RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 HOXA4Q00056 320 aaPredicted RBP6.45□□□□□ -1.38
TCF4-246ENST00000570287 Q6ZS92 163 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 DOLPP1Q86YN1 238 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 CD177Q8N6Q3 437 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 ZNF439Q8NDP4 499 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 OR1N2Q8NGR9 330 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 SIGMAR1Q99720 223 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 EP300Q09472 2414 aaPredicted RBP6.45□□□□□ -1.38
TCF4-246ENST00000570287 FAM181BA6NEQ2 426 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 C15orf65H3BRN8 121 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 CLDN14O95500 239 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 CLDN1O95832 211 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 IGHV3-13P01766 116 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 SPANXN5Q5MJ07 72 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 H2BFWTQ7Z2G1 175 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 NEGR1Q7Z3B1 354 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 OR1B1Q8NGR6 318 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 BORCS7Q96B45 105 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 HSD17B10Q99714 261 aaKnown RBP6.45□□□□□ -1.38
TCF4-246ENST00000570287 IGLV1-40P01703 118 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 TFF1P04155 84 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 G6PCP35575 357 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 ZNF816Q0VGE8 651 aaPredicted RBP6.45□□□□□ -1.38
TCF4-246ENST00000570287 FAM53AQ6NSI3 398 aaPredicted RBP6.45□□□□□ -1.38
TCF4-246ENST00000570287 EBLN2Q6P2I7 272 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 C12orf54Q6X4T0 127 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 Q71RC1 249 aaPredicted RBP6.45□□□□□ -1.38
TCF4-246ENST00000570287 FER1L6-AS1Q8NA97 138 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 OR52E5Q8NH55 327 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 TMEM204Q9BSN7 226 aa6.45□□□□□ -1.38
TCF4-246ENST00000570287 ZFHX4Q86UP3 3567 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 TRGV10A0A0A0MS01 117 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 C17orf98A8MV24 154 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 SLC17A3O00476 420 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 MGST3O14880 152 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 GLRXP35754 106 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 BRWD1-AS2P59051 145 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 TFF3Q07654 80 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 GAGE5Q13069 117 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 GAGE6Q13070 117 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 KLF5Q13887 457 aaPredicted RBP6.44□□□□□ -1.38
TCF4-246ENST00000570287 LCN12Q6JVE5 192 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 ATOH7Q8N100 152 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 MRAPQ8TCY5 172 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 FAM215AQ9Y5M1 114 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 IGKV1D-17A0A075B6S4 117 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 M0R1B8 84 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 RHODO00212 210 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 HLA-DQA1P01909 254 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 TPRX1Q8N7U7 411 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 COMMD5Q9GZQ3 224 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 NAT8BQ9UHF3 227 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 LOC400499M0QZD8 3231 aa6.44□□□□□ -1.38
TCF4-246ENST00000570287 HEATR1Q9H583 2144 aaKnown RBP6.44□□□□□ -1.38
TCF4-246ENST00000570287 PRR14LQ5THK1 2151 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 TRAV8-6A0A0B4J262 113 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 SCO2A0A1W2PP80 73 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 GPR6P46095 362 aaPredicted RBP6.43□□□□□ -1.38
TCF4-246ENST00000570287 THBS3P49746 956 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 GCSAMQ8N6F7 178 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 RFESDQ8TAC1 157 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 C18orf32Q8TCD1 76 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 SPENQ96T58 3664 aaKnown RBP6.43□□□□□ -1.38
TCF4-246ENST00000570287 IGHV3-43A0A0B4J1X8 118 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 MUC21A0A0G2JKD1 596 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 MUC21A0A140T8X8 626 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 LINC00473A8K010 186 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 IGHV3-43DP0DP04 118 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 SRIP30626 198 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 EDDM3AQ14507 147 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 MUC21Q5SSG8 566 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 SPATA12Q7Z6I5 190 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 ZNF843Q8N446 348 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 ZNF835Q9Y2P0 537 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 IGLV3-9A0A075B6K5 115 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 A0A087WX48 190 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 SMIM27A0A1W2PRY6 76 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 SMIM9A6NGZ8 99 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 M0R1X1 148 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 LHBP01229 141 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 SMIM17P0DL12 118 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 UBE2G1P62253 170 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 LTC4SQ16873 150 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 RASL11AQ6T310 242 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 FAM19A2Q8N3H0 131 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 RBMXL3Q8N7X1 1067 aaKnown RBP6.43□□□□□ -1.38
TCF4-246ENST00000570287 PRR26Q8N8Z3 221 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 DCTN5Q9BTE1 182 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 PPDPFQ9H3Y8 114 aa6.43□□□□□ -1.38
TCF4-246ENST00000570287 DEFB108AA8MXU0 73 aa6.42□□□□□ -1.38
TCF4-246ENST00000570287 NDUFS7O75251 213 aa6.42□□□□□ -1.38
TCF4-246ENST00000570287 NUDT3O95989 172 aa6.42□□□□□ -1.38
TCF4-246ENST00000570287 DEFA4P12838 97 aa6.42□□□□□ -1.38
TCF4-246ENST00000570287 FAM120AOSQ5T036 256 aa6.42□□□□□ -1.38
TCF4-246ENST00000570287 OR8I2Q8N0Y5 310 aa6.42□□□□□ -1.38
TCF4-246ENST00000570287 SCRT2Q9NQ03 307 aa6.42□□□□□ -1.38
TCF4-246ENST00000570287 WASHC3Q9Y3C0 194 aa6.42□□□□□ -1.38
TCF4-246ENST00000570287 USF3Q68DE3 2245 aa6.42□□□□□ -1.38
TCF4-246ENST00000570287 CNOT1A5YKK6 2376 aaKnown RBP6.42□□□□□ -1.38
TCF4-246ENST00000570287 CUL9Q8IWT3 2517 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms