RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 IL17DQ8TAD2 202 aa9.55□□□□□ -0.88
CNOT1-220ENST00000569916 SEPSECSQ9HD40 501 aaKnown RBP9.55□□□□□ -0.88
CNOT1-220ENST00000569916 C5orf51A6NDU8 294 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 FNDC10F2Z333 226 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 K7EPK0 472 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 IL5P05113 134 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 RRAS2P62070 204 aaPredicted RBP9.54□□□□□ -0.88
CNOT1-220ENST00000569916 EWSR1Q01844 656 aaKnown RBP eCLIP9.54□□□□□ -0.88
CNOT1-220ENST00000569916 ARL16Q0P5N6 197 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 ENKURQ8TC29 256 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 GATAD1Q8WUU5 269 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 PPP1R14BQ96C90 147 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 C11orf1Q9H5F2 150 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 BATF3Q9NR55 127 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 FBXL17Q9UF56 701 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 SLC45A2Q9UMX9 530 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 SACSQ9NZJ4 4579 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 RYR2Q92736 4967 aa9.54□□□□□ -0.88
CNOT1-220ENST00000569916 SOCS3O14543 225 aa9.53□□□□□ -0.88
CNOT1-220ENST00000569916 GIG44P09565 113 aaPredicted RBP9.53□□□□□ -0.88
CNOT1-220ENST00000569916 C4BPBP20851 252 aa9.53□□□□□ -0.88
CNOT1-220ENST00000569916 SNRPD3P62318 126 aaKnown RBP9.53□□□□□ -0.88
CNOT1-220ENST00000569916 ACTL10Q5JWF8 245 aa9.53□□□□□ -0.88
CNOT1-220ENST00000569916 CYP2G1PQ6ZSU1 146 aa9.53□□□□□ -0.88
CNOT1-220ENST00000569916 OR10P1Q8NGE3 313 aa9.53□□□□□ -0.88
CNOT1-220ENST00000569916 C2orf50Q96LR7 162 aa9.53□□□□□ -0.88
CNOT1-220ENST00000569916 LYSTQ99698 3801 aa9.53□□□□□ -0.88
CNOT1-220ENST00000569916 SLC25A32Q9H2D1 315 aa9.53□□□□□ -0.88
CNOT1-220ENST00000569916 LSM5Q9Y4Y9 91 aaKnown RBP9.53□□□□□ -0.88
CNOT1-220ENST00000569916 SPP1P10451 314 aa9.52□□□□□ -0.89
CNOT1-220ENST00000569916 ORM2P19652 201 aa9.52□□□□□ -0.89
CNOT1-220ENST00000569916 IL15RAQ13261 267 aa9.52□□□□□ -0.89
CNOT1-220ENST00000569916 GSG1LQ6UXU4 331 aa9.52□□□□□ -0.89
CNOT1-220ENST00000569916 NRARPQ7Z6K4 114 aa9.52□□□□□ -0.89
CNOT1-220ENST00000569916 OR8I2Q8N0Y5 310 aa9.52□□□□□ -0.89
CNOT1-220ENST00000569916 OR1B1Q8NGR6 318 aa9.52□□□□□ -0.89
CNOT1-220ENST00000569916 NPVFQ9HCQ7 196 aa9.52□□□□□ -0.89
CNOT1-220ENST00000569916 MGAT4CQ9UBM8 478 aa9.52□□□□□ -0.89
CNOT1-220ENST00000569916 TENM2Q9NT68 2774 aa9.52□□□□□ -0.89
CNOT1-220ENST00000569916 ZNF98A6NK75 572 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 H3BRN7 92 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 L7N2F9 121 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 LINC00869P0C866 280 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 ATF4P18848 351 aaPredicted RBP9.51□□□□□ -0.89
CNOT1-220ENST00000569916 PSMB3P49720 205 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 PLP1P60201 277 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 VAMP2P63027 116 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 SLC38A11Q08AI6 406 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 MORN3Q6PF18 240 aaPredicted RBP9.51□□□□□ -0.89
CNOT1-220ENST00000569916 OR11H2Q8NH07 326 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 C17orf77Q96MU5 243 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 RARRES2Q99969 163 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 TMEM147Q9BVK8 224 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 SLC25A22Q9H936 323 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 DOK5Q9P104 306 aa9.51□□□□□ -0.89
CNOT1-220ENST00000569916 LCE6AA0A183 80 aa9.5□□□□□ -0.89
CNOT1-220ENST00000569916 H3BMM0 161 aa9.5□□□□□ -0.89
CNOT1-220ENST00000569916 DEDDO75618 318 aa9.5□□□□□ -0.89
CNOT1-220ENST00000569916 HLA-DRB4P13762 266 aa9.5□□□□□ -0.89
CNOT1-220ENST00000569916 CAV2P51636 162 aa9.5□□□□□ -0.89
CNOT1-220ENST00000569916 S100A10P60903 97 aa9.5□□□□□ -0.89
CNOT1-220ENST00000569916 SELENOTP62341 195 aa9.5□□□□□ -0.89
CNOT1-220ENST00000569916 RAB32Q13637 225 aa9.5□□□□□ -0.89
CNOT1-220ENST00000569916 TMEM41BQ5BJD5 291 aa9.5□□□□□ -0.89
CNOT1-220ENST00000569916 TEPPQ6URK8 271 aa9.5□□□□□ -0.89
CNOT1-220ENST00000569916 GGACTQ9BVM4 153 aa9.5□□□□□ -0.89
CNOT1-220ENST00000569916 SCRT1Q9BWW7 348 aa9.5□□□□□ -0.89
CNOT1-220ENST00000569916 SLC25A39Q9BZJ4 359 aaPredicted RBP9.5□□□□□ -0.89
CNOT1-220ENST00000569916 GPN1Q9HCN4 374 aaPredicted RBP9.5□□□□□ -0.89
CNOT1-220ENST00000569916 HLA-DRB4X5D2U9 266 aa9.5□□□□□ -0.89
CNOT1-220ENST00000569916 FAM24AA6NFZ4 105 aa9.49□□□□□ -0.89
CNOT1-220ENST00000569916 PRAF2O60831 178 aa9.49□□□□□ -0.89
CNOT1-220ENST00000569916 PVALBP20472 110 aaPredicted RBP9.49□□□□□ -0.89
CNOT1-220ENST00000569916 ID1P41134 155 aa9.49□□□□□ -0.89
CNOT1-220ENST00000569916 GALR1P47211 349 aa9.49□□□□□ -0.89
CNOT1-220ENST00000569916 BCAP31P51572 246 aa9.49□□□□□ -0.89
CNOT1-220ENST00000569916 DEFB1P60022 68 aa9.49□□□□□ -0.89
CNOT1-220ENST00000569916 RAP2BP61225 183 aa9.49□□□□□ -0.89
CNOT1-220ENST00000569916 GDF5OSQ5U4N7 250 aa9.49□□□□□ -0.89
CNOT1-220ENST00000569916 LINC00052Q96N35 136 aa9.49□□□□□ -0.89
CNOT1-220ENST00000569916 GPR82Q96P67 336 aa9.49□□□□□ -0.89
CNOT1-220ENST00000569916 SHANK2-AS3Q9BTD1 123 aa9.49□□□□□ -0.89
CNOT1-220ENST00000569916 C11orf68Q9H3H3 251 aaKnown RBP9.49□□□□□ -0.89
CNOT1-220ENST00000569916 LYRM2Q9NU23 88 aaPredicted RBP9.49□□□□□ -0.89
CNOT1-220ENST00000569916 HIGD1AQ9Y241 93 aa9.49□□□□□ -0.89
CNOT1-220ENST00000569916 PLECQ15149 4684 aaKnown RBP9.48□□□□□ -0.89
CNOT1-220ENST00000569916 INMT-MINDY4F8WBC2 141 aa9.48□□□□□ -0.89
CNOT1-220ENST00000569916 ISLRO14498 428 aa9.48□□□□□ -0.89
CNOT1-220ENST00000569916 GOSR2O14653 212 aa9.48□□□□□ -0.89
CNOT1-220ENST00000569916 AGPAT2O15120 278 aa9.48□□□□□ -0.89
CNOT1-220ENST00000569916 HYPMO75409 117 aa9.48□□□□□ -0.89
CNOT1-220ENST00000569916 CST7O76096 145 aa9.48□□□□□ -0.89
CNOT1-220ENST00000569916 OR5G3P0C626 314 aa9.48□□□□□ -0.89
CNOT1-220ENST00000569916 S100A7P31151 101 aa9.48□□□□□ -0.89
CNOT1-220ENST00000569916 MEOX2P50222 304 aa9.48□□□□□ -0.89
CNOT1-220ENST00000569916 PMS2P11Q13670 270 aa9.48□□□□□ -0.89
CNOT1-220ENST00000569916 SAMD13Q5VXD3 122 aa9.48□□□□□ -0.89
CNOT1-220ENST00000569916 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.48□□□□□ -0.89
CNOT1-220ENST00000569916 FOXI2Q6ZQN5 318 aa9.48□□□□□ -0.89
CNOT1-220ENST00000569916 ZNF546Q86UE3 836 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms