RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 CSN3P07498 182 aa17.85■□□□□ 0.45
RAB40C-212ENST00000569575 LYZP61626 148 aa17.85■□□□□ 0.45
RAB40C-212ENST00000569575 C1orf194Q5T5A4 169 aa17.85■□□□□ 0.45
RAB40C-212ENST00000569575 IL34Q6ZMJ4 242 aa17.85■□□□□ 0.45
RAB40C-212ENST00000569575 C9orf62Q8N4C0 152 aa17.85■□□□□ 0.45
RAB40C-212ENST00000569575 OR2K2Q8NGT1 345 aa17.85■□□□□ 0.45
RAB40C-212ENST00000569575 DNAJC4Q9NNZ3 241 aa17.85■□□□□ 0.45
RAB40C-212ENST00000569575 ZMAT5Q9UDW3 170 aaKnown RBP17.85■□□□□ 0.45
RAB40C-212ENST00000569575 U3KQE9 123 aa17.85■□□□□ 0.45
RAB40C-212ENST00000569575 WIPF1O43516 503 aa17.84■□□□□ 0.45
RAB40C-212ENST00000569575 MBP02144 154 aa17.84■□□□□ 0.45
RAB40C-212ENST00000569575 FOLR2P14207 255 aa17.84■□□□□ 0.45
RAB40C-212ENST00000569575 USF2Q15853 346 aaPredicted RBP17.84■□□□□ 0.45
RAB40C-212ENST00000569575 TM4SF20Q53R12 229 aa17.84■□□□□ 0.45
RAB40C-212ENST00000569575 MIC13Q5XKP0 118 aa17.84■□□□□ 0.45
RAB40C-212ENST00000569575 TMEM182Q6ZP80 229 aaPredicted RBP17.84■□□□□ 0.45
RAB40C-212ENST00000569575 PBDC1Q9BVG4 233 aa17.84■□□□□ 0.45
RAB40C-212ENST00000569575 VSIRQ9H7M9 311 aa17.84■□□□□ 0.45
RAB40C-212ENST00000569575 HIGD1AQ9Y241 93 aa17.84■□□□□ 0.45
RAB40C-212ENST00000569575 SEC14L6B5MCN3 397 aa17.83■□□□□ 0.44
RAB40C-212ENST00000569575 TPT1P13693 172 aaKnown RBP17.83■□□□□ 0.44
RAB40C-212ENST00000569575 ORM2P19652 201 aa17.83■□□□□ 0.44
RAB40C-212ENST00000569575 GATA2P23769 480 aaPredicted RBP17.83■□□□□ 0.44
RAB40C-212ENST00000569575 EIF5AL1Q6IS14 154 aaKnown RBP17.83■□□□□ 0.44
RAB40C-212ENST00000569575 SLC51BQ86UW2 128 aa17.83■□□□□ 0.44
RAB40C-212ENST00000569575 STOML3Q8TAV4 291 aa17.83■□□□□ 0.44
RAB40C-212ENST00000569575 GPR82Q96P67 336 aa17.83■□□□□ 0.44
RAB40C-212ENST00000569575 ZNF471Q9BX82 626 aaPredicted RBP17.83■□□□□ 0.44
RAB40C-212ENST00000569575 COX7A2P2O60397 106 aa17.82■□□□□ 0.44
RAB40C-212ENST00000569575 ATP6V0CP27449 155 aa17.82■□□□□ 0.44
RAB40C-212ENST00000569575 HSD17B11Q8NBQ5 300 aa17.82■□□□□ 0.44
RAB40C-212ENST00000569575 OR1B1Q8NGR6 318 aa17.82■□□□□ 0.44
RAB40C-212ENST00000569575 RSG1Q9BU20 258 aa17.82■□□□□ 0.44
RAB40C-212ENST00000569575 TRAV25A0A0B4J276 109 aa17.81■□□□□ 0.44
RAB40C-212ENST00000569575 BUB3O43684 328 aa17.81■□□□□ 0.44
RAB40C-212ENST00000569575 OR5G3P0C626 314 aa17.81■□□□□ 0.44
RAB40C-212ENST00000569575 SEC11BP0C7V7 166 aa17.81■□□□□ 0.44
RAB40C-212ENST00000569575 ACOT6Q3I5F7 207 aaPredicted RBP17.81■□□□□ 0.44
RAB40C-212ENST00000569575 C10orf113Q5VZT2 155 aa17.81■□□□□ 0.44
RAB40C-212ENST00000569575 BAP18Q8IXM2 172 aa17.81■□□□□ 0.44
RAB40C-212ENST00000569575 RHPN1-AS1Q9BWJ2 59 aa17.81■□□□□ 0.44
RAB40C-212ENST00000569575 CHEK1O14757 476 aa17.8■□□□□ 0.44
RAB40C-212ENST00000569575 SAP30O75446 220 aa17.8■□□□□ 0.44
RAB40C-212ENST00000569575 LAMTOR1Q6IAA8 161 aa17.8■□□□□ 0.44
RAB40C-212ENST00000569575 DYNLRB2Q8TF09 96 aa17.8■□□□□ 0.44
RAB40C-212ENST00000569575 HELTA6NFD8 242 aa17.79■□□□□ 0.44
RAB40C-212ENST00000569575 IGLV1-51P01701 117 aa17.79■□□□□ 0.44
RAB40C-212ENST00000569575 SPP1P10451 314 aa17.79■□□□□ 0.44
RAB40C-212ENST00000569575 FFAR4Q5NUL3 377 aa17.79■□□□□ 0.44
RAB40C-212ENST00000569575 SHANK2-AS3Q9BTD1 123 aa17.79■□□□□ 0.44
RAB40C-212ENST00000569575 MRPL32Q9BYC8 188 aaKnown RBP17.79■□□□□ 0.44
RAB40C-212ENST00000569575 SLC25A39Q9BZJ4 359 aaPredicted RBP17.79■□□□□ 0.44
RAB40C-212ENST00000569575 M6PRP20645 277 aa17.78■□□□□ 0.44
RAB40C-212ENST00000569575 TMEM37Q8WXS4 190 aa17.78■□□□□ 0.44
RAB40C-212ENST00000569575 IGHV3OR16-8A0A075B7F1 116 aa17.77■□□□□ 0.44
RAB40C-212ENST00000569575 UMAD1C9J7I0 102 aa17.77■□□□□ 0.44
RAB40C-212ENST00000569575 H3BRN7 92 aa17.77■□□□□ 0.44
RAB40C-212ENST00000569575 DEFB114Q30KQ6 69 aa17.77■□□□□ 0.44
RAB40C-212ENST00000569575 C16orf54Q6UWD8 224 aa17.77■□□□□ 0.44
RAB40C-212ENST00000569575 PATE2Q6UY27 113 aa17.77■□□□□ 0.44
RAB40C-212ENST00000569575 ADAMTSL5Q6ZMM2 481 aa17.77■□□□□ 0.44
RAB40C-212ENST00000569575 LINC00305Q7Z4B0 112 aa17.77■□□□□ 0.44
RAB40C-212ENST00000569575 ZNF98A6NK75 572 aa17.76■□□□□ 0.43
RAB40C-212ENST00000569575 ZNF207O43670 478 aaKnown RBP17.76■□□□□ 0.43
RAB40C-212ENST00000569575 RHOBP62745 196 aa17.76■□□□□ 0.43
RAB40C-212ENST00000569575 LCN12Q6JVE5 192 aa17.76■□□□□ 0.43
RAB40C-212ENST00000569575 SLC25A32Q9H2D1 315 aa17.76■□□□□ 0.43
RAB40C-212ENST00000569575 RPL7P18124 248 aaKnown RBP17.75■□□□□ 0.43
RAB40C-212ENST00000569575 MEOX2P50222 304 aa17.75■□□□□ 0.43
RAB40C-212ENST00000569575 SAMD13Q5VXD3 122 aa17.75■□□□□ 0.43
RAB40C-212ENST00000569575 STXBP6Q8NFX7 210 aa17.75■□□□□ 0.43
RAB40C-212ENST00000569575 ST8SIA2Q92186 375 aa17.75■□□□□ 0.43
RAB40C-212ENST00000569575 PHYHIPLQ96FC7 376 aa17.75■□□□□ 0.43
RAB40C-212ENST00000569575 DOK5Q9P104 306 aa17.75■□□□□ 0.43
RAB40C-212ENST00000569575 PAFAH1B2P68402 229 aa17.74■□□□□ 0.43
RAB40C-212ENST00000569575 RBPMS2Q6ZRY4 209 aaKnown RBP17.74■□□□□ 0.43
RAB40C-212ENST00000569575 OR8I2Q8N0Y5 310 aa17.74■□□□□ 0.43
RAB40C-212ENST00000569575 GLMPQ8WWB7 406 aa17.74■□□□□ 0.43
RAB40C-212ENST00000569575 MLXQ9UH92 298 aa17.74■□□□□ 0.43
RAB40C-212ENST00000569575 TRAV2A0A0B4J234 112 aa17.73■□□□□ 0.43
RAB40C-212ENST00000569575 A0A1W2PPV4 95 aa17.73■□□□□ 0.43
RAB40C-212ENST00000569575 IGLL1P15814 213 aa17.73■□□□□ 0.43
RAB40C-212ENST00000569575 GALR1P47211 349 aa17.73■□□□□ 0.43
RAB40C-212ENST00000569575 RAB5CP51148 216 aa17.73■□□□□ 0.43
RAB40C-212ENST00000569575 TAS2R45P59539 299 aa17.73■□□□□ 0.43
RAB40C-212ENST00000569575 TMEM41BQ5BJD5 291 aa17.73■□□□□ 0.43
RAB40C-212ENST00000569575 AKR1C8PQ5T2L2 129 aa17.73■□□□□ 0.43
RAB40C-212ENST00000569575 FAM78BQ5VT40 261 aa17.73■□□□□ 0.43
RAB40C-212ENST00000569575 FAM90A2PQ658T7 463 aa17.73■□□□□ 0.43
RAB40C-212ENST00000569575 DPPA3Q6W0C5 159 aa17.73■□□□□ 0.43
RAB40C-212ENST00000569575 BPIFA4PQ86YQ2 179 aa17.73■□□□□ 0.43
RAB40C-212ENST00000569575 FUT9Q9Y231 359 aa17.73■□□□□ 0.43
RAB40C-212ENST00000569575 TSPAN4O14817 238 aa17.72■□□□□ 0.43
RAB40C-212ENST00000569575 APOHP02749 345 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-212ENST00000569575 NKX2-5P52952 324 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-212ENST00000569575 OR10G4Q8NGN3 311 aa17.72■□□□□ 0.43
RAB40C-212ENST00000569575 OR10G9Q8NGN4 311 aa17.72■□□□□ 0.43
RAB40C-212ENST00000569575 OR10G7Q8NGN6 311 aa17.72■□□□□ 0.43
RAB40C-212ENST00000569575 SPAG8Q99932 426 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-212ENST00000569575 SH3BGRL3Q9H299 93 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms