RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 MZT2AQ6P582 158 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 BAP18Q8IXM2 172 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 LGI3Q8N145 548 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 OR4C16Q8NGL9 310 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 DTD1Q8TEA8 209 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 C16orf92Q96LL3 132 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 C17orf77Q96MU5 243 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 SLC25A32Q9H2D1 315 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 MIXL1Q9H2W2 232 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 SLC25A22Q9H936 323 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 TRAV12-2A0A075B6T6 113 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 NBDYA0A0U1RRE5 68 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 F5H768 121 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 IAPPP10997 89 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 AZU1P20160 251 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 PAX9P55771 341 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 OXA1LQ15070 435 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 OR8G2PQ6IF36 304 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 AMTNQ6UX39 209 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 LYZL2Q7Z4W2 148 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 OR8I2Q8N0Y5 310 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 C6orf223Q8N319 242 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 RNF182Q8N6D2 247 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 ZNRF2Q8NHG8 242 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 SLC35E1Q96K37 410 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 DOK5Q9P104 306 aa8.47□□□□□ -1.05
CAPN3-220ENST00000569827 PAIP2BQ9ULR5 123 aaKnown RBP8.47□□□□□ -1.05
CAPN3-220ENST00000569827 IGKV1OR2-108A0A075B7D4 117 aa8.46□□□□□ -1.06
CAPN3-220ENST00000569827 ISLRO14498 428 aa8.46□□□□□ -1.06
CAPN3-220ENST00000569827 CRXO43186 299 aaPredicted RBP8.46□□□□□ -1.06
CAPN3-220ENST00000569827 B3GALNT1O75752 331 aa8.46□□□□□ -1.06
CAPN3-220ENST00000569827 CDK2AP2O75956 126 aa8.46□□□□□ -1.06
CAPN3-220ENST00000569827 GATA2P23769 480 aaPredicted RBP8.46□□□□□ -1.06
CAPN3-220ENST00000569827 OR11H7Q8NGC8 314 aa8.46□□□□□ -1.06
CAPN3-220ENST00000569827 OR51S1Q8NGJ8 323 aa8.46□□□□□ -1.06
CAPN3-220ENST00000569827 IGF2BP2-AS1Q96M15 143 aa8.46□□□□□ -1.06
CAPN3-220ENST00000569827 RSG1Q9BU20 258 aa8.46□□□□□ -1.06
CAPN3-220ENST00000569827 RPRMQ9NS64 109 aa8.46□□□□□ -1.06
CAPN3-220ENST00000569827 HSPB7Q9UBY9 170 aa8.46□□□□□ -1.06
CAPN3-220ENST00000569827 GPR132Q9UNW8 380 aa8.46□□□□□ -1.06
CAPN3-220ENST00000569827 TMEM56-RWDD3S4R434 201 aa8.46□□□□□ -1.06
CAPN3-220ENST00000569827 DISC1C4P0D8 188 aa8.45□□□□□ -1.06
CAPN3-220ENST00000569827 GABARAPH6UMI1 98 aa8.45□□□□□ -1.06
CAPN3-220ENST00000569827 GABARAPO95166 117 aa8.45□□□□□ -1.06
CAPN3-220ENST00000569827 NUP62P37198 522 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-220ENST00000569827 CNN1P51911 297 aaKnown RBP8.45□□□□□ -1.06
CAPN3-220ENST00000569827 SMCO1Q147U7 214 aa8.45□□□□□ -1.06
CAPN3-220ENST00000569827 CTF1Q16619 201 aa8.45□□□□□ -1.06
CAPN3-220ENST00000569827 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.45□□□□□ -1.06
CAPN3-220ENST00000569827 TMEM182Q6ZP80 229 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-220ENST00000569827 SPATA12Q7Z6I5 190 aa8.45□□□□□ -1.06
CAPN3-220ENST00000569827 C15orf53Q8NAA6 179 aa8.45□□□□□ -1.06
CAPN3-220ENST00000569827 CLUHP3Q96NS8 147 aa8.45□□□□□ -1.06
CAPN3-220ENST00000569827 SLC25A39Q9BZJ4 359 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-220ENST00000569827 LINC00588Q9Y4M8 146 aa8.45□□□□□ -1.06
CAPN3-220ENST00000569827 U3KQ87 197 aa8.45□□□□□ -1.06
CAPN3-220ENST00000569827 TRAV8-2A0A0B4J237 113 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 PLAC8L1A1L4L8 177 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 SNRPGP15A8MWD9 76 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 CTDSP2O14595 271 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 RGS5O15539 181 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 HTN1P15515 57 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 ZNF182P17025 639 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-220ENST00000569827 AKR1C4P17516 323 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 FGL1Q08830 312 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 NOXA1Q86UR1 476 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 CLVS1Q8IUQ0 354 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-220ENST00000569827 OR1S1Q8NH92 325 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 RNF141Q8WVD5 230 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 AP3S1Q92572 193 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 UHRF2Q96PU4 802 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 KRTAP1-5Q9BYS1 174 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 SCRT2Q9NQ03 307 aa8.44□□□□□ -1.06
CAPN3-220ENST00000569827 A8MTW9 85 aa8.43□□□□□ -1.06
CAPN3-220ENST00000569827 INSP01308 110 aa8.43□□□□□ -1.06
CAPN3-220ENST00000569827 AKAIN1P0CW23 69 aa8.43□□□□□ -1.06
CAPN3-220ENST00000569827 ORM2P19652 201 aa8.43□□□□□ -1.06
CAPN3-220ENST00000569827 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
CAPN3-220ENST00000569827 CCR6P51684 374 aa8.43□□□□□ -1.06
CAPN3-220ENST00000569827 KRTAP10-2P60368 255 aa8.43□□□□□ -1.06
CAPN3-220ENST00000569827 DLK1P80370 383 aa8.43□□□□□ -1.06
CAPN3-220ENST00000569827 C1orf194Q5T5A4 169 aa8.43□□□□□ -1.06
CAPN3-220ENST00000569827 SPATA31B1PQ5VZV4 182 aa8.43□□□□□ -1.06
CAPN3-220ENST00000569827 SMIM4Q8WVI0 70 aa8.43□□□□□ -1.06
CAPN3-220ENST00000569827 TRGV9Q99603 122 aa8.43□□□□□ -1.06
CAPN3-220ENST00000569827 PFDN2Q9UHV9 154 aa8.43□□□□□ -1.06
CAPN3-220ENST00000569827 A0A0B4J2A0 478 aa8.42□□□□□ -1.06
CAPN3-220ENST00000569827 ZNF98A6NK75 572 aa8.42□□□□□ -1.06
CAPN3-220ENST00000569827 GPX4P36969 197 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-220ENST00000569827 GALR1P47211 349 aa8.42□□□□□ -1.06
CAPN3-220ENST00000569827 IL18Q14116 193 aa8.42□□□□□ -1.06
CAPN3-220ENST00000569827 SURF2Q15527 256 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-220ENST00000569827 SSX7Q7RTT5 188 aa8.42□□□□□ -1.06
CAPN3-220ENST00000569827 Q8N1X5 172 aa8.42□□□□□ -1.06
CAPN3-220ENST00000569827 THAP8Q8NA92 274 aa8.42□□□□□ -1.06
CAPN3-220ENST00000569827 OR1B1Q8NGR6 318 aa8.42□□□□□ -1.06
CAPN3-220ENST00000569827 IL22RA2Q969J5 263 aa8.42□□□□□ -1.06
CAPN3-220ENST00000569827 SHPKQ9UHJ6 478 aa8.42□□□□□ -1.06
CAPN3-220ENST00000569827 DMBT1Q9UGM3 2413 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-220ENST00000569827 LYRM9A8MSI8 78 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms