicted RBP13.49□□□□□ -0.25
SCARF1-204ENST00000570902 SMCO1Q147U7 214 aa13.49□□□□□ -0.25
SCARF1-204ENST00000570902 CNPY1Q3B7I2 92 aa13.49□□□□□ -0.25
SCARF1-204ENST00000570902 FOXI2Q6ZQN5 318 aa13.49□□□□□ -0.25
SCARF1-204ENST00000570902 SLC24A4Q8NFF2 622 aa13.49□□□□□ -0.25
SCARF1-204ENST00000570902 CLUHP3Q96NS8 147 aa13.49□□□□□ -0.25
SCARF1-204ENST00000570902 SAV1Q9H4B6 383 aaPredicted RBP13.49□□□□□ -0.25
SCARF1-204ENST00000570902 CDK2AP2O75956 126 aa13.48□□□□□ -0.25
SCARF1-204ENST00000570902 ID1P41134 155 aa13.48□□□□□ -0.25
SCARF1-204ENST00000570902 FXYD7P58549 80 aa13.48□□□□□ -0.25
SCARF1-204ENST00000570902 PPP1R1AQ13522 171 aa13.48□□□□□ -0.25
SCARF1-204ENST00000570902 GDF5OSQ5U4N7 250 aa13.48□□□□□ -0.25
SCARF1-204ENST00000570902 NOXA1Q86UR1 476 aa13.48□□□□□ -0.25
SCARF1-204ENST00000570902 OR1S1Q8NH92 325 aa13.48□□□□□ -0.25
SCARF1-204ENST00000570902 NPIPB3Q92617 1050 aa13.48□□□□□ -0.25
SCARF1-204ENST00000570902 LINC00052Q96N35 136 aa13.48□□□□□ -0.25
SCARF1-204ENST00000570902 GOLT1BQ9Y3E0 138 aa13.48□□□□□ -0.25
SCARF1-204ENST00000570902 TMED3Q9Y3Q3 217 aa13.48□□□□□ -0.25
SCARF1-204ENST00000570902 CENPXA8MT69 81 aa13.47□□□□□ -0.25
SCARF1-204ENST00000570902 C16orf90A8MZG2 172 aa13.47□□□□□ -0.25
SCARF1-204ENST00000570902 NDUFB6O95139 128 aa13.47□□□□□ -0.25
SCARF1-204ENST00000570902 HBE1P02100 147 aa13.47□□□□□ -0.25
SCARF1-204ENST00000570902 SPATA31B1PQ5VZV4 182 aa13.47□□□□□ -0.25
SCARF1-204ENST00000570902 ZNF709Q8N972 641 aa13.47□□□□□ -0.25
SCARF1-204ENST00000570902 ACY3Q96HD9 319 aa13.47□□□□□ -0.25
SCARF1-204ENST00000570902 CACFD1Q9UGQ2 172 aa13.47□□□□□ -0.25
SCARF1-204ENST00000570902 SFT2D2O95562 160 aa13.46□□□□□ -0.25
SCARF1-204ENST00000570902 PSG1P11464 419 aa13.46□□□□□ -0.25
SCARF1-204ENST00000570902 BTCP35070 178 aa13.46□□□□□ -0.25
SCARF1-204ENST00000570902 PSMB3P49720 205 aa13.46□□□□□ -0.25
SCARF1-204ENST00000570902 TMEM88Q6PEY1 159 aa13.46□□□□□ -0.25
SCARF1-204ENST00000570902 C15orf53Q8NAA6 179 aa13.46□□□□□ -0.25
SCARF1-204ENST00000570902 OR4B1Q8NGF8 309 aa13.46□□□□□ -0.25
SCARF1-204ENST00000570902 COQ8AQ8NI60 647 aa13.46□□□□□ -0.25
SCARF1-204ENST00000570902 C7orf50Q9BRJ6 194 aaKnown RBP13.46□□□□□ -0.25
SCARF1-204ENST00000570902 RBKSQ9H477 322 aa13.46□□□□□ -0.25
SCARF1-204ENST00000570902 HSPB7Q9UBY9 170 aa13.46□□□□□ -0.25
SCARF1-204ENST00000570902 FLVCR2Q9UPI3 526 aa13.46□□□□□ -0.25
SCARF1-204ENST00000570902 PIGBOS1A0A0B4J2F0 54 aa13.45□□□□□ -0.26
SCARF1-204ENST00000570902 LOC102723971A0A1B0GUV8 181 aa13.45□□□□□ -0.26
SCARF1-204ENST00000570902 DUXBA0A1W2PPF3 345 aa13.45□□□□□ -0.26
SCARF1-204ENST00000570902 OR8G2PQ6IF36 304 aa13.45□□□□□ -0.26
SCARF1-204ENST00000570902 LRTM2Q8N967 370 aa13.45□□□□□ -0.26
SCARF1-204ENST00000570902 OR51G1Q8NGK1 321 aa13.45□□□□□ -0.26
SCARF1-204ENST00000570902 DTD1Q8TEA8 209 aa13.45□□□□□ -0.26
SCARF1-204ENST00000570902 TMEM170AQ8WVE7 144 aa13.45□□□□□ -0.26
SCARF1-204ENST00000570902 RNF125Q96EQ8 232 aa13.45□□□□□ -0.26
SCARF1-204ENST00000570902 YTHDF2Q9Y5A9 579 aaKnown RBP13.45□□□□□ -0.26
SCARF1-204ENST00000570902 PLA2G10O15496 165 aa13.44□□□□□ -0.26
SCARF1-204ENST00000570902 DEFB1P60022 68 aa13.44□□□□□ -0.26
SCARF1-204ENST00000570902 UBE2MP61081 183 aaKnown RBP13.44□□□□□ -0.26
SCARF1-204ENST00000570902 DAD1P61803 113 aa13.44□□□□□ -0.26
SCARF1-204ENST00000570902 PSG9Q00887 426 aa13.44□□□□□ -0.26
SCARF1-204ENST00000570902 RRN3P1Q2M238 152 aa13.44□□□□□ -0.26
SCARF1-204ENST00000570902 EBLN2Q6P2I7 272 aa13.44□□□□□ -0.26
SCARF1-204ENST00000570902 LINC00299Q6ZSB3 139 aa13.44□□□□□ -0.26
SCARF1-204ENST00000570902 MAPKAPK5-AS1Q8N8E1 139 aa13.44□□□□□ -0.26
SCARF1-204ENST00000570902 ATG101Q9BSB4 218 aa13.44□□□□□ -0.26
SCARF1-204ENST00000570902 WDR12Q9GZL7 423 aaKnown RBP13.44□□□□□ -0.26
SCARF1-204ENST00000570902 HOXB5P09067 269 aa13.43□□□□□ -0.26
SCARF1-204ENST00000570902 GSG1LQ6UXU4 331 aa13.43□□□□□ -0.26
SCARF1-204ENST00000570902 PBDC1Q9BVG4 233 aa13.43□□□□□ -0.26
SCARF1-204ENST00000570902 SLC35B3Q9H1N7 401 aa13.43□□□□□ -0.26
SCARF1-204ENST00000570902 U3KQ87 197 aa13.43□□□□□ -0.26
SCARF1-204ENST00000570902 NACAE9PAV3 2078 aa13.43□□□□□ -0.26
SCARF1-204ENST00000570902 C9orf170A2RU37 121 aa13.42□□□□□ -0.26
SCARF1-204ENST00000570902 ANXA7P20073 488 aaKnown RBP13.42□□□□□ -0.26
SCARF1-204ENST00000570902 PAX9P55771 341 aa13.42□□□□□ -0.26
SCARF1-204ENST00000570902 TNP2Q05952 138 aa13.42□□□□□ -0.26
SCARF1-204ENST00000570902 C1orf194Q5T5A4 169 aa13.42□□□□□ -0.26
SCARF1-204ENST00000570902 SAMD13Q5VXD3 122 aa13.42□□□□□ -0.26
SCARF1-204ENST00000570902 C1orf158Q8N1D5 194 aa13.42□□□□□ -0.26
SCARF1-204ENST00000570902 CCDC32Q9BV29 185 aa13.42□□□□□ -0.26
SCARF1-204ENST00000570902 ISLRO14498 428 aa13.41□□□□□ -0.26
SCARF1-204ENST00000570902 SOCS3O14543 225 aa13.41□□□□□ -0.26
SCARF1-204ENST00000570902 LYRM1O43325 122 aa13.41□□□□□ -0.26
SCARF1-204ENST00000570902 PITX3O75364 302 aa13.41□□□□□ -0.26
SCARF1-204ENST00000570902 IAPPP10997 89 aa13.41□□□□□ -0.26
SCARF1-204ENST00000570902 FAM78BQ5VT40 261 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms