RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 LINC01619G3V211 115 aa13.9□□□□□ -0.18
SPNS2-202ENST00000570641 H2AFB1P0C5Y9 115 aa13.9□□□□□ -0.18
SPNS2-202ENST00000570641 USF2Q15853 346 aaPredicted RBP13.9□□□□□ -0.18
SPNS2-202ENST00000570641 KRTAP24-1Q3LI83 254 aa13.9□□□□□ -0.18
SPNS2-202ENST00000570641 AWAT1Q58HT5 328 aa13.9□□□□□ -0.18
SPNS2-202ENST00000570641 GPHB5Q86YW7 130 aa13.9□□□□□ -0.18
SPNS2-202ENST00000570641 RAB24Q969Q5 203 aa13.9□□□□□ -0.18
SPNS2-202ENST00000570641 PFDN2Q9UHV9 154 aa13.9□□□□□ -0.18
SPNS2-202ENST00000570641 A0A1W2PRX2 142 aa13.89□□□□□ -0.19
SPNS2-202ENST00000570641 TEX46H3BTG2 121 aa13.89□□□□□ -0.19
SPNS2-202ENST00000570641 HBE1P02100 147 aa13.89□□□□□ -0.19
SPNS2-202ENST00000570641 NMBP08949 121 aa13.89□□□□□ -0.19
SPNS2-202ENST00000570641 TAS2R45P59539 299 aa13.89□□□□□ -0.19
SPNS2-202ENST00000570641 ZNF726P1Q15940 193 aa13.89□□□□□ -0.19
SPNS2-202ENST00000570641 LINC00305Q7Z4B0 112 aa13.89□□□□□ -0.19
SPNS2-202ENST00000570641 OR1N2Q8NGR9 330 aa13.89□□□□□ -0.19
SPNS2-202ENST00000570641 MBD3L1Q8WWY6 194 aa13.89□□□□□ -0.19
SPNS2-202ENST00000570641 TMEM190Q8WZ59 177 aa13.89□□□□□ -0.19
SPNS2-202ENST00000570641 SEPSECSQ9HD40 501 aaKnown RBP13.89□□□□□ -0.19
SPNS2-202ENST00000570641 RNF24Q9Y225 148 aa13.89□□□□□ -0.19
SPNS2-202ENST00000570641 JMJD1CQ15652 2540 aa13.89□□□□□ -0.19
SPNS2-202ENST00000570641 MAP1LC3B2A6NCE7 125 aa13.88□□□□□ -0.19
SPNS2-202ENST00000570641 KRTAP10-3P60369 221 aa13.88□□□□□ -0.19
SPNS2-202ENST00000570641 C8orf86Q6ZUL3 223 aa13.88□□□□□ -0.19
SPNS2-202ENST00000570641 MIR17HGQ75NE6 70 aa13.88□□□□□ -0.19
SPNS2-202ENST00000570641 NDUFA11Q86Y39 141 aa13.88□□□□□ -0.19
SPNS2-202ENST00000570641 OR11H1Q8NG94 326 aa13.88□□□□□ -0.19
SPNS2-202ENST00000570641 PCNPQ8WW12 178 aaKnown RBP13.88□□□□□ -0.19
SPNS2-202ENST00000570641 UHRF2Q96PU4 802 aa13.88□□□□□ -0.19
SPNS2-202ENST00000570641 METTL26Q96S19 204 aa13.88□□□□□ -0.19
SPNS2-202ENST00000570641 C20orf24Q9BUV8 137 aa13.88□□□□□ -0.19
SPNS2-202ENST00000570641 SLC25A39Q9BZJ4 359 aaPredicted RBP13.88□□□□□ -0.19
SPNS2-202ENST00000570641 MAP1LC3BQ9GZQ8 125 aa13.88□□□□□ -0.19
SPNS2-202ENST00000570641 TECRQ9NZ01 308 aaKnown RBP13.88□□□□□ -0.19
SPNS2-202ENST00000570641 ZNF320A2RRD8 509 aa13.87□□□□□ -0.19
SPNS2-202ENST00000570641 H3BRN7 92 aa13.87□□□□□ -0.19
SPNS2-202ENST00000570641 C8orf88P0DMB2 117 aa13.87□□□□□ -0.19
SPNS2-202ENST00000570641 HOXD3P31249 432 aaPredicted RBP13.87□□□□□ -0.19
SPNS2-202ENST00000570641 DEFB136Q30KP8 78 aa13.87□□□□□ -0.19
SPNS2-202ENST00000570641 SPATA31B1PQ5VZV4 182 aa13.87□□□□□ -0.19
SPNS2-202ENST00000570641 LCN15Q6UWW0 184 aa13.87□□□□□ -0.19
SPNS2-202ENST00000570641 REC114Q7Z4M0 266 aa13.87□□□□□ -0.19
SPNS2-202ENST00000570641 SFT2D1Q8WV19 159 aa13.87□□□□□ -0.19
SPNS2-202ENST00000570641 NARS2Q96I59 477 aaKnown RBP13.87□□□□□ -0.19
SPNS2-202ENST00000570641 MDFIQ99750 246 aa13.87□□□□□ -0.19
SPNS2-202ENST00000570641 SHANK2-AS3Q9BTD1 123 aa13.87□□□□□ -0.19
SPNS2-202ENST00000570641 UFC1Q9Y3C8 167 aa13.87□□□□□ -0.19
SPNS2-202ENST00000570641 CUBNO60494 3623 aa13.87□□□□□ -0.19
SPNS2-202ENST00000570641 IGHV3OR16-8A0A075B7F1 116 aa13.86□□□□□ -0.19
SPNS2-202ENST00000570641 TRAV1-1A0A0B4J248 108 aa13.86□□□□□ -0.19
SPNS2-202ENST00000570641 K7EMT4 169 aa13.86□□□□□ -0.19
SPNS2-202ENST00000570641 LGALS9O00182 355 aa13.86□□□□□ -0.19
SPNS2-202ENST00000570641 STAG3L2P0CL84 134 aa13.86□□□□□ -0.19
SPNS2-202ENST00000570641 STAG3L3P0CL85 134 aa13.86□□□□□ -0.19
SPNS2-202ENST00000570641 NPPCP23582 126 aa13.86□□□□□ -0.19
SPNS2-202ENST00000570641 KHDC3LQ587J8 217 aa13.86□□□□□ -0.19
SPNS2-202ENST00000570641 HIST2H2BDQ6DRA6 164 aa13.86□□□□□ -0.19
SPNS2-202ENST00000570641 UNQ9165/PRO28630Q6UXU0 137 aa13.86□□□□□ -0.19
SPNS2-202ENST00000570641 SSX7Q7RTT5 188 aa13.86□□□□□ -0.19
SPNS2-202ENST00000570641 C1QL4Q86Z23 238 aa13.86□□□□□ -0.19
SPNS2-202ENST00000570641 HMGB3O15347 200 aaKnown RBP13.85□□□□□ -0.19
SPNS2-202ENST00000570641 CXorf1O96002 111 aa13.85□□□□□ -0.19
SPNS2-202ENST00000570641 NSUN5P1Q3KNT7 163 aa13.85□□□□□ -0.19
SPNS2-202ENST00000570641 LYPD6BQ8NI32 183 aa13.85□□□□□ -0.19
SPNS2-202ENST00000570641 HRH4Q9H3N8 390 aa13.85□□□□□ -0.19
SPNS2-202ENST00000570641 ZNF98A6NK75 572 aa13.84□□□□□ -0.19
SPNS2-202ENST00000570641 ADARB2-AS1A8MUL3 147 aa13.84□□□□□ -0.19
SPNS2-202ENST00000570641 CCL24O00175 119 aa13.84□□□□□ -0.19
SPNS2-202ENST00000570641 ZNF207O43670 478 aaKnown RBP13.84□□□□□ -0.19
SPNS2-202ENST00000570641 CRYBB3P26998 211 aa13.84□□□□□ -0.19
SPNS2-202ENST00000570641 SLURP1P55000 103 aa13.84□□□□□ -0.19
SPNS2-202ENST00000570641 KLF5Q13887 457 aaPredicted RBP13.84□□□□□ -0.19
SPNS2-202ENST00000570641 MORN5Q5VZ52 161 aa13.84□□□□□ -0.19
SPNS2-202ENST00000570641 PQLC2Q6ZP29 291 aa13.84□□□□□ -0.19
SPNS2-202ENST00000570641 STXBP6Q8NFX7 210 aa13.84□□□□□ -0.19
SPNS2-202ENST00000570641 TMEM158Q8WZ71 300 aa13.84□□□□□ -0.19
SPNS2-202ENST00000570641 RAX2Q96IS3 184 aa13.84□□□□□ -0.19
SPNS2-202ENST00000570641 SCRT1Q9BWW7 348 aa13.84□□□□□ -0.19
SPNS2-202ENST00000570641 DAZ1Q9NQZ3 744 aaKnown RBP13.84□□□□□ -0.19
SPNS2-202ENST00000570641 TRAV5A0A0B4J249 113 aa13.83□□□□□ -0.2
SPNS2-202ENST00000570641 A8MWP6 167 aa13.83□□□□□ -0.2
SPNS2-202ENST00000570641 EIF3GO75821 320 aaKnown RBP eCLIP13.83□□□□□ -0.2
SPNS2-202ENST00000570641 ARL14EPLP0DKL9 152 aa13.83□□□□□ -0.2
SPNS2-202ENST00000570641 FGF8P55075 233 aaPredicted RBP13.83□□□□□ -0.2
SPNS2-202ENST00000570641 SYNJ2BPP57105 145 aa13.83□□□□□ -0.2
SPNS2-202ENST00000570641 FHL3Q13643 280 aa13.83□□□□□ -0.2
SPNS2-202ENST00000570641 FAM167A-AS1Q96KT0 104 aa13.83□□□□□ -0.2
SPNS2-202ENST00000570641 DUX3Q96PT4 197 aa13.83□□□□□ -0.2
SPNS2-202ENST00000570641 CITED1Q99966 193 aa13.83□□□□□ -0.2
SPNS2-202ENST00000570641 SLC25A2Q9BXI2 301 aa13.83□□□□□ -0.2
SPNS2-202ENST00000570641 U3KQE9 123 aa13.83□□□□□ -0.2
SPNS2-202ENST00000570641 A0A1B0GV50 99 aa13.82□□□□□ -0.2
SPNS2-202ENST00000570641 A0A1W2PS18 150 aa13.82□□□□□ -0.2
SPNS2-202ENST00000570641 OR7C2O60412 319 aa13.82□□□□□ -0.2
SPNS2-202ENST00000570641 BMI1P35226 326 aa13.82□□□□□ -0.2
SPNS2-202ENST00000570641 MYCNOSP40205 109 aa13.82□□□□□ -0.2
SPNS2-202ENST00000570641 C1orf194Q5T5A4 169 aa13.82□□□□□ -0.2
SPNS2-202ENST00000570641 IL34Q6ZMJ4 242 aa13.82□□□□□ -0.2
SPNS2-202ENST00000570641 IQCF2Q8IXL9 164 aa13.82□□□□□ -0.2
SPNS2-202ENST00000570641 GRAMD2BQ96HH9 432 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms