RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 SRSF9Q13242 221 aaKnown RBP eCLIP8.82□□□□□ -1
CLK3-226ENST00000569406 Q6ZPA2 131 aa8.82□□□□□ -1
CLK3-226ENST00000569406 AAED1Q7RTV5 226 aa8.82□□□□□ -1
CLK3-226ENST00000569406 FAM168AQ92567 244 aa8.82□□□□□ -1
CLK3-226ENST00000569406 ZNF355PQ9NSJ1 428 aa8.82□□□□□ -1
CLK3-226ENST00000569406 IGKV1-27A0A075B6S5 117 aa8.82□□□□□ -1
CLK3-226ENST00000569406 KIR2DS1A0A191URI9 304 aa8.82□□□□□ -1
CLK3-226ENST00000569406 H3BVH4 76 aa8.82□□□□□ -1
CLK3-226ENST00000569406 TUSC2O75896 110 aa8.82□□□□□ -1
CLK3-226ENST00000569406 KIR2DS1Q14954 304 aa8.82□□□□□ -1
CLK3-226ENST00000569406 PPP1R27Q86WC6 154 aa8.82□□□□□ -1
CLK3-226ENST00000569406 PPDPFLQ8WWR9 84 aa8.82□□□□□ -1
CLK3-226ENST00000569406 CFHR4Q92496 578 aa8.82□□□□□ -1
CLK3-226ENST00000569406 FBXL15Q9H469 300 aa8.82□□□□□ -1
CLK3-226ENST00000569406 HEYLQ9NQ87 328 aaPredicted RBP8.82□□□□□ -1
CLK3-226ENST00000569406 POU2AF1Q16633 256 aa8.82□□□□□ -1
CLK3-226ENST00000569406 Q6ZQT7 251 aa8.82□□□□□ -1
CLK3-226ENST00000569406 TTTY13Q9BZ97 58 aa8.82□□□□□ -1
CLK3-226ENST00000569406 ATMQ13315 3056 aa8.81□□□□□ -1
CLK3-226ENST00000569406 CRLF1O75462 422 aa8.81□□□□□ -1
CLK3-226ENST00000569406 P04436 131 aa8.81□□□□□ -1
CLK3-226ENST00000569406 FAM106CPP0CH98 169 aa8.81□□□□□ -1
CLK3-226ENST00000569406 ACP1P24666 158 aa8.81□□□□□ -1
CLK3-226ENST00000569406 FAM106AQ4KMX7 169 aa8.81□□□□□ -1
CLK3-226ENST00000569406 SLC25A33Q9BSK2 321 aa8.81□□□□□ -1
CLK3-226ENST00000569406 FAM234AQ9H0X4 552 aa8.81□□□□□ -1
CLK3-226ENST00000569406 NBASA2RRP1 2371 aa8.81□□□□□ -1
CLK3-226ENST00000569406 PRRG2O14669 202 aa8.81□□□□□ -1
CLK3-226ENST00000569406 SYNGR3O43761 229 aa8.81□□□□□ -1
CLK3-226ENST00000569406 ZNF688P0C7X2 276 aa8.81□□□□□ -1
CLK3-226ENST00000569406 ZNF32P17041 273 aa8.81□□□□□ -1
CLK3-226ENST00000569406 FKBP2P26885 142 aaKnown RBP8.81□□□□□ -1
CLK3-226ENST00000569406 SSR4P51571 173 aa8.81□□□□□ -1
CLK3-226ENST00000569406 ZNF137PP52743 207 aa8.81□□□□□ -1
CLK3-226ENST00000569406 RPS19BP1Q86WX3 136 aaKnown RBP8.81□□□□□ -1
CLK3-226ENST00000569406 CHCHD1Q96BP2 118 aaKnown RBP8.81□□□□□ -1
CLK3-226ENST00000569406 MSRB2Q9Y3D2 182 aa8.81□□□□□ -1
CLK3-226ENST00000569406 USF3Q68DE3 2245 aa8.81□□□□□ -1
CLK3-226ENST00000569406 FAM90A26D6RGX4 464 aa8.81□□□□□ -1
CLK3-226ENST00000569406 J3KT08 172 aa8.81□□□□□ -1
CLK3-226ENST00000569406 MYOD1P15172 320 aa8.81□□□□□ -1
CLK3-226ENST00000569406 MZT1Q08AG7 82 aa8.81□□□□□ -1
CLK3-226ENST00000569406 TRIP6Q15654 476 aaKnown RBP8.81□□□□□ -1
CLK3-226ENST00000569406 MKXQ8IYA7 352 aa8.81□□□□□ -1
CLK3-226ENST00000569406 ZNF645Q8N7E2 425 aa8.81□□□□□ -1
CLK3-226ENST00000569406 PLPPR2Q96GM1 343 aa8.81□□□□□ -1
CLK3-226ENST00000569406 OSTCQ9NRP0 149 aa8.81□□□□□ -1
CLK3-226ENST00000569406 CADP27708 2225 aa8.8□□□□□ -1
CLK3-226ENST00000569406 TANC2Q9HCD6 1990 aa8.8□□□□□ -1
CLK3-226ENST00000569406 IGKV1D-13A0A0B4J2D9 117 aa8.8□□□□□ -1
CLK3-226ENST00000569406 TMEM262E9PQX1 116 aa8.8□□□□□ -1
CLK3-226ENST00000569406 RRHO14718 337 aa8.8□□□□□ -1
CLK3-226ENST00000569406 CXCL13O43927 109 aa8.8□□□□□ -1
CLK3-226ENST00000569406 IGKV1-13P0DP09 117 aa8.8□□□□□ -1
CLK3-226ENST00000569406 SPINK9Q5DT21 86 aa8.8□□□□□ -1
CLK3-226ENST00000569406 Q6ZR03 302 aa8.8□□□□□ -1
CLK3-226ENST00000569406 TMUB1Q9BVT8 246 aa8.8□□□□□ -1
CLK3-226ENST00000569406 SPANXA1Q9NS26 97 aa8.8□□□□□ -1
CLK3-226ENST00000569406 SIGLEC9Q9Y336 463 aa8.8□□□□□ -1
CLK3-226ENST00000569406 C9JCJ5 164 aa8.8□□□□□ -1
CLK3-226ENST00000569406 NPFFO15130 113 aa8.8□□□□□ -1
CLK3-226ENST00000569406 PDCD6O75340 191 aa8.8□□□□□ -1
CLK3-226ENST00000569406 KLF12Q9Y4X4 402 aa8.8□□□□□ -1
CLK3-226ENST00000569406 PRR14LQ5THK1 2151 aa8.8□□□□□ -1
CLK3-226ENST00000569406 TRAV8-2A0A0B4J237 113 aa8.79□□□□□ -1
CLK3-226ENST00000569406 SMIM27A0A1W2PRY6 76 aa8.79□□□□□ -1
CLK3-226ENST00000569406 LINC01548A6NM66 108 aa8.79□□□□□ -1
CLK3-226ENST00000569406 SP1P08047 785 aa8.79□□□□□ -1
CLK3-226ENST00000569406 COL8A2P25067 703 aa8.79□□□□□ -1
CLK3-226ENST00000569406 PSMB2P49721 201 aa8.79□□□□□ -1
CLK3-226ENST00000569406 ERVK11-1P61568 191 aa8.79□□□□□ -1
CLK3-226ENST00000569406 HES1Q14469 280 aa8.79□□□□□ -1
CLK3-226ENST00000569406 FAM27BQ5VT28 67 aa8.79□□□□□ -1
CLK3-226ENST00000569406 SIGLEC15Q6ZMC9 328 aa8.79□□□□□ -1
CLK3-226ENST00000569406 PHLDA1Q8WV24 401 aaPredicted RBP8.79□□□□□ -1
CLK3-226ENST00000569406 TMEM101Q96IK0 257 aa8.79□□□□□ -1
CLK3-226ENST00000569406 CHCHD5Q9BSY4 110 aa8.79□□□□□ -1
CLK3-226ENST00000569406 CHAC1Q9BUX1 264 aa8.79□□□□□ -1
CLK3-226ENST00000569406 DLL3Q9NYJ7 618 aa8.79□□□□□ -1
CLK3-226ENST00000569406 TRAV8-1A0A0A6YYK1 113 aa8.79□□□□□ -1
CLK3-226ENST00000569406 THBDP07204 575 aa8.79□□□□□ -1
CLK3-226ENST00000569406 FOXG1P55316 489 aaPredicted RBP8.79□□□□□ -1
CLK3-226ENST00000569406 ATP6V0E2Q8NHE4 81 aa8.79□□□□□ -1
CLK3-226ENST00000569406 CARD19Q96LW7 228 aa8.79□□□□□ -1
CLK3-226ENST00000569406 RASL11BQ9BPW5 248 aa8.79□□□□□ -1
CLK3-226ENST00000569406 FAM173AQ9BQD7 235 aa8.79□□□□□ -1
CLK3-226ENST00000569406 TXNDC17Q9BRA2 123 aa8.79□□□□□ -1
CLK3-226ENST00000569406 C21orf62Q9NYP8 219 aa8.79□□□□□ -1
CLK3-226ENST00000569406 IL36RNQ9UBH0 155 aa8.79□□□□□ -1
CLK3-226ENST00000569406 LOC107984156A0A0G2JMH3 177 aa8.79□□□□□ -1
CLK3-226ENST00000569406 OOSP1A8MZH6 123 aa8.79□□□□□ -1
CLK3-226ENST00000569406 SCTP09683 121 aa8.79□□□□□ -1
CLK3-226ENST00000569406 TMEM211Q6ICI0 200 aa8.79□□□□□ -1
CLK3-226ENST00000569406 ARL17AQ8IVW1 177 aa8.79□□□□□ -1
CLK3-226ENST00000569406 C10orf126Q8N4M7 172 aa8.79□□□□□ -1
CLK3-226ENST00000569406 NUP35Q8NFH5 326 aa8.79□□□□□ -1
CLK3-226ENST00000569406 ZDHHC16Q969W1 377 aa8.79□□□□□ -1
CLK3-226ENST00000569406 Q96M66 194 aa8.79□□□□□ -1
CLK3-226ENST00000569406 FZR1Q9UM11 496 aa8.79□□□□□ -1
CLK3-226ENST00000569406 TCRBV4S1A1TA0A5B7 111 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms